Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.47□□□□□ -2.01
HDAC3O15379 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.47□□□□□ -2.01
HDAC3O15379 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
HDAC3O15379 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
HDAC3O15379 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.47□□□□□ -2.01
HDAC3O15379 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
HDAC3O15379 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.47□□□□□ -2.01
HDAC3O15379 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
HDAC3O15379 AL137003.2-201ENST00000606924 2538 ntBASIC2.46□□□□□ -2.01
HDAC3O15379 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.46□□□□□ -2.01
HDAC3O15379 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
HDAC3O15379 SDAD1P2-201ENST00000441308 2028 ntBASIC2.46□□□□□ -2.02
HDAC3O15379 AC005832.2-201ENST00000538921 1430 ntBASIC2.46□□□□□ -2.02
HDAC3O15379 RNU5A-8P-201ENST00000364102 114 ntBASIC2.46□□□□□ -2.02
HDAC3O15379 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.46□□□□□ -2.02
HDAC3O15379 Y_RNA.582-201ENST00000391023 95 ntBASIC2.46□□□□□ -2.02
HDAC3O15379 AL513475.1-201ENST00000406602 315 ntBASIC2.46□□□□□ -2.02
HDAC3O15379 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.46□□□□□ -2.02
HDAC3O15379 AC096664.2-201ENST00000411843 406 ntBASIC2.46□□□□□ -2.02
HDAC3O15379 ELOCP17-201ENST00000414751 326 ntBASIC2.46□□□□□ -2.02
HDAC3O15379 BX295541.1-201ENST00000417774 250 ntBASIC2.46□□□□□ -2.02
HDAC3O15379 C1DP2-201ENST00000418167 426 ntBASIC2.46□□□□□ -2.02
HDAC3O15379 ISCA1P6-201ENST00000427740 390 ntBASIC2.46□□□□□ -2.02
HDAC3O15379 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.46□□□□□ -2.02
HDAC3O15379 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.46□□□□□ -2.02
HDAC3O15379 AL358934.1-201ENST00000432346 324 ntBASIC2.46□□□□□ -2.02
HDAC3O15379 AC090774.1-201ENST00000435925 246 ntBASIC2.46□□□□□ -2.02
HDAC3O15379 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.46□□□□□ -2.02
HDAC3O15379 TIMM9P1-201ENST00000436122 256 ntBASIC2.46□□□□□ -2.02
HDAC3O15379 AL445687.1-201ENST00000439946 251 ntBASIC2.46□□□□□ -2.02
HDAC3O15379 AL135938.1-201ENST00000443141 297 ntBASIC2.46□□□□□ -2.02
HDAC3O15379 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.46□□□□□ -2.02
HDAC3O15379 AC079448.1-201ENST00000449377 373 ntBASIC2.46□□□□□ -2.02
HDAC3O15379 AC233279.1-201ENST00000455300 423 ntBASIC2.46□□□□□ -2.02
HDAC3O15379 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.46□□□□□ -2.02
HDAC3O15379 snoU109.1-201ENST00000459339 135 ntBASIC2.46□□□□□ -2.02
HDAC3O15379 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.46□□□□□ -2.02
HDAC3O15379 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.46□□□□□ -2.02
HDAC3O15379 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.46□□□□□ -2.02
HDAC3O15379 VN1R104P-201ENST00000505115 1009 ntBASIC2.46□□□□□ -2.02
HDAC3O15379 AF213884.2-201ENST00000510417 903 ntBASIC2.46□□□□□ -2.02
HDAC3O15379 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.46□□□□□ -2.02
HDAC3O15379 Y_RNA.672-201ENST00000516289 104 ntBASIC2.46□□□□□ -2.02
HDAC3O15379 SNORA31.22-201ENST00000517204 135 ntBASIC2.46□□□□□ -2.02
HDAC3O15379 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.46□□□□□ -2.02
HDAC3O15379 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.46□□□□□ -2.02
HDAC3O15379 DEFB108D-201ENST00000527787 222 ntBASIC2.46□□□□□ -2.02
HDAC3O15379 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.46□□□□□ -2.02
HDAC3O15379 AC243972.3-201ENST00000539655 198 ntBASIC2.46□□□□□ -2.02
HDAC3O15379 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.46□□□□□ -2.02
