Protein–RNA interactions for Protein: P00441

SOD1, Superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1P00441 SNORA40.4-201ENST00000390971 128 ntBASIC1.42□□□□□ -2.18
SOD1P00441 Y_RNA.595-201ENST00000410403 105 ntBASIC1.42□□□□□ -2.18
SOD1P00441 USP9YP33-201ENST00000412220 421 ntBASIC1.42□□□□□ -2.18
SOD1P00441 RPS24P7-201ENST00000416921 246 ntBASIC1.42□□□□□ -2.18
SOD1P00441 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC1.42□□□□□ -2.18
SOD1P00441 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.42□□□□□ -2.18
SOD1P00441 PTGES3P4-201ENST00000426243 356 ntBASIC1.42□□□□□ -2.18
SOD1P00441 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.42□□□□□ -2.18
SOD1P00441 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
SOD1P00441 RPL36AP53-201ENST00000432891 316 ntBASIC1.42□□□□□ -2.18
SOD1P00441 USP9YP35-201ENST00000435696 412 ntBASIC1.42□□□□□ -2.18
SOD1P00441 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.42□□□□□ -2.18
SOD1P00441 BRK1P2-201ENST00000442875 223 ntBASIC1.42□□□□□ -2.18
SOD1P00441 RPL21P134-201ENST00000453468 483 ntBASIC1.42□□□□□ -2.18
SOD1P00441 AC108729.1-201ENST00000487812 947 ntBASIC1.42□□□□□ -2.18
SOD1P00441 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.42□□□□□ -2.18
SOD1P00441 MRPS17P9-201ENST00000511924 393 ntBASIC1.42□□□□□ -2.18
SOD1P00441 RNU6-276P-201ENST00000516114 96 ntBASIC1.42□□□□□ -2.18
SOD1P00441 SNORA19.3-201ENST00000516165 130 ntBASIC1.42□□□□□ -2.18
SOD1P00441 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.42□□□□□ -2.18
SOD1P00441 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.42□□□□□ -2.18
SOD1P00441 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.42□□□□□ -2.18
SOD1P00441 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC1.42□□□□□ -2.18
SOD1P00441 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.42□□□□□ -2.18
SOD1P00441 AP001004.1-201ENST00000582468 324 ntBASIC1.42□□□□□ -2.18
SOD1P00441 AC091057.3-201ENST00000602684 733 ntBASIC1.42□□□□□ -2.18
SOD1P00441 DPPA3P3-201ENST00000603842 430 ntBASIC1.42□□□□□ -2.18
SOD1P00441 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.42□□□□□ -2.18
SOD1P00441 AC007038.2-201ENST00000608095 740 ntBASIC1.42□□□□□ -2.18
SOD1P00441 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.42□□□□□ -2.18
SOD1P00441 AC013470.4-201ENST00000619978 986 ntBASIC1.42□□□□□ -2.18
SOD1P00441 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
SOD1P00441 CDC27P3-201ENST00000635418 1910 ntBASIC1.42□□□□□ -2.18
SOD1P00441 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.42□□□□□ -2.18
SOD1P00441 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
SOD1P00441 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
SOD1P00441 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
SOD1P00441 MTND5P10-201ENST00000603719 1809 ntBASIC1.41□□□□□ -2.18
SOD1P00441 RNU6-1284P-201ENST00000363701 100 ntBASIC1.41□□□□□ -2.18
SOD1P00441 Y_RNA.192-201ENST00000363977 102 ntBASIC1.41□□□□□ -2.18
SOD1P00441 RNU6-748P-201ENST00000384648 107 ntBASIC1.41□□□□□ -2.18
SOD1P00441 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
SOD1P00441 AL136310.1-201ENST00000404926 654 ntBASIC1.41□□□□□ -2.18
SOD1P00441 AL359704.1-201ENST00000411586 781 ntBASIC1.41□□□□□ -2.18
SOD1P00441 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.41□□□□□ -2.18
SOD1P00441 MTATP6P20-201ENST00000414147 562 ntBASIC1.41□□□□□ -2.18
SOD1P00441 TXNL1P1-201ENST00000429528 554 ntBASIC1.41□□□□□ -2.18
SOD1P00441 RPS25P9-201ENST00000435591 252 ntBASIC1.41□□□□□ -2.18
SOD1P00441 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.41□□□□□ -2.18
