Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.06□□□□□ -2.08
CCNB1IP1Q9NPC3 NACAP2-201ENST00000318548 624 ntBASIC2.06□□□□□ -2.08
CCNB1IP1Q9NPC3 HSPE1P11-201ENST00000339579 310 ntBASIC2.06□□□□□ -2.08
CCNB1IP1Q9NPC3 RNU6-486P-201ENST00000363116 107 ntBASIC2.06□□□□□ -2.08
CCNB1IP1Q9NPC3 OR5H15-201ENST00000383696 930 ntBASIC2.06□□□□□ -2.08
CCNB1IP1Q9NPC3 RNU1-148P-201ENST00000384472 162 ntBASIC2.06□□□□□ -2.08
CCNB1IP1Q9NPC3 Y_RNA.510-201ENST00000384511 114 ntBASIC2.06□□□□□ -2.08
CCNB1IP1Q9NPC3 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
CCNB1IP1Q9NPC3 ZNF90P2-204ENST00000419323 1075 ntBASIC2.06□□□□□ -2.08
CCNB1IP1Q9NPC3 AC083875.1-201ENST00000419509 405 ntBASIC2.06□□□□□ -2.08
CCNB1IP1Q9NPC3 TXNL1P1-201ENST00000429528 554 ntBASIC2.06□□□□□ -2.08
CCNB1IP1Q9NPC3 EEF1A1P39-201ENST00000440791 250 ntBASIC2.06□□□□□ -2.08
CCNB1IP1Q9NPC3 GPM6BP3-201ENST00000442797 145 ntBASIC2.06□□□□□ -2.08
CCNB1IP1Q9NPC3 AC124916.1-201ENST00000444020 547 ntBASIC2.06□□□□□ -2.08
CCNB1IP1Q9NPC3 PSPHP1-201ENST00000450062 261 ntBASIC2.06□□□□□ -2.08
CCNB1IP1Q9NPC3 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.06□□□□□ -2.08
CCNB1IP1Q9NPC3 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.06□□□□□ -2.08
CCNB1IP1Q9NPC3 AC025033.1-201ENST00000463883 194 ntBASIC2.06□□□□□ -2.08
CCNB1IP1Q9NPC3 RPS27P21-201ENST00000486977 252 ntBASIC2.06□□□□□ -2.08
CCNB1IP1Q9NPC3 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.06□□□□□ -2.08
CCNB1IP1Q9NPC3 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC2.06□□□□□ -2.08
CCNB1IP1Q9NPC3 AC118465.1-201ENST00000513820 1271 ntBASIC2.06□□□□□ -2.08
CCNB1IP1Q9NPC3 AC025755.1-201ENST00000521306 278 ntBASIC2.06□□□□□ -2.08
CCNB1IP1Q9NPC3 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.06□□□□□ -2.08
CCNB1IP1Q9NPC3 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.06□□□□□ -2.08
CCNB1IP1Q9NPC3 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.06□□□□□ -2.08
CCNB1IP1Q9NPC3 AC027176.1-201ENST00000560204 514 ntBASIC2.06□□□□□ -2.08
CCNB1IP1Q9NPC3 MIR3167-201ENST00000579623 85 ntBASIC2.06□□□□□ -2.08
CCNB1IP1Q9NPC3 MIR5007-201ENST00000583098 95 ntBASIC2.06□□□□□ -2.08
CCNB1IP1Q9NPC3 MIR4293-201ENST00000584305 78 ntBASIC2.06□□□□□ -2.08
CCNB1IP1Q9NPC3 NRBF2P1-201ENST00000587407 859 ntBASIC2.06□□□□□ -2.08
CCNB1IP1Q9NPC3 MTND3P19-201ENST00000603825 345 ntBASIC2.06□□□□□ -2.08
CCNB1IP1Q9NPC3 BNIP3P31-201ENST00000604515 566 ntBASIC2.06□□□□□ -2.08
CCNB1IP1Q9NPC3 AC103810.6-201ENST00000606708 136 ntBASIC2.06□□□□□ -2.08
CCNB1IP1Q9NPC3 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC2.06□□□□□ -2.08
CCNB1IP1Q9NPC3 AC107294.1-201ENST00000609524 467 ntBASIC2.06□□□□□ -2.08
CCNB1IP1Q9NPC3 AL031601.2-202ENST00000622650 282 ntBASIC2.06□□□□□ -2.08
CCNB1IP1Q9NPC3 AL138960.2-201ENST00000625145 535 ntBASIC2.06□□□□□ -2.08
CCNB1IP1Q9NPC3 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.06□□□□□ -2.08
CCNB1IP1Q9NPC3 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.06□□□□□ -2.08
CCNB1IP1Q9NPC3 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CCNB1IP1Q9NPC3 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
CCNB1IP1Q9NPC3 UBE2L2-201ENST00000254302 429 ntBASIC2.05□□□□□ -2.08
CCNB1IP1Q9NPC3 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CCNB1IP1Q9NPC3 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CCNB1IP1Q9NPC3 Y_RNA.465-201ENST00000384293 102 ntBASIC2.05□□□□□ -2.08
CCNB1IP1Q9NPC3 RNU6-658P-201ENST00000384606 106 ntBASIC2.05□□□□□ -2.08
CCNB1IP1Q9NPC3 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
CCNB1IP1Q9NPC3 U3.40-201ENST00000408706 208 ntBASIC2.05□□□□□ -2.08
CCNB1IP1Q9NPC3 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.05□□□□□ -2.08
CCNB1IP1Q9NPC3 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.05□□□□□ -2.08
