Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
TMEM88BA6NKF7 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.03□□□□□ -1.6
TMEM88BA6NKF7 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
TMEM88BA6NKF7 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TMEM88BA6NKF7 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
TMEM88BA6NKF7 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TMEM88BA6NKF7 SRP72P2-201ENST00000344851 1979 ntBASIC5.02□□□□□ -1.61
TMEM88BA6NKF7 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TMEM88BA6NKF7 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TMEM88BA6NKF7 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TMEM88BA6NKF7 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TMEM88BA6NKF7 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TMEM88BA6NKF7 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC5.02□□□□□ -1.61
TMEM88BA6NKF7 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
TMEM88BA6NKF7 Y_RNA.153-201ENST00000363615 91 ntBASIC5.02□□□□□ -1.61
TMEM88BA6NKF7 RNU6-595P-201ENST00000363944 107 ntBASIC5.02□□□□□ -1.61
TMEM88BA6NKF7 RNU4-42P-201ENST00000364738 142 ntBASIC5.02□□□□□ -1.61
TMEM88BA6NKF7 SNORA5A-201ENST00000384111 134 ntBASIC5.02□□□□□ -1.61
TMEM88BA6NKF7 BTF3L4P2-201ENST00000392798 346 ntBASIC5.02□□□□□ -1.61
TMEM88BA6NKF7 MTND3P9-201ENST00000429526 346 ntBASIC5.02□□□□□ -1.61
TMEM88BA6NKF7 AC092423.1-201ENST00000430165 186 ntBASIC5.02□□□□□ -1.61
TMEM88BA6NKF7 HMGN2P31-201ENST00000432430 273 ntBASIC5.02□□□□□ -1.61
TMEM88BA6NKF7 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC5.02□□□□□ -1.61
TMEM88BA6NKF7 RPS3AP46-201ENST00000448352 682 ntBASIC5.02□□□□□ -1.61
TMEM88BA6NKF7 MTCO3P8-201ENST00000453691 755 ntBASIC5.02□□□□□ -1.61
TMEM88BA6NKF7 RN7SKP210-201ENST00000459176 261 ntBASIC5.02□□□□□ -1.61
TMEM88BA6NKF7 snoU109.2-201ENST00000459316 135 ntBASIC5.02□□□□□ -1.61
TMEM88BA6NKF7 CREM-226ENST00000469949 721 ntTSL 3 BASIC5.02□□□□□ -1.61
TMEM88BA6NKF7 RPL23AP49-201ENST00000492925 468 ntBASIC5.02□□□□□ -1.61
TMEM88BA6NKF7 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC5.02□□□□□ -1.61
TMEM88BA6NKF7 RNU1-103P-201ENST00000516502 125 ntBASIC5.02□□□□□ -1.61
TMEM88BA6NKF7 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC5.02□□□□□ -1.61
TMEM88BA6NKF7 IGKV2OR2-8-201ENST00000558710 300 ntBASIC5.02□□□□□ -1.61
TMEM88BA6NKF7 MIR5696-201ENST00000578474 85 ntBASIC5.02□□□□□ -1.61
TMEM88BA6NKF7 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
TMEM88BA6NKF7 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
TMEM88BA6NKF7 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
TMEM88BA6NKF7 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TMEM88BA6NKF7 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TMEM88BA6NKF7 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
TMEM88BA6NKF7 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.01□□□□□ -1.61
TMEM88BA6NKF7 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
TMEM88BA6NKF7 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TMEM88BA6NKF7 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
TMEM88BA6NKF7 RNU6-78P-201ENST00000362897 107 ntBASIC5.01□□□□□ -1.61
TMEM88BA6NKF7 RNU6-527P-201ENST00000363425 104 ntBASIC5.01□□□□□ -1.61
TMEM88BA6NKF7 RNU6-213P-201ENST00000384051 104 ntBASIC5.01□□□□□ -1.61
TMEM88BA6NKF7 MIR888-201ENST00000401186 77 ntBASIC5.01□□□□□ -1.61
TMEM88BA6NKF7 RN7SKP156-201ENST00000410308 342 ntBASIC5.01□□□□□ -1.61
TMEM88BA6NKF7 RNU6-1245P-201ENST00000411130 106 ntBASIC5.01□□□□□ -1.61
TMEM88BA6NKF7 RPS4XP13-201ENST00000483219 789 ntBASIC5.01□□□□□ -1.61