SOD1P00441 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.41□□□□□ -2.18
SOD1P00441 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.41□□□□□ -2.18
SOD1P00441 AP001324.2-201ENST00000461163 319 ntBASIC1.41□□□□□ -2.18
SOD1P00441 AC107032.1-201ENST00000485945 480 ntBASIC1.41□□□□□ -2.18
SOD1P00441 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.41□□□□□ -2.18
SOD1P00441 AC091163.3-201ENST00000518269 1144 ntBASIC1.41□□□□□ -2.18
SOD1P00441 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC1.41□□□□□ -2.18
SOD1P00441 AL161670.1-201ENST00000554348 137 ntBASIC1.41□□□□□ -2.18
SOD1P00441 AL121821.2-201ENST00000556081 394 ntBASIC1.41□□□□□ -2.18
SOD1P00441 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC1.41□□□□□ -2.18
SOD1P00441 MIR3167-201ENST00000579623 85 ntBASIC1.41□□□□□ -2.18
SOD1P00441 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.41□□□□□ -2.18
SOD1P00441 AL138963.2-201ENST00000605137 226 ntBASIC1.41□□□□□ -2.18
SOD1P00441 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
SOD1P00441 snoU13.31-201ENST00000607291 104 ntBASIC1.41□□□□□ -2.18
SOD1P00441 MIR6134-201ENST00000617606 109 ntBASIC1.41□□□□□ -2.18
SOD1P00441 AC106858.1-201ENST00000637497 429 ntBASIC1.41□□□□□ -2.18
SOD1P00441 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
SOD1P00441 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
SOD1P00441 ZNF702P-202ENST00000434269 1966 ntBASIC1.4□□□□□ -2.19
SOD1P00441 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.4□□□□□ -2.19
SOD1P00441 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
SOD1P00441 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.4□□□□□ -2.19
SOD1P00441 U8.1-201ENST00000362843 134 ntBASIC1.4□□□□□ -2.19
SOD1P00441 RNU6-512P-201ENST00000364438 103 ntBASIC1.4□□□□□ -2.19
SOD1P00441 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
SOD1P00441 RNU6-658P-201ENST00000384606 106 ntBASIC1.4□□□□□ -2.19
SOD1P00441 RNU6-997P-201ENST00000384725 107 ntBASIC1.4□□□□□ -2.19
SOD1P00441 MIR95-201ENST00000385072 81 ntBASIC1.4□□□□□ -2.19
SOD1P00441 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
SOD1P00441 RNU6-1000P-201ENST00000391066 106 ntBASIC1.4□□□□□ -2.19
SOD1P00441 SNORD56-201ENST00000413522 71 ntBASIC1.4□□□□□ -2.19
SOD1P00441 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.4□□□□□ -2.19
SOD1P00441 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.4□□□□□ -2.19
SOD1P00441 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC1.4□□□□□ -2.19
SOD1P00441 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.4□□□□□ -2.19
SOD1P00441 RPL7P34-201ENST00000433316 712 ntBASIC1.4□□□□□ -2.19
SOD1P00441 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.4□□□□□ -2.19
SOD1P00441 AL360221.1-201ENST00000445989 335 ntBASIC1.4□□□□□ -2.19
SOD1P00441 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.4□□□□□ -2.19
SOD1P00441 AC104982.1-201ENST00000478775 574 ntBASIC1.4□□□□□ -2.19
SOD1P00441 AC055855.1-201ENST00000489563 579 ntBASIC1.4□□□□□ -2.19
SOD1P00441 AC139453.3-201ENST00000493276 369 ntBASIC1.4□□□□□ -2.19
SOD1P00441 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.4□□□□□ -2.19
SOD1P00441 RNU6-1183P-201ENST00000517054 60 ntBASIC1.4□□□□□ -2.19
SOD1P00441 RNU6-64P-201ENST00000517119 105 ntBASIC1.4□□□□□ -2.19
SOD1P00441 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.4□□□□□ -2.19
SOD1P00441 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.4□□□□□ -2.19
SOD1P00441 AC079598.5-201ENST00000547460 117 ntBASIC1.4□□□□□ -2.19
SOD1P00441 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.4□□□□□ -2.19
SOD1P00441 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 161.5 ms