Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.91■□□□□ 0.94
COL1A2P08123 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL1A2P08123 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.91■□□□□ 0.94
COL1A2P08123 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
COL1A2P08123 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
COL1A2P08123 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL1A2P08123 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.9■□□□□ 0.94
COL1A2P08123 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.9■□□□□ 0.94
COL1A2P08123 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
COL1A2P08123 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COL1A2P08123 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL1A2P08123 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL1A2P08123 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.9■□□□□ 0.94
COL1A2P08123 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.9■□□□□ 0.94
COL1A2P08123 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.9■□□□□ 0.94
COL1A2P08123 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL1A2P08123 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL1A2P08123 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
COL1A2P08123 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
COL1A2P08123 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.9■□□□□ 0.94
COL1A2P08123 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COL1A2P08123 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
COL1A2P08123 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
COL1A2P08123 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
COL1A2P08123 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
COL1A2P08123 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
COL1A2P08123 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL1A2P08123 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
COL1A2P08123 FAM86EP-206ENST00000510506 987 ntBASIC20.89■□□□□ 0.93
COL1A2P08123 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL1A2P08123 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
COL1A2P08123 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.89■□□□□ 0.93
COL1A2P08123 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.89■□□□□ 0.93
COL1A2P08123 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.89■□□□□ 0.93
COL1A2P08123 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.89■□□□□ 0.93
COL1A2P08123 AP000550.4-202ENST00000639755 178 ntBASIC20.89■□□□□ 0.93
COL1A2P08123 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL1A2P08123 FEM1AP3-201ENST00000403722 1741 ntBASIC20.89■□□□□ 0.93
COL1A2P08123 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL1A2P08123 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
COL1A2P08123 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
COL1A2P08123 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL1A2P08123 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL1A2P08123 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
COL1A2P08123 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.89■□□□□ 0.93
COL1A2P08123 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
COL1A2P08123 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL1A2P08123 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
COL1A2P08123 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.89■□□□□ 0.93
COL1A2P08123 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL1A2P08123 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COL1A2P08123 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.88■□□□□ 0.93
COL1A2P08123 AC112907.2-201ENST00000448639 330 ntBASIC20.88■□□□□ 0.93
COL1A2P08123 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.88■□□□□ 0.93
COL1A2P08123 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.88■□□□□ 0.93
COL1A2P08123 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.88■□□□□ 0.93
COL1A2P08123 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COL1A2P08123 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COL1A2P08123 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL1A2P08123 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL1A2P08123 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COL1A2P08123 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.88■□□□□ 0.93
COL1A2P08123 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
COL1A2P08123 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL1A2P08123 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COL1A2P08123 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL1A2P08123 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.87■□□□□ 0.93
COL1A2P08123 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COL1A2P08123 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COL1A2P08123 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COL1A2P08123 SPDYE15P-201ENST00000424157 909 ntBASIC20.87■□□□□ 0.93
COL1A2P08123 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COL1A2P08123 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.87■□□□□ 0.93
COL1A2P08123 AC083849.1-201ENST00000615227 514 ntBASIC20.87■□□□□ 0.93
COL1A2P08123 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COL1A2P08123 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
COL1A2P08123 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COL1A2P08123 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.87■□□□□ 0.93
COL1A2P08123 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL1A2P08123 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
COL1A2P08123 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.87■□□□□ 0.93
COL1A2P08123 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.87■□□□□ 0.93
COL1A2P08123 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL1A2P08123 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL1A2P08123 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
COL1A2P08123 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
COL1A2P08123 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
COL1A2P08123 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
COL1A2P08123 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL1A2P08123 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.87■□□□□ 0.93
COL1A2P08123 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.87■□□□□ 0.93
COL1A2P08123 AC141586.3-201ENST00000562166 1838 ntBASIC20.87■□□□□ 0.93
COL1A2P08123 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL1A2P08123 AL109659.2-201ENST00000606809 1674 ntBASIC20.86■□□□□ 0.93
COL1A2P08123 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL1A2P08123 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
COL1A2P08123 AC034232.1-201ENST00000506026 1064 ntBASIC20.86■□□□□ 0.93
COL1A2P08123 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.86■□□□□ 0.93
COL1A2P08123 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.86■□□□□ 0.93
COL1A2P08123 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms