Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.81□□□□□ -1.8
PNKPQ96T60 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
PNKPQ96T60 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
PNKPQ96T60 AC007685.1-201ENST00000329806 452 ntBASIC3.81□□□□□ -1.8
PNKPQ96T60 Y_RNA.162-201ENST00000363683 102 ntBASIC3.81□□□□□ -1.8
PNKPQ96T60 RNU6-43P-201ENST00000384302 107 ntBASIC3.81□□□□□ -1.8
PNKPQ96T60 RNU6-1297P-201ENST00000384415 104 ntBASIC3.81□□□□□ -1.8
PNKPQ96T60 RNU6-393P-201ENST00000384475 107 ntBASIC3.81□□□□□ -1.8
PNKPQ96T60 TOMM22P1-201ENST00000418578 312 ntBASIC3.81□□□□□ -1.8
PNKPQ96T60 AL669831.1-202ENST00000428504 417 ntBASIC3.81□□□□□ -1.8
PNKPQ96T60 GTF2IP13-201ENST00000438487 386 ntBASIC3.81□□□□□ -1.8
PNKPQ96T60 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.81□□□□□ -1.8
PNKPQ96T60 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.81□□□□□ -1.8
PNKPQ96T60 AC107399.1-201ENST00000451226 265 ntBASIC3.81□□□□□ -1.8
PNKPQ96T60 Y_RNA.635-201ENST00000459041 101 ntBASIC3.81□□□□□ -1.8
PNKPQ96T60 SNORD108-201ENST00000459332 71 ntBASIC3.81□□□□□ -1.8
PNKPQ96T60 TRBV1-201ENST00000476502 284 ntBASIC3.81□□□□□ -1.8
PNKPQ96T60 RPS4XP22-201ENST00000480755 780 ntBASIC3.81□□□□□ -1.8
PNKPQ96T60 VN1R104P-201ENST00000505115 1009 ntBASIC3.81□□□□□ -1.8
PNKPQ96T60 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.81□□□□□ -1.8
PNKPQ96T60 SNORA31.3-201ENST00000516029 96 ntBASIC3.81□□□□□ -1.8
PNKPQ96T60 RNU2-69P-201ENST00000516061 100 ntBASIC3.81□□□□□ -1.8
PNKPQ96T60 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.81□□□□□ -1.8
PNKPQ96T60 Y_RNA.718-201ENST00000517110 102 ntBASIC3.81□□□□□ -1.8
PNKPQ96T60 SNORA31.20-201ENST00000517111 133 ntBASIC3.81□□□□□ -1.8
PNKPQ96T60 RNA5SP454-201ENST00000517231 127 ntBASIC3.81□□□□□ -1.8
PNKPQ96T60 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.81□□□□□ -1.8
PNKPQ96T60 AP004371.1-201ENST00000525240 214 ntBASIC3.81□□□□□ -1.8
PNKPQ96T60 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.81□□□□□ -1.8
PNKPQ96T60 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.81□□□□□ -1.8
PNKPQ96T60 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.81□□□□□ -1.8
PNKPQ96T60 AC090115.3-201ENST00000553218 849 ntBASIC3.81□□□□□ -1.8
PNKPQ96T60 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.81□□□□□ -1.8
PNKPQ96T60 FAM60BP-201ENST00000578364 658 ntBASIC3.81□□□□□ -1.8
PNKPQ96T60 AC022893.3-201ENST00000607665 437 ntBASIC3.81□□□□□ -1.8
PNKPQ96T60 U2.17-201ENST00000611454 95 ntBASIC3.81□□□□□ -1.8
PNKPQ96T60 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.81□□□□□ -1.8
PNKPQ96T60 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.81□□□□□ -1.8
PNKPQ96T60 AC119674.1-207ENST00000641355 633 ntBASIC3.81□□□□□ -1.8
PNKPQ96T60 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
PNKPQ96T60 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PNKPQ96T60 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
PNKPQ96T60 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.81□□□□□ -1.8
PNKPQ96T60 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
PNKPQ96T60 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
PNKPQ96T60 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.8□□□□□ -1.8
PNKPQ96T60 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PNKPQ96T60 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.8□□□□□ -1.8
PNKPQ96T60 MTHFD2P2-201ENST00000407725 247 ntBASIC3.8□□□□□ -1.8
PNKPQ96T60 AC074085.1-201ENST00000413598 418 ntBASIC3.8□□□□□ -1.8