HDAC3O15379 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.46□□□□□ -2.02
HDAC3O15379 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.46□□□□□ -2.02
HDAC3O15379 MIR3146-201ENST00000580367 79 ntBASIC2.46□□□□□ -2.02
HDAC3O15379 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.46□□□□□ -2.02
HDAC3O15379 AL451007.1-201ENST00000595491 289 ntBASIC2.46□□□□□ -2.02
HDAC3O15379 AC068790.3-201ENST00000602988 553 ntBASIC2.46□□□□□ -2.02
HDAC3O15379 AL359999.1-201ENST00000604513 294 ntBASIC2.46□□□□□ -2.02
HDAC3O15379 AP000860.1-201ENST00000605250 559 ntBASIC2.46□□□□□ -2.02
HDAC3O15379 AC007038.2-201ENST00000608095 740 ntBASIC2.46□□□□□ -2.02
HDAC3O15379 AC108479.2-201ENST00000617314 601 ntBASIC2.46□□□□□ -2.02
HDAC3O15379 AL603758.1-201ENST00000618654 241 ntBASIC2.46□□□□□ -2.02
HDAC3O15379 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
HDAC3O15379 AL136313.1-201ENST00000624804 202 ntBASIC2.46□□□□□ -2.02
HDAC3O15379 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
HDAC3O15379 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.46□□□□□ -2.02
HDAC3O15379 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
HDAC3O15379 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.46□□□□□ -2.02
HDAC3O15379 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
HDAC3O15379 AC009812.4-201ENST00000569134 1805 ntBASIC2.45□□□□□ -2.02
HDAC3O15379 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.45□□□□□ -2.02
HDAC3O15379 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
HDAC3O15379 AC131280.1-202ENST00000624067 4211 ntBASIC2.45□□□□□ -2.02
HDAC3O15379 RNU1-39P-201ENST00000383897 165 ntBASIC2.45□□□□□ -2.02
HDAC3O15379 RNU6-637P-201ENST00000384050 107 ntBASIC2.45□□□□□ -2.02
HDAC3O15379 SNORA44-201ENST00000384584 132 ntBASIC2.45□□□□□ -2.02
HDAC3O15379 RNU6-648P-201ENST00000410190 107 ntBASIC2.45□□□□□ -2.02
HDAC3O15379 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.45□□□□□ -2.02
HDAC3O15379 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.45□□□□□ -2.02
HDAC3O15379 MTCO1P39-201ENST00000426148 480 ntBASIC2.45□□□□□ -2.02
HDAC3O15379 RPL31P35-201ENST00000431058 377 ntBASIC2.45□□□□□ -2.02
HDAC3O15379 IPO7P1-201ENST00000442031 636 ntBASIC2.45□□□□□ -2.02
HDAC3O15379 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.45□□□□□ -2.02
HDAC3O15379 AC105252.1-201ENST00000503089 286 ntBASIC2.45□□□□□ -2.02
HDAC3O15379 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.45□□□□□ -2.02
HDAC3O15379 AC091133.4-201ENST00000511142 308 ntBASIC2.45□□□□□ -2.02
HDAC3O15379 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.45□□□□□ -2.02
HDAC3O15379 AC026801.2-201ENST00000515352 425 ntBASIC2.45□□□□□ -2.02
HDAC3O15379 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.45□□□□□ -2.02
HDAC3O15379 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.45□□□□□ -2.02
HDAC3O15379 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.45□□□□□ -2.02
HDAC3O15379 MIR4293-201ENST00000584305 78 ntBASIC2.45□□□□□ -2.02
HDAC3O15379 AL160281.1-201ENST00000605307 311 ntBASIC2.45□□□□□ -2.02
HDAC3O15379 RNU6-87P-201ENST00000607561 108 ntBASIC2.45□□□□□ -2.02
HDAC3O15379 AF250324.2-201ENST00000608299 610 ntBASIC2.45□□□□□ -2.02
HDAC3O15379 AL137847.3-201ENST00000611521 109 ntBASIC2.45□□□□□ -2.02
HDAC3O15379 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.45□□□□□ -2.02
HDAC3O15379 AL449363.1-201ENST00000617815 186 ntBASIC2.45□□□□□ -2.02
HDAC3O15379 PISRT1-201ENST00000626175 531 ntBASIC2.45□□□□□ -2.02
HDAC3O15379 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.45□□□□□ -2.02
HDAC3O15379 AC068137.3-201ENST00000639191 341 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 206.1 ms