Protein–RNA interactions for Protein: O43474

KLF4, Krueppel-like factor 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4O43474 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
KLF4O43474 LINC01355-201ENST00000566551 5444 ntBASIC4.31□□□□□ -1.72
KLF4O43474 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
KLF4O43474 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.31□□□□□ -1.72
KLF4O43474 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.31□□□□□ -1.72
KLF4O43474 RNU6-37P-201ENST00000362692 107 ntBASIC4.31□□□□□ -1.72
KLF4O43474 RNU6-11P-201ENST00000364234 107 ntBASIC4.31□□□□□ -1.72
KLF4O43474 RNU6-7-201ENST00000364784 107 ntBASIC4.31□□□□□ -1.72
KLF4O43474 RNU6-8-201ENST00000365467 107 ntBASIC4.31□□□□□ -1.72
KLF4O43474 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
KLF4O43474 RNU6-25P-201ENST00000383873 107 ntBASIC4.31□□□□□ -1.72
KLF4O43474 RNU6-1-201ENST00000383898 107 ntBASIC4.31□□□□□ -1.72
KLF4O43474 RNU6-48P-201ENST00000384161 107 ntBASIC4.31□□□□□ -1.72
KLF4O43474 RNU6-36P-201ENST00000384172 107 ntBASIC4.31□□□□□ -1.72
KLF4O43474 RNU6-4P-201ENST00000384205 107 ntBASIC4.31□□□□□ -1.72
KLF4O43474 RNU6-5P-201ENST00000384238 107 ntBASIC4.31□□□□□ -1.72
KLF4O43474 RNU6-3P-201ENST00000384314 107 ntBASIC4.31□□□□□ -1.72
KLF4O43474 RNU6-16P-201ENST00000384385 107 ntBASIC4.31□□□□□ -1.72
KLF4O43474 RNU6-15P-201ENST00000384534 107 ntBASIC4.31□□□□□ -1.72
KLF4O43474 RNU6-2-201ENST00000384627 107 ntBASIC4.31□□□□□ -1.72
KLF4O43474 RNU6-29P-201ENST00000384637 107 ntBASIC4.31□□□□□ -1.72
KLF4O43474 RNU6-9-201ENST00000384776 107 ntBASIC4.31□□□□□ -1.72
KLF4O43474 RNU6-33P-201ENST00000384793 107 ntBASIC4.31□□□□□ -1.72
KLF4O43474 RNU6-328P-201ENST00000390887 106 ntBASIC4.31□□□□□ -1.72
KLF4O43474 MIR888-201ENST00000401186 77 ntBASIC4.31□□□□□ -1.72
KLF4O43474 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.31□□□□□ -1.72
KLF4O43474 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.31□□□□□ -1.72
KLF4O43474 AF228730.4-201ENST00000421457 183 ntBASIC4.31□□□□□ -1.72
KLF4O43474 PCMTD1P1-201ENST00000455560 355 ntBASIC4.31□□□□□ -1.72
KLF4O43474 RNU7-152P-201ENST00000458982 64 ntBASIC4.31□□□□□ -1.72
KLF4O43474 AC128713.1-201ENST00000471495 306 ntBASIC4.31□□□□□ -1.72
KLF4O43474 RN7SL860P-201ENST00000473738 223 ntBASIC4.31□□□□□ -1.72
KLF4O43474 RN7SL817P-201ENST00000480777 288 ntBASIC4.31□□□□□ -1.72
KLF4O43474 OR51K1P-201ENST00000510214 950 ntBASIC4.31□□□□□ -1.72
KLF4O43474 RNU6-307P-201ENST00000516743 106 ntBASIC4.31□□□□□ -1.72
KLF4O43474 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.31□□□□□ -1.72
KLF4O43474 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
KLF4O43474 TOMM20P2-201ENST00000540082 421 ntBASIC4.31□□□□□ -1.72
KLF4O43474 AL163153.1-201ENST00000554223 283 ntBASIC4.31□□□□□ -1.72
KLF4O43474 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC4.31□□□□□ -1.72
KLF4O43474 AC233702.9-201ENST00000581528 203 ntBASIC4.31□□□□□ -1.72
KLF4O43474 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.31□□□□□ -1.72
KLF4O43474 BNIP3P22-201ENST00000593399 556 ntBASIC4.31□□□□□ -1.72
KLF4O43474 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.31□□□□□ -1.72
KLF4O43474 AC234771.5-201ENST00000600161 514 ntBASIC4.31□□□□□ -1.72
KLF4O43474 AC068790.4-201ENST00000602474 263 ntBASIC4.31□□□□□ -1.72
KLF4O43474 AC008121.1-201ENST00000603244 268 ntBASIC4.31□□□□□ -1.72
KLF4O43474 AL160281.1-201ENST00000605307 311 ntBASIC4.31□□□□□ -1.72
KLF4O43474 RNU6-6P-201ENST00000606623 107 ntBASIC4.31□□□□□ -1.72
