Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 AC005000.2-201ENST00000605468 310 ntBASIC2.51□□□□□ -2.01
HDAC3O15379 NDUFA8P1-201ENST00000605525 367 ntBASIC2.51□□□□□ -2.01
HDAC3O15379 OR10AB1P-201ENST00000609613 938 ntBASIC2.51□□□□□ -2.01
HDAC3O15379 AC091304.9-201ENST00000612091 226 ntBASIC2.51□□□□□ -2.01
HDAC3O15379 AC087241.4-201ENST00000612441 480 ntBASIC2.51□□□□□ -2.01
HDAC3O15379 AC008250.2-201ENST00000615261 205 ntBASIC2.51□□□□□ -2.01
HDAC3O15379 AC091953.2-201ENST00000623979 160 ntBASIC2.51□□□□□ -2.01
HDAC3O15379 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HDAC3O15379 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.51□□□□□ -2.01
HDAC3O15379 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.51□□□□□ -2.01
HDAC3O15379 GNG5P1-201ENST00000255500 204 ntBASIC2.5□□□□□ -2.01
HDAC3O15379 U8.3-201ENST00000363321 132 ntBASIC2.5□□□□□ -2.01
HDAC3O15379 RNU4-1-201ENST00000363925 141 ntBASIC2.5□□□□□ -2.01
HDAC3O15379 U8.8-201ENST00000365399 135 ntBASIC2.5□□□□□ -2.01
HDAC3O15379 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.5□□□□□ -2.01
HDAC3O15379 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.5□□□□□ -2.01
HDAC3O15379 RPLP0P7-201ENST00000416050 667 ntBASIC2.5□□□□□ -2.01
HDAC3O15379 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.5□□□□□ -2.01
HDAC3O15379 AL589872.1-201ENST00000426602 288 ntBASIC2.5□□□□□ -2.01
HDAC3O15379 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.5□□□□□ -2.01
HDAC3O15379 CR769767.1-201ENST00000436337 346 ntBASIC2.5□□□□□ -2.01
HDAC3O15379 RPL22P17-201ENST00000438729 315 ntBASIC2.5□□□□□ -2.01
HDAC3O15379 AL359385.1-201ENST00000456509 365 ntBASIC2.5□□□□□ -2.01
HDAC3O15379 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.5□□□□□ -2.01
HDAC3O15379 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.5□□□□□ -2.01
HDAC3O15379 MTND1P3-201ENST00000484956 952 ntBASIC2.5□□□□□ -2.01
HDAC3O15379 LARP1BP2-201ENST00000486594 519 ntBASIC2.5□□□□□ -2.01
HDAC3O15379 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
HDAC3O15379 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
HDAC3O15379 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.5□□□□□ -2.01
HDAC3O15379 NDUFB4P2-201ENST00000509515 391 ntBASIC2.5□□□□□ -2.01
HDAC3O15379 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.5□□□□□ -2.01
HDAC3O15379 SNORA31.11-201ENST00000516528 139 ntBASIC2.5□□□□□ -2.01
HDAC3O15379 RNU2-46P-201ENST00000517038 113 ntBASIC2.5□□□□□ -2.01
HDAC3O15379 CKS1BP7-201ENST00000522230 235 ntBASIC2.5□□□□□ -2.01
HDAC3O15379 AP000907.2-201ENST00000530827 353 ntBASIC2.5□□□□□ -2.01
HDAC3O15379 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.5□□□□□ -2.01
HDAC3O15379 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.5□□□□□ -2.01
HDAC3O15379 AC245505.1-201ENST00000556398 224 ntBASIC2.5□□□□□ -2.01
HDAC3O15379 MIR3118-1-201ENST00000581787 76 ntBASIC2.5□□□□□ -2.01
HDAC3O15379 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.5□□□□□ -2.01
HDAC3O15379 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.5□□□□□ -2.01
HDAC3O15379 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.5□□□□□ -2.01
HDAC3O15379 AL158211.4-201ENST00000606988 584 ntBASIC2.5□□□□□ -2.01
HDAC3O15379 AL359740.1-201ENST00000624340 592 ntBASIC2.5□□□□□ -2.01
HDAC3O15379 AL159972.1-201ENST00000625150 448 ntBASIC2.5□□□□□ -2.01
HDAC3O15379 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
HDAC3O15379 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
HDAC3O15379 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HDAC3O15379 RNY4P24-201ENST00000362735 96 ntBASIC2.49□□□□□ -2.01
