Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.03□□□□□ -1.76
PNKPQ96T60 AP004289.2-201ENST00000444413 1457 ntBASIC4.03□□□□□ -1.76
PNKPQ96T60 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PNKPQ96T60 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PNKPQ96T60 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PNKPQ96T60 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.02□□□□□ -1.77
PNKPQ96T60 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PNKPQ96T60 AL139276.1-201ENST00000311910 1001 ntBASIC4.02□□□□□ -1.77
PNKPQ96T60 Y_RNA.184-201ENST00000363884 108 ntBASIC4.02□□□□□ -1.77
PNKPQ96T60 RNU6-61P-201ENST00000365528 109 ntBASIC4.02□□□□□ -1.77
PNKPQ96T60 Y_RNA.373-201ENST00000365600 103 ntBASIC4.02□□□□□ -1.77
PNKPQ96T60 AL356057.2-201ENST00000403318 432 ntBASIC4.02□□□□□ -1.77
PNKPQ96T60 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.02□□□□□ -1.77
PNKPQ96T60 RNU2-29P-201ENST00000410423 189 ntBASIC4.02□□□□□ -1.77
PNKPQ96T60 RNA5SP44-201ENST00000410446 133 ntBASIC4.02□□□□□ -1.77
PNKPQ96T60 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.02□□□□□ -1.77
PNKPQ96T60 SSXP9-201ENST00000417503 292 ntBASIC4.02□□□□□ -1.77
PNKPQ96T60 AC068533.1-201ENST00000418542 415 ntBASIC4.02□□□□□ -1.77
PNKPQ96T60 RPL7L1P10-201ENST00000427790 463 ntBASIC4.02□□□□□ -1.77
PNKPQ96T60 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.02□□□□□ -1.77
PNKPQ96T60 GAPDHP27-201ENST00000447427 1020 ntBASIC4.02□□□□□ -1.77
PNKPQ96T60 AL118496.2-201ENST00000448300 230 ntBASIC4.02□□□□□ -1.77
PNKPQ96T60 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.02□□□□□ -1.77
PNKPQ96T60 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.02□□□□□ -1.77
PNKPQ96T60 snoU13.22-201ENST00000459428 104 ntBASIC4.02□□□□□ -1.77
PNKPQ96T60 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.02□□□□□ -1.77
PNKPQ96T60 AC007547.1-201ENST00000462177 490 ntBASIC4.02□□□□□ -1.77
PNKPQ96T60 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.02□□□□□ -1.77
PNKPQ96T60 RNU6-1095P-201ENST00000516148 108 ntBASIC4.02□□□□□ -1.77
PNKPQ96T60 Y_RNA.665-201ENST00000516177 98 ntBASIC4.02□□□□□ -1.77
PNKPQ96T60 RNU6-277P-201ENST00000516272 106 ntBASIC4.02□□□□□ -1.77
PNKPQ96T60 RNU6-1038P-201ENST00000516516 104 ntBASIC4.02□□□□□ -1.77
PNKPQ96T60 NDUFB9P3-201ENST00000521269 501 ntBASIC4.02□□□□□ -1.77
PNKPQ96T60 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.02□□□□□ -1.77
PNKPQ96T60 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.02□□□□□ -1.77
PNKPQ96T60 NCAPGP2-201ENST00000557911 754 ntBASIC4.02□□□□□ -1.77
PNKPQ96T60 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PNKPQ96T60 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.02□□□□□ -1.77
PNKPQ96T60 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.02□□□□□ -1.77
PNKPQ96T60 uc_338.5-201ENST00000611839 155 ntBASIC4.02□□□□□ -1.77
PNKPQ96T60 AC090574.1-201ENST00000623186 233 ntBASIC4.02□□□□□ -1.77
PNKPQ96T60 AC243312.2-201ENST00000623340 601 ntBASIC4.02□□□□□ -1.77
PNKPQ96T60 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.02□□□□□ -1.77
PNKPQ96T60 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.02□□□□□ -1.77
PNKPQ96T60 MIR1302-1-201ENST00000637932 143 ntBASIC4.02□□□□□ -1.77
PNKPQ96T60 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PNKPQ96T60 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
PNKPQ96T60 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.02□□□□□ -1.77
PNKPQ96T60 MAPK10-373ENST00000641983 6772 ntBASIC4.02□□□□□ -1.77
PNKPQ96T60 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