TMEM88BA6NKF7 RNU6-911P-201ENST00000516523 104 ntBASIC5.01□□□□□ -1.61
TMEM88BA6NKF7 RNU6-1183P-201ENST00000517054 60 ntBASIC5.01□□□□□ -1.61
TMEM88BA6NKF7 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC5.01□□□□□ -1.61
TMEM88BA6NKF7 AC006600.1-201ENST00000572529 153 ntBASIC5.01□□□□□ -1.61
TMEM88BA6NKF7 AC005046.1-201ENST00000608515 625 ntBASIC5.01□□□□□ -1.61
TMEM88BA6NKF7 AL021879.1-201ENST00000611756 288 ntBASIC5.01□□□□□ -1.61
TMEM88BA6NKF7 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC5.01□□□□□ -1.61
TMEM88BA6NKF7 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
TMEM88BA6NKF7 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
TMEM88BA6NKF7 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TMEM88BA6NKF7 CUL1P1-201ENST00000509510 2425 ntBASIC5.01□□□□□ -1.61
TMEM88BA6NKF7 AC066616.2-201ENST00000559334 1481 ntBASIC5□□□□□ -1.61
TMEM88BA6NKF7 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TMEM88BA6NKF7 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5□□□□□ -1.61
TMEM88BA6NKF7 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
TMEM88BA6NKF7 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TMEM88BA6NKF7 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5□□□□□ -1.61
TMEM88BA6NKF7 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
TMEM88BA6NKF7 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC5□□□□□ -1.61
TMEM88BA6NKF7 RNU6-428P-201ENST00000362942 107 ntBASIC5□□□□□ -1.61
TMEM88BA6NKF7 ACEA_U3.1-201ENST00000363057 217 ntBASIC5□□□□□ -1.61
TMEM88BA6NKF7 RNU6-238P-201ENST00000363313 106 ntBASIC5□□□□□ -1.61
TMEM88BA6NKF7 SNORA5.1-201ENST00000384275 131 ntBASIC5□□□□□ -1.61
TMEM88BA6NKF7 Y_RNA.485-201ENST00000384395 102 ntBASIC5□□□□□ -1.61
TMEM88BA6NKF7 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC5□□□□□ -1.61
TMEM88BA6NKF7 SNORA69.1-201ENST00000390904 137 ntBASIC5□□□□□ -1.61
TMEM88BA6NKF7 RPS29P13-201ENST00000402041 169 ntBASIC5□□□□□ -1.61
TMEM88BA6NKF7 MIR1252-201ENST00000408861 65 ntBASIC5□□□□□ -1.61
TMEM88BA6NKF7 AC079809.1-201ENST00000415468 276 ntBASIC5□□□□□ -1.61
TMEM88BA6NKF7 TRAPPC2P4-201ENST00000421750 331 ntBASIC5□□□□□ -1.61
TMEM88BA6NKF7 FTH1P6-201ENST00000430768 320 ntBASIC5□□□□□ -1.61
TMEM88BA6NKF7 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC5□□□□□ -1.61
TMEM88BA6NKF7 RPL23AP81-201ENST00000455252 467 ntBASIC5□□□□□ -1.61
TMEM88BA6NKF7 RNA5SP246-201ENST00000458909 119 ntBASIC5□□□□□ -1.61
TMEM88BA6NKF7 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC5□□□□□ -1.61
TMEM88BA6NKF7 RPL30P10-201ENST00000488148 337 ntBASIC5□□□□□ -1.61
TMEM88BA6NKF7 MTND4LP22-201ENST00000508209 276 ntBASIC5□□□□□ -1.61
TMEM88BA6NKF7 AC009812.2-201ENST00000517657 457 ntBASIC5□□□□□ -1.61
TMEM88BA6NKF7 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC5□□□□□ -1.61
TMEM88BA6NKF7 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC5□□□□□ -1.61
TMEM88BA6NKF7 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC5□□□□□ -1.61
TMEM88BA6NKF7 NACAP3-201ENST00000552100 481 ntBASIC5□□□□□ -1.61
TMEM88BA6NKF7 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC5□□□□□ -1.61
TMEM88BA6NKF7 AC009852.2-201ENST00000567898 485 ntBASIC5□□□□□ -1.61
TMEM88BA6NKF7 RPS29P30-201ENST00000600975 111 ntBASIC5□□□□□ -1.61
TMEM88BA6NKF7 AL158827.2-201ENST00000602494 330 ntBASIC5□□□□□ -1.61
TMEM88BA6NKF7 NAA50-211ENST00000630058 177 ntTSL 5 BASIC5□□□□□ -1.61
TMEM88BA6NKF7 AL691447.3-201ENST00000635020 330 ntBASIC5□□□□□ -1.61
TMEM88BA6NKF7 U6.105-201ENST00000637379 88 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 214.6 ms