Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AC012314.7-201ENST00000619693 93 ntBASIC5.31□□□□□ -1.56
TMEM88BA6NKF7 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
TMEM88BA6NKF7 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
TMEM88BA6NKF7 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TMEM88BA6NKF7 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TMEM88BA6NKF7 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TMEM88BA6NKF7 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
TMEM88BA6NKF7 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TMEM88BA6NKF7 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TMEM88BA6NKF7 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TMEM88BA6NKF7 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.3□□□□□ -1.56
TMEM88BA6NKF7 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TMEM88BA6NKF7 MUC2-202ENST00000613187 4845 ntBASIC5.3□□□□□ -1.56
TMEM88BA6NKF7 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.3□□□□□ -1.56
TMEM88BA6NKF7 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.3□□□□□ -1.56
TMEM88BA6NKF7 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
TMEM88BA6NKF7 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TMEM88BA6NKF7 AC100778.3-201ENST00000580060 1750 ntBASIC5.3□□□□□ -1.56
TMEM88BA6NKF7 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
TMEM88BA6NKF7 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
TMEM88BA6NKF7 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
TMEM88BA6NKF7 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TMEM88BA6NKF7 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TMEM88BA6NKF7 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TMEM88BA6NKF7 RNU1-115P-201ENST00000365329 160 ntBASIC5.3□□□□□ -1.56
TMEM88BA6NKF7 RNU6-196P-201ENST00000384315 107 ntBASIC5.3□□□□□ -1.56
TMEM88BA6NKF7 Y_RNA.473-201ENST00000384333 102 ntBASIC5.3□□□□□ -1.56
TMEM88BA6NKF7 MIR34A-201ENST00000385130 110 ntBASIC5.3□□□□□ -1.56
TMEM88BA6NKF7 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
TMEM88BA6NKF7 AL356057.3-201ENST00000402607 340 ntBASIC5.3□□□□□ -1.56
TMEM88BA6NKF7 RNU4-6P-201ENST00000410804 122 ntBASIC5.3□□□□□ -1.56
TMEM88BA6NKF7 AL030996.1-201ENST00000411430 235 ntBASIC5.3□□□□□ -1.56
TMEM88BA6NKF7 AL096701.2-201ENST00000416920 238 ntBASIC5.3□□□□□ -1.56
TMEM88BA6NKF7 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC5.3□□□□□ -1.56
TMEM88BA6NKF7 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC5.3□□□□□ -1.56
TMEM88BA6NKF7 AC009237.8-201ENST00000445492 379 ntBASIC5.3□□□□□ -1.56
TMEM88BA6NKF7 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC5.3□□□□□ -1.56
TMEM88BA6NKF7 SNRPCP3-201ENST00000474888 476 ntBASIC5.3□□□□□ -1.56
TMEM88BA6NKF7 AC068781.1-201ENST00000488231 618 ntBASIC5.3□□□□□ -1.56
TMEM88BA6NKF7 AC078817.1-201ENST00000492623 435 ntBASIC5.3□□□□□ -1.56
TMEM88BA6NKF7 AC021146.2-201ENST00000504736 556 ntBASIC5.3□□□□□ -1.56
TMEM88BA6NKF7 AC097486.1-201ENST00000515331 210 ntBASIC5.3□□□□□ -1.56
TMEM88BA6NKF7 SNORA70.16-201ENST00000516390 95 ntBASIC5.3□□□□□ -1.56
TMEM88BA6NKF7 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.3□□□□□ -1.56
TMEM88BA6NKF7 AC004024.1-201ENST00000549244 247 ntBASIC5.3□□□□□ -1.56
TMEM88BA6NKF7 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC5.3□□□□□ -1.56
TMEM88BA6NKF7 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC5.3□□□□□ -1.56
TMEM88BA6NKF7 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC5.3□□□□□ -1.56
TMEM88BA6NKF7 AC007390.2-201ENST00000606229 3803 ntBASIC5.3□□□□□ -1.56
TMEM88BA6NKF7 AC020634.1-201ENST00000608701 549 ntBASIC5.3□□□□□ -1.56
