Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AL590099.1-201ENST00000615276 138 ntBASIC4.51□□□□□ -1.69
EPHB3P54753 MIR6864-201ENST00000617935 70 ntBASIC4.51□□□□□ -1.69
EPHB3P54753 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
EPHB3P54753 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.51□□□□□ -1.69
EPHB3P54753 AL596275.2-204ENST00000641628 552 ntBASIC4.51□□□□□ -1.69
EPHB3P54753 AL596275.2-206ENST00000641957 626 ntBASIC4.51□□□□□ -1.69
EPHB3P54753 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
EPHB3P54753 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
EPHB3P54753 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.51□□□□□ -1.69
EPHB3P54753 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.51□□□□□ -1.69
EPHB3P54753 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
EPHB3P54753 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
EPHB3P54753 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.51□□□□□ -1.69
EPHB3P54753 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
EPHB3P54753 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
EPHB3P54753 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
EPHB3P54753 AC091812.1-201ENST00000432235 1948 ntBASIC4.5□□□□□ -1.69
EPHB3P54753 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
EPHB3P54753 AL049555.1-201ENST00000562834 1933 ntBASIC4.5□□□□□ -1.69
EPHB3P54753 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
EPHB3P54753 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
EPHB3P54753 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.5□□□□□ -1.69
EPHB3P54753 Y_RNA.152-201ENST00000363578 100 ntBASIC4.5□□□□□ -1.69
EPHB3P54753 RNU6-450P-201ENST00000364654 107 ntBASIC4.5□□□□□ -1.69
EPHB3P54753 Y_RNA.288-201ENST00000364854 92 ntBASIC4.5□□□□□ -1.69
EPHB3P54753 RNU1-64P-201ENST00000365443 163 ntBASIC4.5□□□□□ -1.69
EPHB3P54753 SNORD82-201ENST00000365530 70 ntBASIC4.5□□□□□ -1.69
EPHB3P54753 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
EPHB3P54753 AC019155.1-201ENST00000382242 574 ntBASIC4.5□□□□□ -1.69
EPHB3P54753 RNU6-472P-201ENST00000384299 107 ntBASIC4.5□□□□□ -1.69
EPHB3P54753 Y_RNA.473-201ENST00000384333 102 ntBASIC4.5□□□□□ -1.69
EPHB3P54753 RNU1-44P-201ENST00000384453 163 ntBASIC4.5□□□□□ -1.69
EPHB3P54753 RPLP0P7-201ENST00000416050 667 ntBASIC4.5□□□□□ -1.69
EPHB3P54753 RPL7P37-201ENST00000425095 738 ntBASIC4.5□□□□□ -1.69
EPHB3P54753 USMG5P1-201ENST00000425964 177 ntBASIC4.5□□□□□ -1.69
EPHB3P54753 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.5□□□□□ -1.69
EPHB3P54753 HIGD1AP11-201ENST00000438361 280 ntBASIC4.5□□□□□ -1.69
EPHB3P54753 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
EPHB3P54753 HMGB3P30-201ENST00000457863 606 ntBASIC4.5□□□□□ -1.69
EPHB3P54753 RPL23AP65-201ENST00000475608 468 ntBASIC4.5□□□□□ -1.69
EPHB3P54753 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.5□□□□□ -1.69
EPHB3P54753 AC108078.2-201ENST00000510750 236 ntBASIC4.5□□□□□ -1.69
EPHB3P54753 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.5□□□□□ -1.69
EPHB3P54753 RNA5SP360-201ENST00000516555 118 ntBASIC4.5□□□□□ -1.69
EPHB3P54753 RNU4-77P-201ENST00000516692 156 ntBASIC4.5□□□□□ -1.69
EPHB3P54753 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.5□□□□□ -1.69
EPHB3P54753 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
EPHB3P54753 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.5□□□□□ -1.69
EPHB3P54753 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.5□□□□□ -1.69
EPHB3P54753 AC093227.2-201ENST00000589357 285 ntBASIC4.5□□□□□ -1.69
