Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.91□□□□□ -1.62
NFKB1P19838 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.91□□□□□ -1.62
NFKB1P19838 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.91□□□□□ -1.62
NFKB1P19838 CEACAMP7-201ENST00000444105 496 ntBASIC4.91□□□□□ -1.62
NFKB1P19838 HIGD1AP2-201ENST00000446367 280 ntBASIC4.91□□□□□ -1.62
NFKB1P19838 RPL7P49-201ENST00000471402 708 ntBASIC4.91□□□□□ -1.62
NFKB1P19838 SERF1AP1-201ENST00000514575 187 ntBASIC4.91□□□□□ -1.62
NFKB1P19838 Y_RNA.683-201ENST00000516508 93 ntBASIC4.91□□□□□ -1.62
NFKB1P19838 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.91□□□□□ -1.62
NFKB1P19838 AC093249.4-201ENST00000564755 259 ntBASIC4.91□□□□□ -1.62
NFKB1P19838 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.91□□□□□ -1.62
NFKB1P19838 CENPF-206ENST00000614578 528 ntTSL 5 BASIC4.91□□□□□ -1.62
NFKB1P19838 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.91□□□□□ -1.62
NFKB1P19838 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.91□□□□□ -1.62
NFKB1P19838 INTS6P1-201ENST00000504674 2530 ntBASIC4.91□□□□□ -1.62
NFKB1P19838 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NFKB1P19838 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
NFKB1P19838 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
NFKB1P19838 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NFKB1P19838 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.62
NFKB1P19838 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.9□□□□□ -1.62
NFKB1P19838 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
NFKB1P19838 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
NFKB1P19838 Y_RNA.143-201ENST00000363520 106 ntBASIC4.9□□□□□ -1.63
NFKB1P19838 Y_RNA.358-201ENST00000365491 99 ntBASIC4.9□□□□□ -1.63
NFKB1P19838 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NFKB1P19838 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NFKB1P19838 AC119751.6-201ENST00000416712 186 ntBASIC4.9□□□□□ -1.63
NFKB1P19838 RPL36AP10-201ENST00000421785 322 ntBASIC4.9□□□□□ -1.63
NFKB1P19838 OR2AM1P-201ENST00000422137 422 ntBASIC4.9□□□□□ -1.63
NFKB1P19838 RPL12P46-201ENST00000436610 195 ntBASIC4.9□□□□□ -1.63
NFKB1P19838 PSMD10P3-201ENST00000437000 448 ntBASIC4.9□□□□□ -1.63
NFKB1P19838 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
NFKB1P19838 NDUFB4P10-201ENST00000452541 359 ntBASIC4.9□□□□□ -1.63
NFKB1P19838 RN7SL515P-201ENST00000463999 297 ntBASIC4.9□□□□□ -1.63
NFKB1P19838 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.9□□□□□ -1.63
NFKB1P19838 AC020890.1-201ENST00000491837 504 ntBASIC4.9□□□□□ -1.63
NFKB1P19838 AC107393.1-201ENST00000512403 346 ntBASIC4.9□□□□□ -1.63
NFKB1P19838 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.9□□□□□ -1.63
NFKB1P19838 SCARNA24.2-201ENST00000516968 130 ntBASIC4.9□□□□□ -1.63
NFKB1P19838 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC4.9□□□□□ -1.63
NFKB1P19838 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.9□□□□□ -1.63
NFKB1P19838 AC104581.2-201ENST00000572227 430 ntBASIC4.9□□□□□ -1.63
NFKB1P19838 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.9□□□□□ -1.63
NFKB1P19838 AL121932.1-201ENST00000605542 214 ntBASIC4.9□□□□□ -1.63
NFKB1P19838 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.9□□□□□ -1.63
NFKB1P19838 Y_RNA.772-201ENST00000606692 102 ntBASIC4.9□□□□□ -1.63
NFKB1P19838 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
NFKB1P19838 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NFKB1P19838 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
NFKB1P19838 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NFKB1P19838 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NFKB1P19838 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.9□□□□□ -1.63
NFKB1P19838 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NFKB1P19838 SMG1P6-201ENST00000532337 2930 ntBASIC4.9□□□□□ -1.63
NFKB1P19838 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NFKB1P19838 TLK1P1-201ENST00000456760 2440 ntBASIC4.89□□□□□ -1.63
NFKB1P19838 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NFKB1P19838 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NFKB1P19838 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.89□□□□□ -1.63
NFKB1P19838 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NFKB1P19838 SALL4P2-201ENST00000423288 2910 ntBASIC4.89□□□□□ -1.63
NFKB1P19838 AC009812.4-201ENST00000569134 1805 ntBASIC4.89□□□□□ -1.63
NFKB1P19838 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NFKB1P19838 MIR412-201ENST00000362142 91 ntBASIC4.89□□□□□ -1.63
NFKB1P19838 U3.6-201ENST00000363622 211 ntBASIC4.89□□□□□ -1.63
NFKB1P19838 SNORA12.2-201ENST00000391040 156 ntBASIC4.89□□□□□ -1.63
NFKB1P19838 U3.30-201ENST00000391308 210 ntBASIC4.89□□□□□ -1.63
NFKB1P19838 RNU6-493P-201ENST00000391321 108 ntBASIC4.89□□□□□ -1.63
NFKB1P19838 GLULP6-201ENST00000399502 913 ntBASIC4.89□□□□□ -1.63
NFKB1P19838 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.89□□□□□ -1.63
NFKB1P19838 AL592148.1-201ENST00000413568 445 ntBASIC4.89□□□□□ -1.63
NFKB1P19838 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC4.89□□□□□ -1.63
NFKB1P19838 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.89□□□□□ -1.63
NFKB1P19838 OR4C10P-201ENST00000434991 931 ntBASIC4.89□□□□□ -1.63
NFKB1P19838 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.89□□□□□ -1.63
NFKB1P19838 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC4.89□□□□□ -1.63
NFKB1P19838 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.89□□□□□ -1.63
NFKB1P19838 MIR2355-201ENST00000517199 87 ntBASIC4.89□□□□□ -1.63
NFKB1P19838 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.89□□□□□ -1.63
NFKB1P19838 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NFKB1P19838 AC084851.1-201ENST00000529105 249 ntBASIC4.89□□□□□ -1.63
NFKB1P19838 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.89□□□□□ -1.63
NFKB1P19838 AC008033.2-201ENST00000542626 177 ntBASIC4.89□□□□□ -1.63
NFKB1P19838 AC004024.1-201ENST00000549244 247 ntBASIC4.89□□□□□ -1.63
NFKB1P19838 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.89□□□□□ -1.63
NFKB1P19838 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC4.89□□□□□ -1.63
NFKB1P19838 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.89□□□□□ -1.63
NFKB1P19838 CR381572.2-201ENST00000624852 397 ntBASIC4.89□□□□□ -1.63
NFKB1P19838 SAMMSON-226ENST00000642089 1582 ntBASIC4.89□□□□□ -1.63
NFKB1P19838 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NFKB1P19838 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.89□□□□□ -1.63
NFKB1P19838 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.89□□□□□ -1.63
NFKB1P19838 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NFKB1P19838 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.89□□□□□ -1.63
NFKB1P19838 AC107027.3-201ENST00000565095 3473 ntBASIC4.89□□□□□ -1.63
NFKB1P19838 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
NFKB1P19838 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
NFKB1P19838 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.89□□□□□ -1.63
NFKB1P19838 MAPK10-320ENST00000641462 6696 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 181.3 ms