Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 RNU6-1266P-201ENST00000362794 105 ntBASIC5□□□□□ -1.61
NFKB1P19838 MIR521-1-201ENST00000384902 87 ntBASIC5□□□□□ -1.61
NFKB1P19838 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5□□□□□ -1.61
NFKB1P19838 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC5□□□□□ -1.61
NFKB1P19838 MIR1298-201ENST00000408783 112 ntBASIC5□□□□□ -1.61
NFKB1P19838 RNA5SP494-201ENST00000410653 129 ntBASIC5□□□□□ -1.61
NFKB1P19838 Y_RNA.793-201ENST00000411222 111 ntBASIC5□□□□□ -1.61
NFKB1P19838 AL096701.2-201ENST00000416920 238 ntBASIC5□□□□□ -1.61
NFKB1P19838 AC093162.1-201ENST00000419682 124 ntBASIC5□□□□□ -1.61
NFKB1P19838 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC5□□□□□ -1.61
NFKB1P19838 AC073850.1-201ENST00000449243 255 ntBASIC5□□□□□ -1.61
NFKB1P19838 RN7SL319P-201ENST00000480656 221 ntBASIC5□□□□□ -1.61
NFKB1P19838 RPSAP50-201ENST00000481955 852 ntBASIC5□□□□□ -1.61
NFKB1P19838 AC087190.1-201ENST00000484462 480 ntBASIC5□□□□□ -1.61
NFKB1P19838 AC107032.1-201ENST00000485945 480 ntBASIC5□□□□□ -1.61
NFKB1P19838 AC022493.1-201ENST00000492984 337 ntBASIC5□□□□□ -1.61
NFKB1P19838 AC023424.1-201ENST00000496058 459 ntBASIC5□□□□□ -1.61
NFKB1P19838 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC5□□□□□ -1.61
NFKB1P19838 RNU6-1338P-201ENST00000516328 91 ntBASIC5□□□□□ -1.61
NFKB1P19838 AC091144.1-201ENST00000519573 138 ntBASIC5□□□□□ -1.61
NFKB1P19838 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5□□□□□ -1.61
NFKB1P19838 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC5□□□□□ -1.61
NFKB1P19838 CYCSP40-201ENST00000575927 294 ntBASIC5□□□□□ -1.61
NFKB1P19838 MIR4300-201ENST00000581016 96 ntBASIC5□□□□□ -1.61
NFKB1P19838 MIR4472-2-201ENST00000582069 67 ntBASIC5□□□□□ -1.61
NFKB1P19838 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5□□□□□ -1.61
NFKB1P19838 AC009314.1-201ENST00000603871 304 ntBASIC5□□□□□ -1.61
NFKB1P19838 MIR376A1-201ENST00000616574 68 ntBASIC5□□□□□ -1.61
NFKB1P19838 Z99571.1-201ENST00000636677 394 ntBASIC5□□□□□ -1.61
NFKB1P19838 AC132825.6-201ENST00000638861 357 ntBASIC5□□□□□ -1.61
NFKB1P19838 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
NFKB1P19838 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5□□□□□ -1.61
NFKB1P19838 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NFKB1P19838 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
NFKB1P19838 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
NFKB1P19838 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NFKB1P19838 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NFKB1P19838 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
NFKB1P19838 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
NFKB1P19838 RNU6-1249P-201ENST00000363237 111 ntBASIC4.99□□□□□ -1.61
NFKB1P19838 Y_RNA.291-201ENST00000364886 113 ntBASIC4.99□□□□□ -1.61
NFKB1P19838 RNU6-48P-201ENST00000384161 107 ntBASIC4.99□□□□□ -1.61
NFKB1P19838 DPPA2P3-201ENST00000411853 655 ntBASIC4.99□□□□□ -1.61
NFKB1P19838 TBCAP2-201ENST00000416175 326 ntBASIC4.99□□□□□ -1.61
NFKB1P19838 AL451062.2-201ENST00000427515 271 ntBASIC4.99□□□□□ -1.61
NFKB1P19838 MTND3P9-201ENST00000429526 346 ntBASIC4.99□□□□□ -1.61
NFKB1P19838 AL592045.1-201ENST00000429867 352 ntBASIC4.99□□□□□ -1.61
NFKB1P19838 HSPD1P21-201ENST00000436541 245 ntBASIC4.99□□□□□ -1.61
NFKB1P19838 AL589765.3-201ENST00000446084 462 ntBASIC4.99□□□□□ -1.61
NFKB1P19838 Y_RNA.644-201ENST00000459006 113 ntBASIC4.99□□□□□ -1.61
NFKB1P19838 U8.21-201ENST00000459536 136 ntBASIC4.99□□□□□ -1.61
