RNA–Protein interactions for RNA: ENST00000367975.6

SDHC-202, Transcript of succinate dehydrogenase complex subunit C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHC, Length 13,566 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-202ENST00000367975 PELP1Q8IZL8 1130 aaKnown RBP8.49□□□□□ -1.05
SDHC-202ENST00000367975 DCAF8L2P0C7V8 631 aa8.33□□□□□ -1.08
SDHC-202ENST00000367975 NISCHQ9Y2I1 1504 aa8.08□□□□□ -1.12
SDHC-202ENST00000367975 CCER1Q8TC90 406 aaPredicted RBP8.04□□□□□ -1.12
SDHC-202ENST00000367975 SUPT5HO00267 1087 aaKnown RBP8.03□□□□□ -1.12
SDHC-202ENST00000367975 MYT1Q01538 1121 aa8□□□□□ -1.13
SDHC-202ENST00000367975 APLP2Q06481 763 aa8□□□□□ -1.13
SDHC-202ENST00000367975 ERICH6Q7L0X2 663 aa7.98□□□□□ -1.13
SDHC-202ENST00000367975 CENPBP07199 599 aaPredicted RBP7.94□□□□□ -1.14
SDHC-202ENST00000367975 FAM9AQ8IZU1 332 aaPredicted RBP7.91□□□□□ -1.14
SDHC-202ENST00000367975 SHROOM4Q9ULL8 1493 aa7.87□□□□□ -1.15
SDHC-202ENST00000367975 ZEB1P37275 1124 aaPredicted RBP7.8□□□□□ -1.16
SDHC-202ENST00000367975 NEFLP07196 543 aa7.8□□□□□ -1.16
SDHC-202ENST00000367975 EHMT2Q96KQ7 1210 aa7.79□□□□□ -1.16
SDHC-202ENST00000367975 YTHDC1Q96MU7 727 aaKnown RBP7.7□□□□□ -1.18
SDHC-202ENST00000367975 PCGF6Q9BYE7 350 aa7.67□□□□□ -1.18
SDHC-202ENST00000367975 DAXXQ9UER7 740 aaPredicted RBP7.65□□□□□ -1.18
SDHC-202ENST00000367975 TTBK1Q5TCY1 1321 aaPredicted RBP7.63□□□□□ -1.19
SDHC-202ENST00000367975 TRIM41Q8WV44 630 aa7.51□□□□□ -1.21
SDHC-202ENST00000367975 RANGAP1P46060 587 aaPredicted RBP7.47□□□□□ -1.21
SDHC-202ENST00000367975 ZNF316A6NFI3 1004 aaPredicted RBP7.47□□□□□ -1.21
SDHC-202ENST00000367975 RTL5Q5HYW3 569 aaPredicted RBP7.47□□□□□ -1.21
SDHC-202ENST00000367975 UBTFP17480 764 aaKnown RBP7.45□□□□□ -1.22
SDHC-202ENST00000367975 ATP1B4Q9UN42 357 aaPredicted RBP7.45□□□□□ -1.22
SDHC-202ENST00000367975 TRIM26Q12899 539 aaPredicted RBP7.36□□□□□ -1.23
SDHC-202ENST00000367975 CLSPNQ9HAW4 1339 aa7.35□□□□□ -1.23
SDHC-202ENST00000367975 HRCP23327 699 aa7.3□□□□□ -1.24
SDHC-202ENST00000367975 POLR3GLQ9BT43 218 aa7.28□□□□□ -1.24
SDHC-202ENST00000367975 MYT1LQ9UL68 1186 aa7.24□□□□□ -1.25
SDHC-202ENST00000367975 GLIPR1L2Q4G1C9 344 aa7.23□□□□□ -1.25
SDHC-202ENST00000367975 ZBTB47Q9UFB7 747 aaPredicted RBP7.22□□□□□ -1.25