PNKPQ96T60 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
PNKPQ96T60 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PNKPQ96T60 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
PNKPQ96T60 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PNKPQ96T60 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PNKPQ96T60 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
PNKPQ96T60 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PNKPQ96T60 RNU6-960P-201ENST00000364056 120 ntBASIC4.01□□□□□ -1.77
PNKPQ96T60 SNORA73.2-201ENST00000364946 201 ntBASIC4.01□□□□□ -1.77
PNKPQ96T60 SNORD115-7-201ENST00000365306 82 ntBASIC4.01□□□□□ -1.77
PNKPQ96T60 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.01□□□□□ -1.77
PNKPQ96T60 Y_RNA.460-201ENST00000384255 102 ntBASIC4.01□□□□□ -1.77
PNKPQ96T60 TXNP7-201ENST00000406296 293 ntBASIC4.01□□□□□ -1.77
PNKPQ96T60 RNU4-26P-201ENST00000410270 107 ntBASIC4.01□□□□□ -1.77
PNKPQ96T60 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.01□□□□□ -1.77
PNKPQ96T60 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.01□□□□□ -1.77
PNKPQ96T60 AL162389.1-201ENST00000449233 177 ntBASIC4.01□□□□□ -1.77
PNKPQ96T60 AC233279.1-201ENST00000455300 423 ntBASIC4.01□□□□□ -1.77
PNKPQ96T60 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.01□□□□□ -1.77
PNKPQ96T60 RNU7-180P-201ENST00000459240 63 ntBASIC4.01□□□□□ -1.77
PNKPQ96T60 RNU6-329P-201ENST00000459618 107 ntBASIC4.01□□□□□ -1.77
PNKPQ96T60 AC008481.1-201ENST00000463278 396 ntBASIC4.01□□□□□ -1.77
PNKPQ96T60 HMGN1P13-201ENST00000505795 138 ntBASIC4.01□□□□□ -1.77
PNKPQ96T60 AC026801.2-201ENST00000515352 425 ntBASIC4.01□□□□□ -1.77
PNKPQ96T60 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.01□□□□□ -1.77
PNKPQ96T60 RPL7P20-201ENST00000520308 745 ntBASIC4.01□□□□□ -1.77
PNKPQ96T60 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.01□□□□□ -1.77
PNKPQ96T60 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.01□□□□□ -1.77
PNKPQ96T60 AL118558.2-201ENST00000556294 238 ntBASIC4.01□□□□□ -1.77
PNKPQ96T60 AC026464.5-201ENST00000562497 722 ntBASIC4.01□□□□□ -1.77
PNKPQ96T60 AC005668.1-201ENST00000571142 476 ntBASIC4.01□□□□□ -1.77
PNKPQ96T60 MIR5583-1-201ENST00000580941 59 ntBASIC4.01□□□□□ -1.77
PNKPQ96T60 MIR3944-201ENST00000581277 108 ntBASIC4.01□□□□□ -1.77
PNKPQ96T60 MIR4424-201ENST00000585257 86 ntBASIC4.01□□□□□ -1.77
PNKPQ96T60 FRG1KP-201ENST00000623592 341 ntBASIC4.01□□□□□ -1.77
PNKPQ96T60 MIR6715B-201ENST00000637172 77 ntBASIC4.01□□□□□ -1.77
PNKPQ96T60 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.01□□□□□ -1.77
PNKPQ96T60 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.01□□□□□ -1.77
PNKPQ96T60 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PNKPQ96T60 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
PNKPQ96T60 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.01□□□□□ -1.77
PNKPQ96T60 GABPAP-201ENST00000419271 1356 ntBASIC4.01□□□□□ -1.77
PNKPQ96T60 ZNF285B-201ENST00000561698 1767 ntBASIC4□□□□□ -1.77
PNKPQ96T60 DDX10P1-201ENST00000448545 1933 ntBASIC4□□□□□ -1.77
PNKPQ96T60 FRG1CP-201ENST00000358464 769 ntBASIC4□□□□□ -1.77
PNKPQ96T60 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4□□□□□ -1.77
PNKPQ96T60 Y_RNA.67-201ENST00000362870 100 ntBASIC4□□□□□ -1.77
PNKPQ96T60 RNU6-1155P-201ENST00000363554 107 ntBASIC4□□□□□ -1.77
PNKPQ96T60 RNU6-1284P-201ENST00000363701 100 ntBASIC4□□□□□ -1.77
PNKPQ96T60 RNU6-522P-201ENST00000364497 107 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 166.8 ms