Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AC008121.1-201ENST00000603244 268 ntBASIC4.84□□□□□ -1.63
NFKB1P19838 MIR6798-201ENST00000612887 67 ntBASIC4.84□□□□□ -1.63
NFKB1P19838 MIR7155-201ENST00000615925 56 ntBASIC4.84□□□□□ -1.63
NFKB1P19838 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.63
NFKB1P19838 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
NFKB1P19838 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.84□□□□□ -1.63
NFKB1P19838 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC4.84□□□□□ -1.64
NFKB1P19838 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
NFKB1P19838 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
NFKB1P19838 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
NFKB1P19838 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.84□□□□□ -1.64
NFKB1P19838 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NFKB1P19838 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
NFKB1P19838 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NFKB1P19838 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.83□□□□□ -1.64
NFKB1P19838 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
NFKB1P19838 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.83□□□□□ -1.64
NFKB1P19838 MIR105-2-201ENST00000385083 81 ntBASIC4.83□□□□□ -1.64
NFKB1P19838 SNORD78.2-201ENST00000391076 69 ntBASIC4.83□□□□□ -1.64
NFKB1P19838 RNU2-20P-201ENST00000410425 191 ntBASIC4.83□□□□□ -1.64
NFKB1P19838 RN7SKP125-201ENST00000410481 302 ntBASIC4.83□□□□□ -1.64
NFKB1P19838 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.83□□□□□ -1.64
NFKB1P19838 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.83□□□□□ -1.64
NFKB1P19838 EIF1P2-201ENST00000428233 350 ntBASIC4.83□□□□□ -1.64
NFKB1P19838 AL358472.1-201ENST00000431295 329 ntBASIC4.83□□□□□ -1.64
NFKB1P19838 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.83□□□□□ -1.64
NFKB1P19838 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NFKB1P19838 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.83□□□□□ -1.64
NFKB1P19838 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.83□□□□□ -1.64
NFKB1P19838 RNU7-175P-201ENST00000515915 61 ntBASIC4.83□□□□□ -1.64
NFKB1P19838 RNU6-861P-201ENST00000516745 106 ntBASIC4.83□□□□□ -1.64
NFKB1P19838 AP006245.1-201ENST00000522549 120 ntBASIC4.83□□□□□ -1.64
NFKB1P19838 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.83□□□□□ -1.64
NFKB1P19838 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.83□□□□□ -1.64
NFKB1P19838 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC4.83□□□□□ -1.64
NFKB1P19838 AC233702.9-201ENST00000581528 203 ntBASIC4.83□□□□□ -1.64
NFKB1P19838 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.83□□□□□ -1.64
NFKB1P19838 MZT1P2-201ENST00000604387 248 ntBASIC4.83□□□□□ -1.64
NFKB1P19838 AC005046.1-201ENST00000608515 625 ntBASIC4.83□□□□□ -1.64
NFKB1P19838 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NFKB1P19838 AC097372.5-201ENST00000623665 376 ntBASIC4.83□□□□□ -1.64
NFKB1P19838 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.83□□□□□ -1.64
NFKB1P19838 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.83□□□□□ -1.64
NFKB1P19838 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
NFKB1P19838 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NFKB1P19838 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NFKB1P19838 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.82□□□□□ -1.64
NFKB1P19838 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.82□□□□□ -1.64
NFKB1P19838 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
NFKB1P19838 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.82□□□□□ -1.64
NFKB1P19838 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NFKB1P19838 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
NFKB1P19838 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NFKB1P19838 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NFKB1P19838 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
NFKB1P19838 AL136164.3-201ENST00000624429 3978 ntBASIC4.82□□□□□ -1.64
NFKB1P19838 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NFKB1P19838 AC116096.1-201ENST00000566804 2314 ntBASIC4.82□□□□□ -1.64
NFKB1P19838 RNU6-227P-201ENST00000362865 103 ntBASIC4.82□□□□□ -1.64
NFKB1P19838 RNU1-83P-201ENST00000363426 164 ntBASIC4.82□□□□□ -1.64
NFKB1P19838 RNU6-937P-201ENST00000384325 106 ntBASIC4.82□□□□□ -1.64
NFKB1P19838 AL590762.2-201ENST00000395798 571 ntBASIC4.82□□□□□ -1.64
NFKB1P19838 Y_RNA.623-201ENST00000411128 95 ntBASIC4.82□□□□□ -1.64
NFKB1P19838 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.82□□□□□ -1.64
NFKB1P19838 AL138785.1-201ENST00000425821 331 ntBASIC4.82□□□□□ -1.64
NFKB1P19838 AC007389.2-201ENST00000434630 306 ntBASIC4.82□□□□□ -1.64
NFKB1P19838 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC4.82□□□□□ -1.64
NFKB1P19838 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.82□□□□□ -1.64
NFKB1P19838 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NFKB1P19838 AC079168.2-201ENST00000453977 416 ntBASIC4.82□□□□□ -1.64
NFKB1P19838 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.82□□□□□ -1.64
NFKB1P19838 COX6CP14-201ENST00000469580 174 ntBASIC4.82□□□□□ -1.64
NFKB1P19838 RPL21P13-201ENST00000488305 481 ntBASIC4.82□□□□□ -1.64
NFKB1P19838 AC074198.2-201ENST00000508153 258 ntBASIC4.82□□□□□ -1.64
NFKB1P19838 RNU6-1278P-201ENST00000516130 107 ntBASIC4.82□□□□□ -1.64
NFKB1P19838 RNU1-6P-201ENST00000516290 144 ntBASIC4.82□□□□□ -1.64
NFKB1P19838 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.82□□□□□ -1.64
NFKB1P19838 AP001880.2-201ENST00000538233 448 ntBASIC4.82□□□□□ -1.64
NFKB1P19838 AL121603.1-201ENST00000553815 142 ntBASIC4.82□□□□□ -1.64
NFKB1P19838 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.82□□□□□ -1.64
NFKB1P19838 AL390726.5-202ENST00000564800 256 ntBASIC4.82□□□□□ -1.64
NFKB1P19838 MIR4646-201ENST00000580775 63 ntBASIC4.82□□□□□ -1.64
NFKB1P19838 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
NFKB1P19838 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NFKB1P19838 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
NFKB1P19838 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NFKB1P19838 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NFKB1P19838 AC083843.3-201ENST00000623679 2186 ntBASIC4.82□□□□□ -1.64
NFKB1P19838 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NFKB1P19838 AL359854.1-201ENST00000614203 1594 ntBASIC4.82□□□□□ -1.64
NFKB1P19838 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.82□□□□□ -1.64
NFKB1P19838 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
NFKB1P19838 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.81□□□□□ -1.64
NFKB1P19838 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
NFKB1P19838 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NFKB1P19838 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NFKB1P19838 Y_RNA.122-201ENST00000363331 96 ntBASIC4.81□□□□□ -1.64
NFKB1P19838 Y_RNA.170-201ENST00000363746 110 ntBASIC4.81□□□□□ -1.64
NFKB1P19838 UBBP2-201ENST00000376781 231 ntBASIC4.81□□□□□ -1.64
NFKB1P19838 RNY1P5-201ENST00000383890 115 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 186.8 ms