CCNB1IP1Q9NPC3 AC093106.2-201ENST00000428212 385 ntBASIC2.05□□□□□ -2.08
CCNB1IP1Q9NPC3 Z98742.2-201ENST00000431564 187 ntBASIC2.05□□□□□ -2.08
CCNB1IP1Q9NPC3 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.05□□□□□ -2.08
CCNB1IP1Q9NPC3 RPS15AP28-201ENST00000435088 386 ntBASIC2.05□□□□□ -2.08
CCNB1IP1Q9NPC3 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.05□□□□□ -2.08
CCNB1IP1Q9NPC3 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.05□□□□□ -2.08
CCNB1IP1Q9NPC3 SDR42E1P3-201ENST00000438345 502 ntBASIC2.05□□□□□ -2.08
CCNB1IP1Q9NPC3 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.05□□□□□ -2.08
CCNB1IP1Q9NPC3 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.05□□□□□ -2.08
CCNB1IP1Q9NPC3 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.05□□□□□ -2.08
CCNB1IP1Q9NPC3 AC087276.1-201ENST00000529659 480 ntBASIC2.05□□□□□ -2.08
CCNB1IP1Q9NPC3 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.05□□□□□ -2.08
CCNB1IP1Q9NPC3 AL121821.2-201ENST00000556081 394 ntBASIC2.05□□□□□ -2.08
CCNB1IP1Q9NPC3 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.05□□□□□ -2.08
CCNB1IP1Q9NPC3 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.05□□□□□ -2.08
CCNB1IP1Q9NPC3 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.05□□□□□ -2.08
CCNB1IP1Q9NPC3 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.05□□□□□ -2.08
CCNB1IP1Q9NPC3 AC091057.3-201ENST00000602684 733 ntBASIC2.05□□□□□ -2.08
CCNB1IP1Q9NPC3 AC025165.5-201ENST00000602802 578 ntBASIC2.05□□□□□ -2.08
CCNB1IP1Q9NPC3 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CCNB1IP1Q9NPC3 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.05□□□□□ -2.08
CCNB1IP1Q9NPC3 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CCNB1IP1Q9NPC3 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.05□□□□□ -2.08
CCNB1IP1Q9NPC3 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CCNB1IP1Q9NPC3 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
CCNB1IP1Q9NPC3 RNU6-512P-201ENST00000364438 103 ntBASIC2.04□□□□□ -2.08
CCNB1IP1Q9NPC3 U3.12-201ENST00000364498 214 ntBASIC2.04□□□□□ -2.08
CCNB1IP1Q9NPC3 SNORA16B-201ENST00000364674 135 ntBASIC2.04□□□□□ -2.08
CCNB1IP1Q9NPC3 RNA5SP138-201ENST00000365098 114 ntBASIC2.04□□□□□ -2.08
CCNB1IP1Q9NPC3 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.04□□□□□ -2.08
CCNB1IP1Q9NPC3 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CCNB1IP1Q9NPC3 RNU6-19P-201ENST00000384718 107 ntBASIC2.04□□□□□ -2.08
CCNB1IP1Q9NPC3 RPL17P50-201ENST00000396131 546 ntBASIC2.04□□□□□ -2.08
CCNB1IP1Q9NPC3 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CCNB1IP1Q9NPC3 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.04□□□□□ -2.08
CCNB1IP1Q9NPC3 PTGES3P4-201ENST00000426243 356 ntBASIC2.04□□□□□ -2.08
CCNB1IP1Q9NPC3 AL445669.1-201ENST00000426743 755 ntBASIC2.04□□□□□ -2.08
CCNB1IP1Q9NPC3 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC2.04□□□□□ -2.08
CCNB1IP1Q9NPC3 AC004383.1-201ENST00000438135 289 ntBASIC2.04□□□□□ -2.08
CCNB1IP1Q9NPC3 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.04□□□□□ -2.08
CCNB1IP1Q9NPC3 FAM103A2P-201ENST00000444122 354 ntBASIC2.04□□□□□ -2.08
CCNB1IP1Q9NPC3 AP001324.2-201ENST00000461163 319 ntBASIC2.04□□□□□ -2.08
CCNB1IP1Q9NPC3 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.04□□□□□ -2.08
CCNB1IP1Q9NPC3 RPF2P2-201ENST00000504693 896 ntBASIC2.04□□□□□ -2.08
CCNB1IP1Q9NPC3 AF213884.2-201ENST00000510417 903 ntBASIC2.04□□□□□ -2.08
CCNB1IP1Q9NPC3 RNA5SP112-201ENST00000515937 99 ntBASIC2.04□□□□□ -2.08
CCNB1IP1Q9NPC3 RNU6-64P-201ENST00000517119 105 ntBASIC2.04□□□□□ -2.08
CCNB1IP1Q9NPC3 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CCNB1IP1Q9NPC3 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 225.7 ms