TMEM88BA6NKF7 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC5.3□□□□□ -1.56
TMEM88BA6NKF7 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.3□□□□□ -1.56
TMEM88BA6NKF7 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
TMEM88BA6NKF7 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TMEM88BA6NKF7 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
TMEM88BA6NKF7 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.3□□□□□ -1.56
TMEM88BA6NKF7 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
TMEM88BA6NKF7 AC026523.2-201ENST00000625039 7739 ntBASIC5.29□□□□□ -1.56
TMEM88BA6NKF7 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
TMEM88BA6NKF7 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
TMEM88BA6NKF7 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TMEM88BA6NKF7 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
TMEM88BA6NKF7 ZBTB8OSP1-201ENST00000342688 498 ntBASIC5.29□□□□□ -1.56
TMEM88BA6NKF7 RNA5SP130-201ENST00000364431 114 ntBASIC5.29□□□□□ -1.56
TMEM88BA6NKF7 RNU6-596P-201ENST00000365395 98 ntBASIC5.29□□□□□ -1.56
TMEM88BA6NKF7 RNA5SP167-201ENST00000365461 116 ntBASIC5.29□□□□□ -1.56
TMEM88BA6NKF7 SNORD73A-201ENST00000386062 65 ntBASIC5.29□□□□□ -1.56
TMEM88BA6NKF7 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
TMEM88BA6NKF7 RNU6-55P-201ENST00000411092 107 ntBASIC5.29□□□□□ -1.56
TMEM88BA6NKF7 SYF2P2-201ENST00000417620 583 ntBASIC5.29□□□□□ -1.56
TMEM88BA6NKF7 AC008267.5-201ENST00000424928 265 ntBASIC5.29□□□□□ -1.56
TMEM88BA6NKF7 AL627311.1-201ENST00000431514 115 ntBASIC5.29□□□□□ -1.56
TMEM88BA6NKF7 PIGFP3-201ENST00000441918 722 ntBASIC5.29□□□□□ -1.56
TMEM88BA6NKF7 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC5.29□□□□□ -1.56
TMEM88BA6NKF7 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TMEM88BA6NKF7 RPS23P3-201ENST00000470993 430 ntBASIC5.29□□□□□ -1.56
TMEM88BA6NKF7 RNU6-1046P-201ENST00000516538 107 ntBASIC5.29□□□□□ -1.56
TMEM88BA6NKF7 RNU6-699P-201ENST00000517081 110 ntBASIC5.29□□□□□ -1.56
TMEM88BA6NKF7 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC5.29□□□□□ -1.56
TMEM88BA6NKF7 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC5.29□□□□□ -1.56
TMEM88BA6NKF7 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC5.29□□□□□ -1.56
TMEM88BA6NKF7 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC5.29□□□□□ -1.56
TMEM88BA6NKF7 MIR4680-201ENST00000580906 66 ntBASIC5.29□□□□□ -1.56
TMEM88BA6NKF7 MIR4273-201ENST00000582824 84 ntBASIC5.29□□□□□ -1.56
TMEM88BA6NKF7 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC5.29□□□□□ -1.56
TMEM88BA6NKF7 AC019176.2-201ENST00000611579 315 ntBASIC5.29□□□□□ -1.56
TMEM88BA6NKF7 AL031658.2-201ENST00000616850 651 ntBASIC5.29□□□□□ -1.56
TMEM88BA6NKF7 AL132822.1-201ENST00000617063 513 ntBASIC5.29□□□□□ -1.56
TMEM88BA6NKF7 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.29□□□□□ -1.56
TMEM88BA6NKF7 TEX41-300ENST00000631048 69 ntTSL 5 BASIC5.29□□□□□ -1.56
TMEM88BA6NKF7 AL121839.2-201ENST00000565058 6943 ntBASIC5.29□□□□□ -1.56
TMEM88BA6NKF7 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
TMEM88BA6NKF7 NCAPGP1-201ENST00000505112 1814 ntBASIC5.29□□□□□ -1.56
TMEM88BA6NKF7 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
TMEM88BA6NKF7 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.29□□□□□ -1.56
TMEM88BA6NKF7 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
TMEM88BA6NKF7 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TMEM88BA6NKF7 AL136164.3-201ENST00000624429 3978 ntBASIC5.29□□□□□ -1.56
TMEM88BA6NKF7 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC5.29□□□□□ -1.56
TMEM88BA6NKF7 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 292.5 ms