HDAC3O15379 RNU6-1078P-201ENST00000364522 103 ntBASIC2.49□□□□□ -2.01
HDAC3O15379 RNY4P16-201ENST00000364768 94 ntBASIC2.49□□□□□ -2.01
HDAC3O15379 RNU1-140P-201ENST00000365040 165 ntBASIC2.49□□□□□ -2.01
HDAC3O15379 MIR493-201ENST00000385254 89 ntBASIC2.49□□□□□ -2.01
HDAC3O15379 RNU6-882P-201ENST00000391025 103 ntBASIC2.49□□□□□ -2.01
HDAC3O15379 AL592148.1-201ENST00000413568 445 ntBASIC2.49□□□□□ -2.01
HDAC3O15379 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HDAC3O15379 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.49□□□□□ -2.01
HDAC3O15379 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.49□□□□□ -2.01
HDAC3O15379 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.49□□□□□ -2.01
HDAC3O15379 RPL27AP8-201ENST00000424277 446 ntBASIC2.49□□□□□ -2.01
HDAC3O15379 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.49□□□□□ -2.01
HDAC3O15379 AC087499.2-201ENST00000432861 149 ntBASIC2.49□□□□□ -2.01
HDAC3O15379 MTND1P4-201ENST00000435196 415 ntBASIC2.49□□□□□ -2.01
HDAC3O15379 AC009961.2-201ENST00000435771 251 ntBASIC2.49□□□□□ -2.01
HDAC3O15379 RPS15AP7-201ENST00000439294 405 ntBASIC2.49□□□□□ -2.01
HDAC3O15379 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.49□□□□□ -2.01
HDAC3O15379 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.49□□□□□ -2.01
HDAC3O15379 GAPDHP17-201ENST00000449858 1001 ntBASIC2.49□□□□□ -2.01
HDAC3O15379 AL033528.1-201ENST00000453780 140 ntBASIC2.49□□□□□ -2.01
HDAC3O15379 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.49□□□□□ -2.01
HDAC3O15379 AL135752.1-201ENST00000479477 471 ntBASIC2.49□□□□□ -2.01
HDAC3O15379 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.49□□□□□ -2.01
HDAC3O15379 AC138853.1-201ENST00000503549 823 ntBASIC2.49□□□□□ -2.01
HDAC3O15379 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.49□□□□□ -2.01
HDAC3O15379 AC006445.2-201ENST00000510061 472 ntBASIC2.49□□□□□ -2.01
HDAC3O15379 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.49□□□□□ -2.01
HDAC3O15379 SNORA18.6-201ENST00000516792 115 ntBASIC2.49□□□□□ -2.01
HDAC3O15379 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
HDAC3O15379 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.49□□□□□ -2.01
HDAC3O15379 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.49□□□□□ -2.01
HDAC3O15379 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.49□□□□□ -2.01
HDAC3O15379 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.49□□□□□ -2.01
HDAC3O15379 AC016957.1-201ENST00000534895 309 ntBASIC2.49□□□□□ -2.01
HDAC3O15379 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.49□□□□□ -2.01
HDAC3O15379 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.49□□□□□ -2.01
HDAC3O15379 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.49□□□□□ -2.01
HDAC3O15379 AC011451.2-201ENST00000604303 598 ntBASIC2.49□□□□□ -2.01
HDAC3O15379 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HDAC3O15379 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HDAC3O15379 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.49□□□□□ -2.01
HDAC3O15379 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.49□□□□□ -2.01
HDAC3O15379 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HDAC3O15379 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
HDAC3O15379 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
HDAC3O15379 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HDAC3O15379 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.48□□□□□ -2.01
HDAC3O15379 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
HDAC3O15379 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
HDAC3O15379 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 172.8 ms