SDHC-202ENST00000367975 DIEXFQ68CQ4 756 aaKnown RBP7.21□□□□□ -1.26
SDHC-202ENST00000367975 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.2□□□□□ -1.26
SDHC-202ENST00000367975 HNRNPUL2Q1KMD3 747 aaKnown RBP7.2□□□□□ -1.26
SDHC-202ENST00000367975 SLC4A1APQ9BWU0 796 aaKnown RBP7.2□□□□□ -1.26
SDHC-202ENST00000367975 ITGAEP38570 1179 aa7.18□□□□□ -1.26
SDHC-202ENST00000367975 CANXP27824 592 aaKnown RBP7.17□□□□□ -1.26
SDHC-202ENST00000367975 CDK11AQ9UQ88 783 aaPredicted RBP7.17□□□□□ -1.26
SDHC-202ENST00000367975 PPARGC1BQ86YN6 1023 aaKnown RBP7.17□□□□□ -1.26
SDHC-202ENST00000367975 ANP32AP39687 249 aaKnown RBP7.16□□□□□ -1.26
SDHC-202ENST00000367975 ANP32BQ92688 251 aaKnown RBP7.14□□□□□ -1.27
SDHC-202ENST00000367975 CNGB1Q14028 1251 aaPredicted RBP7.13□□□□□ -1.27
SDHC-202ENST00000367975 CHIC1Q5VXU3 224 aa7.12□□□□□ -1.27
SDHC-202ENST00000367975 NEFMP07197 916 aa7.12□□□□□ -1.27
SDHC-202ENST00000367975 ANP32CO43423 234 aa7.08□□□□□ -1.28
SDHC-202ENST00000367975 FAM50AQ14320 339 aaKnown RBP7.07□□□□□ -1.28
SDHC-202ENST00000367975 UPF2Q9HAU5 1272 aaKnown RBP7.06□□□□□ -1.28
SDHC-202ENST00000367975 GTF3C3Q9Y5Q9 886 aa7.05□□□□□ -1.28
SDHC-202ENST00000367975 ZNF326Q5BKZ1 582 aaKnown RBP7.05□□□□□ -1.28
SDHC-202ENST00000367975 BCANQ96GW7 911 aa7.04□□□□□ -1.28
SDHC-202ENST00000367975 HSP90AA1P07900 732 aaKnown RBP7.04□□□□□ -1.28
SDHC-202ENST00000367975 CCDC180Q9P1Z9 1646 aa7.03□□□□□ -1.28
SDHC-202ENST00000367975 TRIM52Q96A61 297 aa7.02□□□□□ -1.29
SDHC-202ENST00000367975 EIF5BO60841 1220 aaKnown RBP7.02□□□□□ -1.29
SDHC-202ENST00000367975 SLC24A1O60721 1099 aa7□□□□□ -1.29
SDHC-202ENST00000367975 CDK11BP21127 795 aaKnown RBP6.97□□□□□ -1.29
SDHC-202ENST00000367975 NEUROD1Q13562 356 aa6.96□□□□□ -1.29
SDHC-202ENST00000367975 NPM2Q86SE8 214 aaKnown RBP6.96□□□□□ -1.3
SDHC-202ENST00000367975 BCL11AQ9H165 835 aa6.95□□□□□ -1.3
SDHC-202ENST00000367975 TONSLQ96HA7 1378 aa6.95□□□□□ -1.3
SDHC-202ENST00000367975 SCRIBQ14160 1630 aa6.94□□□□□ -1.3
SDHC-202ENST00000367975 ACIN1Q9UKV3 1341 aaKnown RBP6.94□□□□□ -1.3
SDHC-202ENST00000367975 DCAF1Q9Y4B6 1507 aa6.93□□□□□ -1.3
SDHC-202ENST00000367975 LOC105371045A0A1W2PR82 267 aa6.92□□□□□ -1.3
SDHC-202ENST00000367975 TNNT2P45379 298 aaPredicted RBP6.91□□□□□ -1.3