KLF4O43474 AL161423.1-201ENST00000613700 262 ntBASIC4.31□□□□□ -1.72
KLF4O43474 MIR6780A-201ENST00000615089 68 ntBASIC4.31□□□□□ -1.72
KLF4O43474 MIR7703-201ENST00000620784 77 ntBASIC4.31□□□□□ -1.72
KLF4O43474 Z69720.2-201ENST00000624755 279 ntBASIC4.31□□□□□ -1.72
KLF4O43474 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.31□□□□□ -1.72
KLF4O43474 AC134503.1-201ENST00000633048 54 ntBASIC4.31□□□□□ -1.72
KLF4O43474 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
KLF4O43474 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
KLF4O43474 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
KLF4O43474 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
KLF4O43474 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
KLF4O43474 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
KLF4O43474 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
KLF4O43474 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
KLF4O43474 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
KLF4O43474 MFSD8-216ENST00000641147 4009 ntBASIC4.3□□□□□ -1.72
KLF4O43474 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
KLF4O43474 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
KLF4O43474 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.3□□□□□ -1.72
KLF4O43474 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
KLF4O43474 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.3□□□□□ -1.72
KLF4O43474 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.3□□□□□ -1.72
KLF4O43474 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
KLF4O43474 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
KLF4O43474 AC079741.1-201ENST00000321498 212 ntBASIC4.3□□□□□ -1.72
KLF4O43474 Y_RNA.128-201ENST00000363391 112 ntBASIC4.3□□□□□ -1.72
KLF4O43474 MIR195-201ENST00000385194 87 ntBASIC4.3□□□□□ -1.72
KLF4O43474 SNORA75.4-201ENST00000391278 119 ntBASIC4.3□□□□□ -1.72
KLF4O43474 U3.30-201ENST00000391308 210 ntBASIC4.3□□□□□ -1.72
KLF4O43474 RPL21P17-201ENST00000397467 475 ntBASIC4.3□□□□□ -1.72
KLF4O43474 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
KLF4O43474 RPL5P18-201ENST00000406671 891 ntBASIC4.3□□□□□ -1.72
KLF4O43474 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
KLF4O43474 RNU6-1050P-201ENST00000410388 107 ntBASIC4.3□□□□□ -1.72
KLF4O43474 Z99755.1-201ENST00000414048 380 ntBASIC4.3□□□□□ -1.72
KLF4O43474 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC4.3□□□□□ -1.72
KLF4O43474 AL353729.1-201ENST00000425044 720 ntBASIC4.3□□□□□ -1.72
KLF4O43474 AC097713.2-201ENST00000430199 356 ntBASIC4.3□□□□□ -1.72
KLF4O43474 HIGD1AP11-201ENST00000438361 280 ntBASIC4.3□□□□□ -1.72
KLF4O43474 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.3□□□□□ -1.72
KLF4O43474 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.3□□□□□ -1.72
KLF4O43474 AC009220.1-201ENST00000451614 275 ntBASIC4.3□□□□□ -1.72
KLF4O43474 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.3□□□□□ -1.72
KLF4O43474 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.3□□□□□ -1.72
KLF4O43474 AC018437.1-201ENST00000492214 406 ntBASIC4.3□□□□□ -1.72
KLF4O43474 MTCYBP40-201ENST00000509390 1135 ntBASIC4.3□□□□□ -1.72
KLF4O43474 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.3□□□□□ -1.72
KLF4O43474 RNU1-103P-201ENST00000516502 125 ntBASIC4.3□□□□□ -1.72
KLF4O43474 IGKV1-32-201ENST00000519290 311 ntBASIC4.3□□□□□ -1.72
KLF4O43474 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.3□□□□□ -1.72
KLF4O43474 NACAP3-201ENST00000552100 481 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 285.9 ms