PNKPQ96T60 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.8□□□□□ -1.8
PNKPQ96T60 AL591212.2-201ENST00000433923 257 ntBASIC3.8□□□□□ -1.8
PNKPQ96T60 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.8□□□□□ -1.8
PNKPQ96T60 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
PNKPQ96T60 BRK1P2-201ENST00000442875 223 ntBASIC3.8□□□□□ -1.8
PNKPQ96T60 CYCSP35-201ENST00000451978 304 ntBASIC3.8□□□□□ -1.8
PNKPQ96T60 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.8□□□□□ -1.8
PNKPQ96T60 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.8□□□□□ -1.8
PNKPQ96T60 RN7SKP24-201ENST00000515888 284 ntBASIC3.8□□□□□ -1.8
PNKPQ96T60 COPS8P3-201ENST00000526024 482 ntBASIC3.8□□□□□ -1.8
PNKPQ96T60 AP005639.2-201ENST00000527592 928 ntBASIC3.8□□□□□ -1.8
PNKPQ96T60 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.8□□□□□ -1.8
PNKPQ96T60 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.8□□□□□ -1.8
PNKPQ96T60 AC020661.2-201ENST00000560114 134 ntBASIC3.8□□□□□ -1.8
PNKPQ96T60 SNORD84-203ENST00000584275 78 ntBASIC3.8□□□□□ -1.8
PNKPQ96T60 AL161756.2-201ENST00000604597 246 ntBASIC3.8□□□□□ -1.8
PNKPQ96T60 AC096577.2-201ENST00000611455 153 ntBASIC3.8□□□□□ -1.8
PNKPQ96T60 AC090971.5-201ENST00000621102 293 ntBASIC3.8□□□□□ -1.8
PNKPQ96T60 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PNKPQ96T60 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PNKPQ96T60 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PNKPQ96T60 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
PNKPQ96T60 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
PNKPQ96T60 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
PNKPQ96T60 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PNKPQ96T60 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.79□□□□□ -1.8
PNKPQ96T60 AL365440.1-201ENST00000436135 2167 ntBASIC3.79□□□□□ -1.8
PNKPQ96T60 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.79□□□□□ -1.8
PNKPQ96T60 RNU1-75P-201ENST00000347264 129 ntBASIC3.79□□□□□ -1.8
PNKPQ96T60 MIR369-201ENST00000362155 70 ntBASIC3.79□□□□□ -1.8
PNKPQ96T60 Y_RNA.315-201ENST00000365117 102 ntBASIC3.79□□□□□ -1.8
PNKPQ96T60 RNU6-1279P-201ENST00000383917 103 ntBASIC3.79□□□□□ -1.8
PNKPQ96T60 Y_RNA.399-201ENST00000383955 105 ntBASIC3.79□□□□□ -1.8
PNKPQ96T60 RNU6-692P-201ENST00000384496 107 ntBASIC3.79□□□□□ -1.8
PNKPQ96T60 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
PNKPQ96T60 MIR450B-201ENST00000401182 78 ntBASIC3.79□□□□□ -1.8
PNKPQ96T60 AL139397.2-201ENST00000404529 772 ntBASIC3.79□□□□□ -1.8
PNKPQ96T60 RPS4XP7-201ENST00000406274 780 ntBASIC3.79□□□□□ -1.8
PNKPQ96T60 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.79□□□□□ -1.8
PNKPQ96T60 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.79□□□□□ -1.8
PNKPQ96T60 MTCO2P27-201ENST00000420740 428 ntBASIC3.79□□□□□ -1.8
PNKPQ96T60 AL160275.3-201ENST00000423876 471 ntBASIC3.79□□□□□ -1.8
PNKPQ96T60 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.79□□□□□ -1.8
PNKPQ96T60 AP000907.1-201ENST00000428428 510 ntBASIC3.79□□□□□ -1.8
PNKPQ96T60 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.79□□□□□ -1.8
PNKPQ96T60 RPS3AP12-201ENST00000443616 753 ntBASIC3.79□□□□□ -1.8
PNKPQ96T60 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PNKPQ96T60 RPL21P23-201ENST00000446654 460 ntBASIC3.79□□□□□ -1.8
PNKPQ96T60 RNU6-953P-201ENST00000459154 107 ntBASIC3.79□□□□□ -1.8
PNKPQ96T60 RNU7-167P-201ENST00000459160 62 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 245.8 ms