Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 MTND5P9-201ENST00000503854 1755 ntBASIC5.03□□□□□ -1.6
NFKB1P19838 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NFKB1P19838 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
NFKB1P19838 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.03□□□□□ -1.6
NFKB1P19838 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.03□□□□□ -1.6
NFKB1P19838 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NFKB1P19838 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
NFKB1P19838 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.02□□□□□ -1.61
NFKB1P19838 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
NFKB1P19838 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NFKB1P19838 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
NFKB1P19838 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.02□□□□□ -1.61
NFKB1P19838 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
NFKB1P19838 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
NFKB1P19838 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
NFKB1P19838 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
NFKB1P19838 RPL9P7-201ENST00000330965 580 ntBASIC5.02□□□□□ -1.61
NFKB1P19838 RNA5SP52-201ENST00000362448 134 ntBASIC5.02□□□□□ -1.61
NFKB1P19838 Y_RNA.269-201ENST00000364685 89 ntBASIC5.02□□□□□ -1.61
NFKB1P19838 RNU6-378P-201ENST00000384324 107 ntBASIC5.02□□□□□ -1.61
NFKB1P19838 SNORD115-46-201ENST00000390982 71 ntBASIC5.02□□□□□ -1.61
NFKB1P19838 RNU6-712P-201ENST00000410558 100 ntBASIC5.02□□□□□ -1.61
NFKB1P19838 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC5.02□□□□□ -1.61
NFKB1P19838 EI24P1-201ENST00000416584 867 ntBASIC5.02□□□□□ -1.61
NFKB1P19838 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.02□□□□□ -1.61
NFKB1P19838 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.02□□□□□ -1.61
NFKB1P19838 USP9YP7-201ENST00000436723 430 ntBASIC5.02□□□□□ -1.61
NFKB1P19838 AL513043.1-201ENST00000439124 535 ntBASIC5.02□□□□□ -1.61
NFKB1P19838 AL591623.2-201ENST00000449978 222 ntBASIC5.02□□□□□ -1.61
NFKB1P19838 USP9YP32-201ENST00000452432 430 ntBASIC5.02□□□□□ -1.61
NFKB1P19838 AL136097.1-201ENST00000456945 913 ntBASIC5.02□□□□□ -1.61
NFKB1P19838 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.02□□□□□ -1.61
NFKB1P19838 RPL9P9-202ENST00000466501 579 ntBASIC5.02□□□□□ -1.61
NFKB1P19838 RPS15AP34-201ENST00000487776 387 ntBASIC5.02□□□□□ -1.61
NFKB1P19838 HMGN1P11-201ENST00000508668 303 ntBASIC5.02□□□□□ -1.61
NFKB1P19838 ENPP7P9-201ENST00000514456 627 ntBASIC5.02□□□□□ -1.61
NFKB1P19838 RN7SKP66-201ENST00000516681 231 ntBASIC5.02□□□□□ -1.61
NFKB1P19838 RNU6-255P-201ENST00000516957 105 ntBASIC5.02□□□□□ -1.61
NFKB1P19838 RN7SKP147-201ENST00000517154 244 ntBASIC5.02□□□□□ -1.61
NFKB1P19838 AC022868.1-201ENST00000517767 391 ntBASIC5.02□□□□□ -1.61
NFKB1P19838 AC027308.1-201ENST00000517993 110 ntBASIC5.02□□□□□ -1.61
NFKB1P19838 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC5.02□□□□□ -1.61
NFKB1P19838 MIR4512-201ENST00000583257 77 ntBASIC5.02□□□□□ -1.61
NFKB1P19838 MIR4443-201ENST00000585052 53 ntBASIC5.02□□□□□ -1.61
NFKB1P19838 AC243829.7-201ENST00000633081 225 ntBASIC5.02□□□□□ -1.61
NFKB1P19838 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
NFKB1P19838 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NFKB1P19838 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
NFKB1P19838 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
NFKB1P19838 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
NFKB1P19838 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
NFKB1P19838 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.02□□□□□ -1.61
NFKB1P19838 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NFKB1P19838 AL672167.1-204ENST00000641875 3017 ntBASIC5.02□□□□□ -1.61
NFKB1P19838 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NFKB1P19838 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NFKB1P19838 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
NFKB1P19838 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
NFKB1P19838 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
NFKB1P19838 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NFKB1P19838 ANKRD36BP1-201ENST00000358576 1779 ntBASIC5.01□□□□□ -1.61
NFKB1P19838 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NFKB1P19838 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NFKB1P19838 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
NFKB1P19838 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
NFKB1P19838 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
NFKB1P19838 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
NFKB1P19838 Y_RNA.277-201ENST00000364754 102 ntBASIC5.01□□□□□ -1.61
NFKB1P19838 RNU6-76P-201ENST00000384060 104 ntBASIC5.01□□□□□ -1.61
NFKB1P19838 MIR765-201ENST00000390226 114 ntBASIC5.01□□□□□ -1.61
NFKB1P19838 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
NFKB1P19838 AL357515.1-201ENST00000402967 542 ntBASIC5.01□□□□□ -1.61
NFKB1P19838 MIR1178-201ENST00000408396 91 ntBASIC5.01□□□□□ -1.61
NFKB1P19838 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.01□□□□□ -1.61
NFKB1P19838 AC004938.1-201ENST00000438468 308 ntBASIC5.01□□□□□ -1.61
NFKB1P19838 AC073587.1-201ENST00000447093 876 ntBASIC5.01□□□□□ -1.61
NFKB1P19838 AC000111.2-201ENST00000448200 210 ntBASIC5.01□□□□□ -1.61
NFKB1P19838 AL513124.1-201ENST00000450410 614 ntBASIC5.01□□□□□ -1.61
NFKB1P19838 snoU13.3-201ENST00000459441 104 ntBASIC5.01□□□□□ -1.61
NFKB1P19838 MIR892C-201ENST00000516410 77 ntBASIC5.01□□□□□ -1.61
NFKB1P19838 IGLV2-28-201ENST00000520681 304 ntBASIC5.01□□□□□ -1.61
NFKB1P19838 AC022790.1-201ENST00000522872 204 ntBASIC5.01□□□□□ -1.61
NFKB1P19838 AC008489.1-201ENST00000524271 483 ntBASIC5.01□□□□□ -1.61
NFKB1P19838 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.01□□□□□ -1.61
NFKB1P19838 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.01□□□□□ -1.61
NFKB1P19838 AC006557.5-201ENST00000603126 811 ntBASIC5.01□□□□□ -1.61
NFKB1P19838 AC034102.8-201ENST00000615146 484 ntBASIC5.01□□□□□ -1.61
NFKB1P19838 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC5.01□□□□□ -1.61
NFKB1P19838 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC5.01□□□□□ -1.61
NFKB1P19838 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.01□□□□□ -1.61
NFKB1P19838 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.01□□□□□ -1.61
NFKB1P19838 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC5.01□□□□□ -1.61
NFKB1P19838 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
NFKB1P19838 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NFKB1P19838 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.01□□□□□ -1.61
NFKB1P19838 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5□□□□□ -1.61
NFKB1P19838 HSPA8P1-201ENST00000425843 1833 ntBASIC5□□□□□ -1.61
NFKB1P19838 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NFKB1P19838 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
NFKB1P19838 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 181.3 ms