NFKB1P19838 RN7SL517P-201ENST00000462240 305 ntBASIC4.99□□□□□ -1.61
NFKB1P19838 RN7SL97P-201ENST00000486780 299 ntBASIC4.99□□□□□ -1.61
NFKB1P19838 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.99□□□□□ -1.61
NFKB1P19838 APOOP4-201ENST00000513530 597 ntBASIC4.99□□□□□ -1.61
NFKB1P19838 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC4.99□□□□□ -1.61
NFKB1P19838 GMPSP1-201ENST00000514075 579 ntBASIC4.99□□□□□ -1.61
NFKB1P19838 RNU6-513P-201ENST00000516104 104 ntBASIC4.99□□□□□ -1.61
NFKB1P19838 Y_RNA.674-201ENST00000516362 113 ntBASIC4.99□□□□□ -1.61
NFKB1P19838 RNA5SP392-201ENST00000516905 112 ntBASIC4.99□□□□□ -1.61
NFKB1P19838 RN7SKP234-201ENST00000517173 224 ntBASIC4.99□□□□□ -1.61
NFKB1P19838 RNU6-1315P-201ENST00000517187 99 ntBASIC4.99□□□□□ -1.61
NFKB1P19838 AC051619.2-201ENST00000559063 397 ntBASIC4.99□□□□□ -1.61
NFKB1P19838 AC136932.1-201ENST00000574771 208 ntBASIC4.99□□□□□ -1.61
NFKB1P19838 AL713866.2-201ENST00000603579 219 ntBASIC4.99□□□□□ -1.61
NFKB1P19838 AC098826.3-201ENST00000603823 466 ntBASIC4.99□□□□□ -1.61
NFKB1P19838 AP000787.2-201ENST00000604432 568 ntBASIC4.99□□□□□ -1.61
NFKB1P19838 MIR8076-201ENST00000611401 83 ntBASIC4.99□□□□□ -1.61
NFKB1P19838 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NFKB1P19838 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.99□□□□□ -1.61
NFKB1P19838 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.99□□□□□ -1.61
NFKB1P19838 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NFKB1P19838 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
NFKB1P19838 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.99□□□□□ -1.61
NFKB1P19838 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
NFKB1P19838 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
NFKB1P19838 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.98□□□□□ -1.61
NFKB1P19838 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NFKB1P19838 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.98□□□□□ -1.61
NFKB1P19838 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
NFKB1P19838 Y_RNA.83-201ENST00000363005 113 ntBASIC4.98□□□□□ -1.61
NFKB1P19838 SNORD113-1-201ENST00000365321 69 ntBASIC4.98□□□□□ -1.61
NFKB1P19838 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
NFKB1P19838 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
NFKB1P19838 RNU6-882P-201ENST00000391025 103 ntBASIC4.98□□□□□ -1.61
NFKB1P19838 AL078599.1-201ENST00000402075 293 ntBASIC4.98□□□□□ -1.61
NFKB1P19838 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.98□□□□□ -1.61
NFKB1P19838 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.98□□□□□ -1.61
NFKB1P19838 RPL26P6-201ENST00000440913 438 ntBASIC4.98□□□□□ -1.61
NFKB1P19838 RN7SL177P-201ENST00000476596 299 ntBASIC4.98□□□□□ -1.61
NFKB1P19838 AC007686.1-201ENST00000488511 463 ntBASIC4.98□□□□□ -1.61
NFKB1P19838 AC010469.2-201ENST00000496412 480 ntBASIC4.98□□□□□ -1.61
NFKB1P19838 AC140172.1-201ENST00000502928 141 ntBASIC4.98□□□□□ -1.61
NFKB1P19838 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC4.98□□□□□ -1.61
NFKB1P19838 HMGB3P16-201ENST00000508037 287 ntBASIC4.98□□□□□ -1.61
NFKB1P19838 RNA5SP249-201ENST00000516127 99 ntBASIC4.98□□□□□ -1.61
NFKB1P19838 RNU6-927P-201ENST00000516199 100 ntBASIC4.98□□□□□ -1.61
NFKB1P19838 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.98□□□□□ -1.61
NFKB1P19838 CBX3P4-201ENST00000538909 354 ntBASIC4.98□□□□□ -1.61
NFKB1P19838 BNIP3P1-201ENST00000547295 580 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 192.8 ms