Protein–RNA interactions for Protein: O43474

KLF4, Krueppel-like factor 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4O43474 U6.99-201ENST00000637524 83 ntBASIC4.38□□□□□ -1.71
KLF4O43474 AC099654.10-201ENST00000640395 161 ntBASIC4.38□□□□□ -1.71
KLF4O43474 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
KLF4O43474 MTND4P23-201ENST00000447723 1363 ntBASIC4.38□□□□□ -1.71
KLF4O43474 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
KLF4O43474 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
KLF4O43474 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
KLF4O43474 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
KLF4O43474 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.37□□□□□ -1.71
KLF4O43474 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.37□□□□□ -1.71
KLF4O43474 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
KLF4O43474 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
KLF4O43474 SNORA40C-201ENST00000391285 128 ntBASIC4.37□□□□□ -1.71
KLF4O43474 AC098614.2-201ENST00000426040 255 ntBASIC4.37□□□□□ -1.71
KLF4O43474 RPL21P91-201ENST00000429231 479 ntBASIC4.37□□□□□ -1.71
KLF4O43474 MYL8P-204ENST00000431574 518 ntBASIC4.37□□□□□ -1.71
KLF4O43474 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.37□□□□□ -1.71
KLF4O43474 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.37□□□□□ -1.71
KLF4O43474 RPS29P33-201ENST00000456717 146 ntBASIC4.37□□□□□ -1.71
KLF4O43474 RPL23AP56-201ENST00000460778 453 ntBASIC4.37□□□□□ -1.71
KLF4O43474 RN7SL346P-201ENST00000491561 294 ntBASIC4.37□□□□□ -1.71
KLF4O43474 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
KLF4O43474 AC116337.1-201ENST00000509680 687 ntBASIC4.37□□□□□ -1.71
KLF4O43474 RNU1-86P-201ENST00000516108 154 ntBASIC4.37□□□□□ -1.71
KLF4O43474 RNU1-107P-201ENST00000516617 154 ntBASIC4.37□□□□□ -1.71
KLF4O43474 RNU6-1016P-201ENST00000516689 94 ntBASIC4.37□□□□□ -1.71
KLF4O43474 AC009902.1-201ENST00000519351 183 ntBASIC4.37□□□□□ -1.71
KLF4O43474 CASP1P1-201ENST00000526345 212 ntBASIC4.37□□□□□ -1.71
KLF4O43474 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.37□□□□□ -1.71
KLF4O43474 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.37□□□□□ -1.71
KLF4O43474 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.37□□□□□ -1.71
KLF4O43474 AC093249.4-201ENST00000564755 259 ntBASIC4.37□□□□□ -1.71
KLF4O43474 MIR4782-201ENST00000577987 79 ntBASIC4.37□□□□□ -1.71
KLF4O43474 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC4.37□□□□□ -1.71
KLF4O43474 FTX_3.1-201ENST00000610451 147 ntBASIC4.37□□□□□ -1.71
KLF4O43474 uc_338.18-201ENST00000615451 175 ntBASIC4.37□□□□□ -1.71
KLF4O43474 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.37□□□□□ -1.71
KLF4O43474 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
KLF4O43474 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
KLF4O43474 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
KLF4O43474 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.37□□□□□ -1.71
KLF4O43474 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
KLF4O43474 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.37□□□□□ -1.71
KLF4O43474 MUC2-202ENST00000613187 4845 ntBASIC4.37□□□□□ -1.71
KLF4O43474 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
KLF4O43474 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
KLF4O43474 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.36□□□□□ -1.71
KLF4O43474 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
KLF4O43474 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
KLF4O43474 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.36□□□□□ -1.71
KLF4O43474 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.36□□□□□ -1.71
KLF4O43474 Z95331.1-201ENST00000623075 23112 ntBASIC4.36□□□□□ -1.71
KLF4O43474 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
KLF4O43474 SNORD62.1-201ENST00000362541 86 ntBASIC4.36□□□□□ -1.71
KLF4O43474 Y_RNA.146-201ENST00000363549 102 ntBASIC4.36□□□□□ -1.71
KLF4O43474 RNU6-1329P-201ENST00000365664 107 ntBASIC4.36□□□□□ -1.71
KLF4O43474 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.36□□□□□ -1.71
KLF4O43474 RNU6-217P-201ENST00000384164 104 ntBASIC4.36□□□□□ -1.71
KLF4O43474 SNORA1.3-201ENST00000384676 136 ntBASIC4.36□□□□□ -1.71
KLF4O43474 MIR10A-201ENST00000385043 110 ntBASIC4.36□□□□□ -1.71
KLF4O43474 SNORD96B-201ENST00000386148 79 ntBASIC4.36□□□□□ -1.71
KLF4O43474 AL591034.1-201ENST00000407447 340 ntBASIC4.36□□□□□ -1.71
KLF4O43474 RNU6-954P-201ENST00000411355 107 ntBASIC4.36□□□□□ -1.71
KLF4O43474 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.36□□□□□ -1.71
KLF4O43474 AC245054.2-201ENST00000415639 319 ntBASIC4.36□□□□□ -1.71
KLF4O43474 AL096701.2-201ENST00000416920 238 ntBASIC4.36□□□□□ -1.71
KLF4O43474 HMGN2P30-201ENST00000423237 256 ntBASIC4.36□□□□□ -1.71
KLF4O43474 SKA2P1-201ENST00000425592 390 ntBASIC4.36□□□□□ -1.71
KLF4O43474 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.36□□□□□ -1.71
KLF4O43474 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.36□□□□□ -1.71
KLF4O43474 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.36□□□□□ -1.71
KLF4O43474 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.36□□□□□ -1.71
KLF4O43474 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.36□□□□□ -1.71
KLF4O43474 DEFB109F-201ENST00000491870 277 ntBASIC4.36□□□□□ -1.71
KLF4O43474 AC139453.3-201ENST00000493276 369 ntBASIC4.36□□□□□ -1.71
KLF4O43474 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
KLF4O43474 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.36□□□□□ -1.71
KLF4O43474 RNA5SP360-201ENST00000516555 118 ntBASIC4.36□□□□□ -1.71
KLF4O43474 RNU6-1153P-201ENST00000516760 105 ntBASIC4.36□□□□□ -1.71
KLF4O43474 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.36□□□□□ -1.71
KLF4O43474 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.36□□□□□ -1.71
KLF4O43474 HMGB1P14-201ENST00000557424 591 ntBASIC4.36□□□□□ -1.71
KLF4O43474 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.36□□□□□ -1.71
KLF4O43474 AL121932.1-201ENST00000605542 214 ntBASIC4.36□□□□□ -1.71
KLF4O43474 RNU6ATAC35P-201ENST00000609276 444 ntBASIC4.36□□□□□ -1.71
KLF4O43474 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC4.36□□□□□ -1.71
KLF4O43474 AC005086.4-201ENST00000623065 213 ntBASIC4.36□□□□□ -1.71
KLF4O43474 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
KLF4O43474 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.36□□□□□ -1.71
KLF4O43474 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
KLF4O43474 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
KLF4O43474 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
KLF4O43474 SDAD1P1-202ENST00000524156 2051 ntBASIC4.36□□□□□ -1.71
KLF4O43474 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.36□□□□□ -1.71
KLF4O43474 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
KLF4O43474 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
KLF4O43474 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
KLF4O43474 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.35□□□□□ -1.71
KLF4O43474 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
KLF4O43474 AC107068.1-201ENST00000563286 4218 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 201.8 ms