Protein–RNA interactions for Protein: O43474

KLF4, Krueppel-like factor 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4O43474 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
KLF4O43474 AC027290.2-201ENST00000623210 18662 ntBASIC4.23□□□□□ -1.73
KLF4O43474 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
KLF4O43474 Y_RNA.2-201ENST00000362330 96 ntBASIC4.23□□□□□ -1.73
KLF4O43474 RNU6-72P-201ENST00000384285 79 ntBASIC4.23□□□□□ -1.73
KLF4O43474 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
KLF4O43474 RN7SKP167-201ENST00000411047 285 ntBASIC4.23□□□□□ -1.73
KLF4O43474 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
KLF4O43474 BX510359.2-201ENST00000417920 305 ntBASIC4.23□□□□□ -1.73
KLF4O43474 USMG5P1-201ENST00000425964 177 ntBASIC4.23□□□□□ -1.73
KLF4O43474 RPL23AP82-202ENST00000427528 469 ntBASIC4.23□□□□□ -1.73
KLF4O43474 USP9YP30-201ENST00000430729 455 ntBASIC4.23□□□□□ -1.73
KLF4O43474 RPL23AP50-201ENST00000434149 455 ntBASIC4.23□□□□□ -1.73
KLF4O43474 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.23□□□□□ -1.73
KLF4O43474 snoU109.2-201ENST00000459316 135 ntBASIC4.23□□□□□ -1.73
KLF4O43474 RN7SL481P-201ENST00000477764 299 ntBASIC4.23□□□□□ -1.73
KLF4O43474 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.23□□□□□ -1.73
KLF4O43474 UBE2CP3-201ENST00000502715 450 ntBASIC4.23□□□□□ -1.73
KLF4O43474 AK3P2-201ENST00000507976 429 ntBASIC4.23□□□□□ -1.73
KLF4O43474 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.23□□□□□ -1.73
KLF4O43474 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.23□□□□□ -1.73
KLF4O43474 Y_RNA.687-201ENST00000516558 91 ntBASIC4.23□□□□□ -1.73
KLF4O43474 RAB9BP1-201ENST00000519581 626 ntBASIC4.23□□□□□ -1.73
KLF4O43474 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.23□□□□□ -1.73
KLF4O43474 AP004607.1-201ENST00000524456 203 ntBASIC4.23□□□□□ -1.73
KLF4O43474 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.23□□□□□ -1.73
KLF4O43474 AL139395.1-201ENST00000603662 160 ntBASIC4.23□□□□□ -1.73
KLF4O43474 AC012468.1-201ENST00000604888 430 ntBASIC4.23□□□□□ -1.73
KLF4O43474 AL121917.1-203ENST00000605534 577 ntBASIC4.23□□□□□ -1.73
KLF4O43474 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.23□□□□□ -1.73
KLF4O43474 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
KLF4O43474 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
KLF4O43474 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
KLF4O43474 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
KLF4O43474 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
KLF4O43474 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
KLF4O43474 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
KLF4O43474 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
KLF4O43474 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
KLF4O43474 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
KLF4O43474 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
KLF4O43474 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
KLF4O43474 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.22□□□□□ -1.73
KLF4O43474 RPL9P7-201ENST00000330965 580 ntBASIC4.22□□□□□ -1.73
KLF4O43474 RNA5SP295-201ENST00000362655 121 ntBASIC4.22□□□□□ -1.73
KLF4O43474 Y_RNA.202-201ENST00000364083 110 ntBASIC4.22□□□□□ -1.73
KLF4O43474 RNU6-827P-201ENST00000365553 106 ntBASIC4.22□□□□□ -1.73
KLF4O43474 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
KLF4O43474 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
KLF4O43474 Y_RNA.646-201ENST00000410980 101 ntBASIC4.22□□□□□ -1.73
KLF4O43474 RNA5SP31-201ENST00000411144 127 ntBASIC4.22□□□□□ -1.73
KLF4O43474 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC4.22□□□□□ -1.73
KLF4O43474 AC099548.1-201ENST00000421443 426 ntBASIC4.22□□□□□ -1.73
KLF4O43474 AL513043.1-201ENST00000439124 535 ntBASIC4.22□□□□□ -1.73
KLF4O43474 MTCO3P10-201ENST00000455912 772 ntBASIC4.22□□□□□ -1.73
KLF4O43474 RPL9P9-202ENST00000466501 579 ntBASIC4.22□□□□□ -1.73
KLF4O43474 AC090096.1-201ENST00000489168 390 ntBASIC4.22□□□□□ -1.73
KLF4O43474 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.22□□□□□ -1.73
KLF4O43474 Y_RNA.670-201ENST00000516255 105 ntBASIC4.22□□□□□ -1.73
KLF4O43474 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.22□□□□□ -1.73
KLF4O43474 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
KLF4O43474 AC009643.1-201ENST00000532030 391 ntBASIC4.22□□□□□ -1.73
KLF4O43474 TRAV32-201ENST00000553993 340 ntBASIC4.22□□□□□ -1.73
KLF4O43474 CYCSP39-201ENST00000565821 309 ntBASIC4.22□□□□□ -1.73
KLF4O43474 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.22□□□□□ -1.73
KLF4O43474 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.22□□□□□ -1.73
KLF4O43474 MIR378J-201ENST00000611988 109 ntBASIC4.22□□□□□ -1.73
KLF4O43474 DLEU2_5.1-201ENST00000615567 84 ntBASIC4.22□□□□□ -1.73
KLF4O43474 MIR6853-201ENST00000619642 74 ntBASIC4.22□□□□□ -1.73
KLF4O43474 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.22□□□□□ -1.73
KLF4O43474 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.22□□□□□ -1.73
KLF4O43474 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.22□□□□□ -1.73
KLF4O43474 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
KLF4O43474 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.22□□□□□ -1.73
KLF4O43474 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.22□□□□□ -1.73
KLF4O43474 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
KLF4O43474 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
KLF4O43474 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
KLF4O43474 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.22□□□□□ -1.73
KLF4O43474 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
KLF4O43474 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
KLF4O43474 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
KLF4O43474 AC018529.3-201ENST00000624212 2254 ntBASIC4.21□□□□□ -1.73
KLF4O43474 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.21□□□□□ -1.73
KLF4O43474 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.21□□□□□ -1.73
KLF4O43474 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
KLF4O43474 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
KLF4O43474 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
KLF4O43474 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
KLF4O43474 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
KLF4O43474 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
KLF4O43474 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.21□□□□□ -1.74
KLF4O43474 Y_RNA.326-201ENST00000365176 113 ntBASIC4.21□□□□□ -1.74
KLF4O43474 Y_RNA.422-201ENST00000384054 114 ntBASIC4.21□□□□□ -1.74
KLF4O43474 RNA5SP146-201ENST00000410743 123 ntBASIC4.21□□□□□ -1.74
KLF4O43474 RNU6-325P-201ENST00000411132 105 ntBASIC4.21□□□□□ -1.74
KLF4O43474 SYF2P2-201ENST00000417620 583 ntBASIC4.21□□□□□ -1.74
KLF4O43474 RPL31P12-201ENST00000422587 358 ntBASIC4.21□□□□□ -1.74
KLF4O43474 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.21□□□□□ -1.74
KLF4O43474 DNAJC19P7-201ENST00000428811 344 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 225.5 ms