Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 LUZP4P1-201ENST00000415420 344 ntBASIC0.91□□□□□ -2.26
TRAV13-1A0A0B4J241 MTCO2P5-201ENST00000422621 426 ntBASIC0.91□□□□□ -2.26
TRAV13-1A0A0B4J241 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC0.91□□□□□ -2.26
TRAV13-1A0A0B4J241 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.91□□□□□ -2.26
TRAV13-1A0A0B4J241 RPL32P28-201ENST00000443577 397 ntBASIC0.91□□□□□ -2.26
TRAV13-1A0A0B4J241 AC017099.1-201ENST00000448261 1028 ntBASIC0.91□□□□□ -2.26
TRAV13-1A0A0B4J241 AC245517.4-201ENST00000448601 281 ntBASIC0.91□□□□□ -2.26
TRAV13-1A0A0B4J241 AC079448.1-201ENST00000449377 373 ntBASIC0.91□□□□□ -2.26
TRAV13-1A0A0B4J241 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC0.91□□□□□ -2.26
TRAV13-1A0A0B4J241 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC0.91□□□□□ -2.26
TRAV13-1A0A0B4J241 AC108729.2-201ENST00000476543 840 ntBASIC0.91□□□□□ -2.26
TRAV13-1A0A0B4J241 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.91□□□□□ -2.26
TRAV13-1A0A0B4J241 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
TRAV13-1A0A0B4J241 RNA5SP445-201ENST00000515889 115 ntBASIC0.91□□□□□ -2.26
TRAV13-1A0A0B4J241 RNU6-678P-201ENST00000516832 109 ntBASIC0.91□□□□□ -2.26
TRAV13-1A0A0B4J241 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.91□□□□□ -2.26
TRAV13-1A0A0B4J241 RNU6-902P-201ENST00000517212 91 ntBASIC0.91□□□□□ -2.26
TRAV13-1A0A0B4J241 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
TRAV13-1A0A0B4J241 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC0.91□□□□□ -2.26
TRAV13-1A0A0B4J241 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.91□□□□□ -2.26
TRAV13-1A0A0B4J241 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.91□□□□□ -2.26
TRAV13-1A0A0B4J241 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.91□□□□□ -2.26
TRAV13-1A0A0B4J241 ZNF72P-201ENST00000425869 1908 ntBASIC0.91□□□□□ -2.26
TRAV13-1A0A0B4J241 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC0.91□□□□□ -2.26
TRAV13-1A0A0B4J241 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.9□□□□□ -2.26
TRAV13-1A0A0B4J241 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.27
TRAV13-1A0A0B4J241 NACAP2-201ENST00000318548 624 ntBASIC0.9□□□□□ -2.27
TRAV13-1A0A0B4J241 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.9□□□□□ -2.27
TRAV13-1A0A0B4J241 RNU4-13P-201ENST00000364019 141 ntBASIC0.9□□□□□ -2.27
TRAV13-1A0A0B4J241 SNORD14D-201ENST00000384390 87 ntBASIC0.9□□□□□ -2.27
TRAV13-1A0A0B4J241 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.9□□□□□ -2.27
TRAV13-1A0A0B4J241 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.9□□□□□ -2.27
TRAV13-1A0A0B4J241 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.9□□□□□ -2.27
TRAV13-1A0A0B4J241 OFD1P7Y-201ENST00000454643 1155 ntBASIC0.9□□□□□ -2.27
TRAV13-1A0A0B4J241 snoU13.8-201ENST00000458890 104 ntBASIC0.9□□□□□ -2.27
TRAV13-1A0A0B4J241 snoU13.9-201ENST00000458927 103 ntBASIC0.9□□□□□ -2.27
TRAV13-1A0A0B4J241 SNORD13-201ENST00000459299 104 ntBASIC0.9□□□□□ -2.27
TRAV13-1A0A0B4J241 MEMO1P3-201ENST00000459811 302 ntBASIC0.9□□□□□ -2.27
TRAV13-1A0A0B4J241 APOA2-205ENST00000468465 421 ntTSL 2 BASIC0.9□□□□□ -2.27
TRAV13-1A0A0B4J241 OR2A41P-201ENST00000473586 105 ntBASIC0.9□□□□□ -2.27
TRAV13-1A0A0B4J241 AC132942.1-201ENST00000486753 483 ntBASIC0.9□□□□□ -2.27
TRAV13-1A0A0B4J241 ACA59.2-201ENST00000517061 156 ntBASIC0.9□□□□□ -2.27
TRAV13-1A0A0B4J241 COPS8P3-201ENST00000526024 482 ntBASIC0.9□□□□□ -2.27
TRAV13-1A0A0B4J241 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC0.9□□□□□ -2.27
TRAV13-1A0A0B4J241 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC0.9□□□□□ -2.27
TRAV13-1A0A0B4J241 RPL21P5-201ENST00000554662 472 ntBASIC0.9□□□□□ -2.27
TRAV13-1A0A0B4J241 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC0.9□□□□□ -2.27
TRAV13-1A0A0B4J241 AC019288.1-201ENST00000557918 224 ntBASIC0.9□□□□□ -2.27
TRAV13-1A0A0B4J241 AC005668.1-201ENST00000571142 476 ntBASIC0.9□□□□□ -2.27
TRAV13-1A0A0B4J241 BNIP3P27-201ENST00000599991 412 ntBASIC0.9□□□□□ -2.27
TRAV13-1A0A0B4J241 AL645939.4-201ENST00000604495 135 ntBASIC0.9□□□□□ -2.27
TRAV13-1A0A0B4J241 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
TRAV13-1A0A0B4J241 MIR7843-201ENST00000622274 79 ntBASIC0.9□□□□□ -2.27
TRAV13-1A0A0B4J241 AC090517.3-201ENST00000625170 141 ntBASIC0.9□□□□□ -2.27
TRAV13-1A0A0B4J241 AC019226.1-201ENST00000625666 515 ntBASIC0.9□□□□□ -2.27
TRAV13-1A0A0B4J241 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.9□□□□□ -2.27
TRAV13-1A0A0B4J241 MIR1322-201ENST00000638013 71 ntBASIC0.9□□□□□ -2.27
TRAV13-1A0A0B4J241 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
TRAV13-1A0A0B4J241 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
TRAV13-1A0A0B4J241 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC0.9□□□□□ -2.27
TRAV13-1A0A0B4J241 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
TRAV13-1A0A0B4J241 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.89□□□□□ -2.27
TRAV13-1A0A0B4J241 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
TRAV13-1A0A0B4J241 RNU1-58P-201ENST00000362413 163 ntBASIC0.89□□□□□ -2.27
TRAV13-1A0A0B4J241 RNU6-1167P-201ENST00000363227 94 ntBASIC0.89□□□□□ -2.27
TRAV13-1A0A0B4J241 RNU6-1164P-201ENST00000364428 107 ntBASIC0.89□□□□□ -2.27
TRAV13-1A0A0B4J241 MIR618-201ENST00000385287 98 ntBASIC0.89□□□□□ -2.27
TRAV13-1A0A0B4J241 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
TRAV13-1A0A0B4J241 SNORA48.1-201ENST00000390879 135 ntBASIC0.89□□□□□ -2.27
TRAV13-1A0A0B4J241 TAF13P2-201ENST00000416876 286 ntBASIC0.89□□□□□ -2.27
TRAV13-1A0A0B4J241 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC0.89□□□□□ -2.27
TRAV13-1A0A0B4J241 CYCSP49-201ENST00000420810 319 ntBASIC0.89□□□□□ -2.27
TRAV13-1A0A0B4J241 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC0.89□□□□□ -2.27
TRAV13-1A0A0B4J241 AC092427.1-201ENST00000439177 601 ntBASIC0.89□□□□□ -2.27
TRAV13-1A0A0B4J241 CR769776.1-201ENST00000441254 787 ntBASIC0.89□□□□□ -2.27
TRAV13-1A0A0B4J241 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC0.89□□□□□ -2.27
TRAV13-1A0A0B4J241 PRELID3BP1-201ENST00000457142 540 ntBASIC0.89□□□□□ -2.27
TRAV13-1A0A0B4J241 RPS15AP36-201ENST00000492022 382 ntBASIC0.89□□□□□ -2.27
TRAV13-1A0A0B4J241 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC0.89□□□□□ -2.27
TRAV13-1A0A0B4J241 MTND5P13-201ENST00000513046 1079 ntBASIC0.89□□□□□ -2.27
TRAV13-1A0A0B4J241 RNU6-586P-201ENST00000517265 104 ntBASIC0.89□□□□□ -2.27
TRAV13-1A0A0B4J241 AP004247.1-201ENST00000531556 1289 ntBASIC0.89□□□□□ -2.27
TRAV13-1A0A0B4J241 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC0.89□□□□□ -2.27
TRAV13-1A0A0B4J241 AC067805.1-201ENST00000559344 470 ntBASIC0.89□□□□□ -2.27
TRAV13-1A0A0B4J241 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC0.89□□□□□ -2.27
TRAV13-1A0A0B4J241 AC103987.3-201ENST00000582071 292 ntBASIC0.89□□□□□ -2.27
TRAV13-1A0A0B4J241 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.89□□□□□ -2.27
TRAV13-1A0A0B4J241 BBIP1P1-201ENST00000602999 279 ntBASIC0.89□□□□□ -2.27
TRAV13-1A0A0B4J241 AL050343.2-201ENST00000607338 280 ntBASIC0.89□□□□□ -2.27
TRAV13-1A0A0B4J241 AC009237.15-201ENST00000610252 501 ntBASIC0.89□□□□□ -2.27
TRAV13-1A0A0B4J241 RMST_6.1-201ENST00000611980 203 ntBASIC0.89□□□□□ -2.27
TRAV13-1A0A0B4J241 TUG1_2.1-201ENST00000614234 87 ntBASIC0.89□□□□□ -2.27
TRAV13-1A0A0B4J241 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
TRAV13-1A0A0B4J241 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC0.89□□□□□ -2.27
TRAV13-1A0A0B4J241 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
TRAV13-1A0A0B4J241 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC0.89□□□□□ -2.27
TRAV13-1A0A0B4J241 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.88□□□□□ -2.27
TRAV13-1A0A0B4J241 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
TRAV13-1A0A0B4J241 SNRPEP3-201ENST00000338402 276 ntBASIC0.88□□□□□ -2.27
TRAV13-1A0A0B4J241 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 202.7 ms