SDHC-202ENST00000367975 MYH16Q9H6N6 1097 aa6.9□□□□□ -1.31
SDHC-202ENST00000367975 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.89□□□□□ -1.31
SDHC-202ENST00000367975 ANP32EQ9BTT0 268 aa6.86□□□□□ -1.31
SDHC-202ENST00000367975 BECN1Q14457 450 aa6.85□□□□□ -1.31
SDHC-202ENST00000367975 FKBP8Q14318 412 aa6.85□□□□□ -1.31
SDHC-202ENST00000367975 ZRSR1Q15695 479 aaKnown RBP6.84□□□□□ -1.31
SDHC-202ENST00000367975 TRIM44Q96DX7 344 aaPredicted RBP6.84□□□□□ -1.31
SDHC-202ENST00000367975 HNRNPUQ00839 825 aaKnown RBP eCLIP6.83□□□□□ -1.32
SDHC-202ENST00000367975 ABCC9O60706 1549 aa6.83□□□□□ -1.32
SDHC-202ENST00000367975 NCLP19338 710 aaKnown RBP6.83□□□□□ -1.32
SDHC-202ENST00000367975 NBR1Q14596 966 aa6.82□□□□□ -1.32
SDHC-202ENST00000367975 CCDC136Q96JN2 1154 aa6.82□□□□□ -1.32
SDHC-202ENST00000367975 GOLGA6L22H0YM25 854 aa6.82□□□□□ -1.32
SDHC-202ENST00000367975 DDRGK1Q96HY6 314 aa6.82□□□□□ -1.32
SDHC-202ENST00000367975 ESF1Q9H501 851 aaKnown RBP6.82□□□□□ -1.32
SDHC-202ENST00000367975 ARXQ96QS3 562 aa6.82□□□□□ -1.32
SDHC-202ENST00000367975 GOLGA6L6A8MZA4 724 aa6.81□□□□□ -1.32
SDHC-202ENST00000367975 CASC1Q6TDU7 716 aa6.81□□□□□ -1.32
SDHC-202ENST00000367975 WDR43Q15061 677 aaKnown RBP eCLIP6.79□□□□□ -1.32
SDHC-202ENST00000367975 ERICH6BQ5W0A0 696 aa6.79□□□□□ -1.32
SDHC-202ENST00000367975 FBLN2P98095 1184 aa6.77□□□□□ -1.33
SDHC-202ENST00000367975 PTMAP06454 111 aaKnown RBP6.76□□□□□ -1.33
SDHC-202ENST00000367975 FAM9BQ8IZU0 186 aa6.75□□□□□ -1.33
SDHC-202ENST00000367975 TMC1Q8TDI8 760 aa6.75□□□□□ -1.33
SDHC-202ENST00000367975 STAG3Q9UJ98 1225 aa6.74□□□□□ -1.33
SDHC-202ENST00000367975 ZNF777Q9ULD5 760 aaPredicted RBP6.74□□□□□ -1.33
SDHC-202ENST00000367975 DNTTIP2Q5QJE6 756 aaKnown RBP6.73□□□□□ -1.33
SDHC-202ENST00000367975 CHAF1AQ13111 956 aaPredicted RBP6.73□□□□□ -1.33
SDHC-202ENST00000367975 CLIP1P30622 1438 aa6.73□□□□□ -1.33
SDHC-202ENST00000367975 ZCCHC6Q5VYS8 1495 aaKnown RBP6.73□□□□□ -1.33
SDHC-202ENST00000367975 NRDCO43847 1150 aa6.72□□□□□ -1.33
SDHC-202ENST00000367975 RB1CC1Q8TDY2 1594 aa6.72□□□□□ -1.33
SDHC-202ENST00000367975 MRS2Q9HD23 443 aa6.72□□□□□ -1.33
SDHC-202ENST00000367975 MTUS2Q5JR59 1369 aa6.71□□□□□ -1.34
SDHC-202ENST00000367975 RSF1Q96T23 1441 aaPredicted RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms