Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC0.94□□□□□ -2.26
TRAV13-1A0A0B4J241 AC092001.1-201ENST00000453012 261 ntBASIC0.94□□□□□ -2.26
TRAV13-1A0A0B4J241 AC112492.4-201ENST00000456549 352 ntBASIC0.94□□□□□ -2.26
TRAV13-1A0A0B4J241 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC0.94□□□□□ -2.26
TRAV13-1A0A0B4J241 MTCYBP35-201ENST00000503630 1137 ntBASIC0.94□□□□□ -2.26
TRAV13-1A0A0B4J241 AKIRIN2P1-201ENST00000505898 352 ntBASIC0.94□□□□□ -2.26
TRAV13-1A0A0B4J241 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.94□□□□□ -2.26
TRAV13-1A0A0B4J241 MTND4P2-201ENST00000507767 1203 ntBASIC0.94□□□□□ -2.26
TRAV13-1A0A0B4J241 AC116337.1-201ENST00000509680 687 ntBASIC0.94□□□□□ -2.26
TRAV13-1A0A0B4J241 RNU6-581P-201ENST00000516214 105 ntBASIC0.94□□□□□ -2.26
TRAV13-1A0A0B4J241 AP005660.1-201ENST00000522972 293 ntBASIC0.94□□□□□ -2.26
TRAV13-1A0A0B4J241 AP003034.1-201ENST00000534621 422 ntBASIC0.94□□□□□ -2.26
TRAV13-1A0A0B4J241 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.94□□□□□ -2.26
TRAV13-1A0A0B4J241 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.94□□□□□ -2.26
TRAV13-1A0A0B4J241 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC0.94□□□□□ -2.26
TRAV13-1A0A0B4J241 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.94□□□□□ -2.26
TRAV13-1A0A0B4J241 AC006338.1-201ENST00000618453 749 ntBASIC0.94□□□□□ -2.26
TRAV13-1A0A0B4J241 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC0.94□□□□□ -2.26
TRAV13-1A0A0B4J241 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.94□□□□□ -2.26
TRAV13-1A0A0B4J241 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC0.94□□□□□ -2.26
TRAV13-1A0A0B4J241 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
TRAV13-1A0A0B4J241 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
TRAV13-1A0A0B4J241 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
TRAV13-1A0A0B4J241 U8.1-201ENST00000362843 134 ntBASIC0.93□□□□□ -2.26
TRAV13-1A0A0B4J241 RNU6-353P-201ENST00000364266 108 ntBASIC0.93□□□□□ -2.26
TRAV13-1A0A0B4J241 RNU6-1078P-201ENST00000364522 103 ntBASIC0.93□□□□□ -2.26
TRAV13-1A0A0B4J241 RNU6-60P-201ENST00000364792 103 ntBASIC0.93□□□□□ -2.26
TRAV13-1A0A0B4J241 RNU6-439P-201ENST00000384188 106 ntBASIC0.93□□□□□ -2.26
TRAV13-1A0A0B4J241 RNU6-939P-201ENST00000384634 107 ntBASIC0.93□□□□□ -2.26
TRAV13-1A0A0B4J241 MIR758-201ENST00000390227 88 ntBASIC0.93□□□□□ -2.26
TRAV13-1A0A0B4J241 TXNP7-201ENST00000406296 293 ntBASIC0.93□□□□□ -2.26
TRAV13-1A0A0B4J241 MIR1262-201ENST00000408276 93 ntBASIC0.93□□□□□ -2.26
TRAV13-1A0A0B4J241 BTF3L4P3-201ENST00000418879 476 ntBASIC0.93□□□□□ -2.26
TRAV13-1A0A0B4J241 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC0.93□□□□□ -2.26
TRAV13-1A0A0B4J241 AC015922.2-201ENST00000435593 184 ntBASIC0.93□□□□□ -2.26
TRAV13-1A0A0B4J241 AL121601.2-201ENST00000438019 707 ntBASIC0.93□□□□□ -2.26
TRAV13-1A0A0B4J241 USP9YP22-201ENST00000438971 294 ntBASIC0.93□□□□□ -2.26
TRAV13-1A0A0B4J241 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.93□□□□□ -2.26
TRAV13-1A0A0B4J241 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.93□□□□□ -2.26
TRAV13-1A0A0B4J241 COX6CP18-201ENST00000448769 222 ntBASIC0.93□□□□□ -2.26
TRAV13-1A0A0B4J241 ARPC3P5-201ENST00000448802 534 ntBASIC0.93□□□□□ -2.26
TRAV13-1A0A0B4J241 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.93□□□□□ -2.26
TRAV13-1A0A0B4J241 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC0.93□□□□□ -2.26
TRAV13-1A0A0B4J241 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC0.93□□□□□ -2.26
TRAV13-1A0A0B4J241 TMEM251P1-201ENST00000503717 318 ntBASIC0.93□□□□□ -2.26
TRAV13-1A0A0B4J241 AC008628.1-201ENST00000508663 265 ntBASIC0.93□□□□□ -2.26
TRAV13-1A0A0B4J241 AC117522.2-201ENST00000510049 657 ntBASIC0.93□□□□□ -2.26
TRAV13-1A0A0B4J241 RNU6-927P-201ENST00000516199 100 ntBASIC0.93□□□□□ -2.26
TRAV13-1A0A0B4J241 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.93□□□□□ -2.26
TRAV13-1A0A0B4J241 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.93□□□□□ -2.26