EPHB3P54753 AL355810.1-201ENST00000614629 552 ntBASIC4.5□□□□□ -1.69
EPHB3P54753 AC141273.2-201ENST00000618989 130 ntBASIC4.5□□□□□ -1.69
EPHB3P54753 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
EPHB3P54753 AC243312.2-201ENST00000623340 601 ntBASIC4.5□□□□□ -1.69
EPHB3P54753 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
EPHB3P54753 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.5□□□□□ -1.69
EPHB3P54753 AC011978.2-201ENST00000569835 2054 ntBASIC4.5□□□□□ -1.69
EPHB3P54753 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
EPHB3P54753 ZNF33CP-201ENST00000432492 2030 ntBASIC4.5□□□□□ -1.69
EPHB3P54753 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
EPHB3P54753 LINC01109-201ENST00000603837 3081 ntBASIC4.49□□□□□ -1.69
EPHB3P54753 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
EPHB3P54753 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.49□□□□□ -1.69
EPHB3P54753 AC243428.1-201ENST00000421099 264 ntBASIC4.49□□□□□ -1.69
EPHB3P54753 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC4.49□□□□□ -1.69
EPHB3P54753 RPL23AP69-201ENST00000431134 458 ntBASIC4.49□□□□□ -1.69
EPHB3P54753 SNORD5.1-201ENST00000458800 75 ntBASIC4.49□□□□□ -1.69
EPHB3P54753 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.49□□□□□ -1.69
EPHB3P54753 AL132838.2-201ENST00000492041 314 ntBASIC4.49□□□□□ -1.69
EPHB3P54753 AC022493.2-201ENST00000506122 481 ntBASIC4.49□□□□□ -1.69
EPHB3P54753 SNORA14.1-201ENST00000516113 141 ntBASIC4.49□□□□□ -1.69
EPHB3P54753 RN7SKP82-201ENST00000516786 223 ntBASIC4.49□□□□□ -1.69
EPHB3P54753 AC134698.5-201ENST00000519444 336 ntBASIC4.49□□□□□ -1.69
EPHB3P54753 AC022616.4-201ENST00000522985 181 ntBASIC4.49□□□□□ -1.69
EPHB3P54753 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.49□□□□□ -1.69
EPHB3P54753 HNRNPCP4-201ENST00000571636 900 ntBASIC4.49□□□□□ -1.69
EPHB3P54753 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.49□□□□□ -1.69
EPHB3P54753 RN7SL600P-201ENST00000581811 299 ntBASIC4.49□□□□□ -1.69
EPHB3P54753 RPL7P50-201ENST00000600588 727 ntBASIC4.49□□□□□ -1.69
EPHB3P54753 RNF138P2-201ENST00000603490 592 ntBASIC4.49□□□□□ -1.69
EPHB3P54753 AC010201.1-201ENST00000605051 540 ntBASIC4.49□□□□□ -1.69
EPHB3P54753 ATP1B3P1-201ENST00000605365 821 ntBASIC4.49□□□□□ -1.69
EPHB3P54753 SNORD58B-201ENST00000607313 66 ntBASIC4.49□□□□□ -1.69
EPHB3P54753 SNX18P1Y-201ENST00000616231 511 ntBASIC4.49□□□□□ -1.69
EPHB3P54753 MTND5P7-201ENST00000413558 1798 ntBASIC4.49□□□□□ -1.69
EPHB3P54753 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
EPHB3P54753 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
EPHB3P54753 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
EPHB3P54753 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
EPHB3P54753 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
EPHB3P54753 EXOC5P1-201ENST00000510543 1969 ntBASIC4.49□□□□□ -1.69
EPHB3P54753 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
EPHB3P54753 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
EPHB3P54753 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
EPHB3P54753 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
EPHB3P54753 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
EPHB3P54753 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
EPHB3P54753 AL139811.1-201ENST00000424779 2299 ntBASIC4.48□□□□□ -1.69
EPHB3P54753 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.48□□□□□ -1.69
EPHB3P54753 AL592182.3-201ENST00000642132 3304 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 187.8 ms