TRAV13-1A0A0B4J241 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.93□□□□□ -2.26
TRAV13-1A0A0B4J241 MIR4666A-201ENST00000580160 79 ntBASIC0.93□□□□□ -2.26
TRAV13-1A0A0B4J241 MIR3683-201ENST00000580847 82 ntBASIC0.93□□□□□ -2.26
TRAV13-1A0A0B4J241 MIR4513-201ENST00000581077 86 ntBASIC0.93□□□□□ -2.26
TRAV13-1A0A0B4J241 MIR4637-201ENST00000582405 84 ntBASIC0.93□□□□□ -2.26
TRAV13-1A0A0B4J241 RN7SL622P-201ENST00000585292 275 ntBASIC0.93□□□□□ -2.26
TRAV13-1A0A0B4J241 AL390208.1-201ENST00000605885 644 ntBASIC0.93□□□□□ -2.26
TRAV13-1A0A0B4J241 MIR8074-201ENST00000615081 81 ntBASIC0.93□□□□□ -2.26
TRAV13-1A0A0B4J241 AC091965.5-201ENST00000624785 342 ntBASIC0.93□□□□□ -2.26
TRAV13-1A0A0B4J241 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.93□□□□□ -2.26
TRAV13-1A0A0B4J241 SLC10A5P1-201ENST00000379063 1306 ntBASIC0.92□□□□□ -2.26
TRAV13-1A0A0B4J241 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.92□□□□□ -2.26
TRAV13-1A0A0B4J241 RNU6-28P-201ENST00000362378 107 ntBASIC0.92□□□□□ -2.26
TRAV13-1A0A0B4J241 Y_RNA.234-201ENST00000364409 97 ntBASIC0.92□□□□□ -2.26
TRAV13-1A0A0B4J241 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC0.92□□□□□ -2.26
TRAV13-1A0A0B4J241 RNU6-1032P-201ENST00000384100 107 ntBASIC0.92□□□□□ -2.26
TRAV13-1A0A0B4J241 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
TRAV13-1A0A0B4J241 SNORA26.9-201ENST00000391322 122 ntBASIC0.92□□□□□ -2.26
TRAV13-1A0A0B4J241 RNU6-174P-201ENST00000410406 106 ntBASIC0.92□□□□□ -2.26
TRAV13-1A0A0B4J241 RNU2-48P-201ENST00000410694 191 ntBASIC0.92□□□□□ -2.26
TRAV13-1A0A0B4J241 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.92□□□□□ -2.26
TRAV13-1A0A0B4J241 USP9YP35-201ENST00000435696 412 ntBASIC0.92□□□□□ -2.26
TRAV13-1A0A0B4J241 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC0.92□□□□□ -2.26
TRAV13-1A0A0B4J241 AP000949.1-201ENST00000438328 629 ntBASIC0.92□□□□□ -2.26
TRAV13-1A0A0B4J241 RPS15AP9-201ENST00000439856 381 ntBASIC0.92□□□□□ -2.26
TRAV13-1A0A0B4J241 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC0.92□□□□□ -2.26
TRAV13-1A0A0B4J241 AC245102.2-201ENST00000448956 180 ntBASIC0.92□□□□□ -2.26
TRAV13-1A0A0B4J241 AL121594.1-201ENST00000475906 575 ntBASIC0.92□□□□□ -2.26
TRAV13-1A0A0B4J241 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC0.92□□□□□ -2.26
TRAV13-1A0A0B4J241 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC0.92□□□□□ -2.26
TRAV13-1A0A0B4J241 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC0.92□□□□□ -2.26
TRAV13-1A0A0B4J241 RNU1-92P-201ENST00000517017 135 ntBASIC0.92□□□□□ -2.26
TRAV13-1A0A0B4J241 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC0.92□□□□□ -2.26
TRAV13-1A0A0B4J241 RRN3P3-201ENST00000549207 578 ntBASIC0.92□□□□□ -2.26
TRAV13-1A0A0B4J241 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.92□□□□□ -2.26
TRAV13-1A0A0B4J241 AC023813.2-201ENST00000564321 469 ntBASIC0.92□□□□□ -2.26
TRAV13-1A0A0B4J241 ADAM3B-201ENST00000569937 840 ntBASIC0.92□□□□□ -2.26
TRAV13-1A0A0B4J241 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.92□□□□□ -2.26
TRAV13-1A0A0B4J241 CYP2C61P-201ENST00000604072 290 ntBASIC0.92□□□□□ -2.26
TRAV13-1A0A0B4J241 AC087045.1-201ENST00000605856 382 ntBASIC0.92□□□□□ -2.26
TRAV13-1A0A0B4J241 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
TRAV13-1A0A0B4J241 AC002543.1-201ENST00000299783 1954 ntBASIC0.92□□□□□ -2.26
TRAV13-1A0A0B4J241 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.91□□□□□ -2.26
TRAV13-1A0A0B4J241 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
TRAV13-1A0A0B4J241 AP005901.5-201ENST00000545779 1796 ntBASIC0.91□□□□□ -2.26
TRAV13-1A0A0B4J241 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
TRAV13-1A0A0B4J241 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
TRAV13-1A0A0B4J241 DHFRP6-201ENST00000401776 268 ntBASIC0.91□□□□□ -2.26
TRAV13-1A0A0B4J241 RNA5SP100-201ENST00000410903 110 ntBASIC0.91□□□□□ -2.26
TRAV13-1A0A0B4J241 RNA5SP59-201ENST00000410922 110 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 164 ms