Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.45■□□□□ 0.54
KRT78Q8N1N4 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT78Q8N1N4 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.45■□□□□ 0.54
KRT78Q8N1N4 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
KRT78Q8N1N4 TSPY21P-201ENST00000433481 731 ntBASIC18.45■□□□□ 0.54
KRT78Q8N1N4 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
KRT78Q8N1N4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
KRT78Q8N1N4 AC098590.1-201ENST00000468126 897 ntBASIC18.45■□□□□ 0.54
KRT78Q8N1N4 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
KRT78Q8N1N4 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.45■□□□□ 0.54
KRT78Q8N1N4 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.45■□□□□ 0.54
KRT78Q8N1N4 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.45■□□□□ 0.54
KRT78Q8N1N4 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.45■□□□□ 0.54
KRT78Q8N1N4 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
KRT78Q8N1N4 AF186192.3-201ENST00000583427 947 ntBASIC18.45■□□□□ 0.54
KRT78Q8N1N4 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT78Q8N1N4 AC073195.1-201ENST00000607241 877 ntBASIC18.45■□□□□ 0.54
KRT78Q8N1N4 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT78Q8N1N4 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT78Q8N1N4 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
KRT78Q8N1N4 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT78Q8N1N4 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
KRT78Q8N1N4 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT78Q8N1N4 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
KRT78Q8N1N4 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
KRT78Q8N1N4 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.44■□□□□ 0.54
KRT78Q8N1N4 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
KRT78Q8N1N4 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
KRT78Q8N1N4 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
KRT78Q8N1N4 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRT78Q8N1N4 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRT78Q8N1N4 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRT78Q8N1N4 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRT78Q8N1N4 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
KRT78Q8N1N4 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
KRT78Q8N1N4 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRT78Q8N1N4 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRT78Q8N1N4 KRT16P1-201ENST00000399124 1418 ntBASIC18.44■□□□□ 0.54
KRT78Q8N1N4 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRT78Q8N1N4 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.44■□□□□ 0.54
KRT78Q8N1N4 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRT78Q8N1N4 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
KRT78Q8N1N4 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRT78Q8N1N4 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.44■□□□□ 0.54
KRT78Q8N1N4 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
KRT78Q8N1N4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
KRT78Q8N1N4 RPS2P4-201ENST00000476944 856 ntBASIC18.44■□□□□ 0.54
KRT78Q8N1N4 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.44■□□□□ 0.54
KRT78Q8N1N4 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
KRT78Q8N1N4 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
KRT78Q8N1N4 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.44■□□□□ 0.54
KRT78Q8N1N4 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.44■□□□□ 0.54
KRT78Q8N1N4 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.44■□□□□ 0.54
KRT78Q8N1N4 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.44■□□□□ 0.54
KRT78Q8N1N4 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.44■□□□□ 0.54
KRT78Q8N1N4 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRT78Q8N1N4 BX323043.1-201ENST00000641006 1765 ntBASIC18.44■□□□□ 0.54
KRT78Q8N1N4 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRT78Q8N1N4 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRT78Q8N1N4 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRT78Q8N1N4 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
KRT78Q8N1N4 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
KRT78Q8N1N4 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.43■□□□□ 0.54
KRT78Q8N1N4 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
KRT78Q8N1N4 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
KRT78Q8N1N4 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
KRT78Q8N1N4 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.43■□□□□ 0.54
KRT78Q8N1N4 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
KRT78Q8N1N4 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
KRT78Q8N1N4 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
KRT78Q8N1N4 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
KRT78Q8N1N4 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.43■□□□□ 0.54
KRT78Q8N1N4 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.43■□□□□ 0.54
KRT78Q8N1N4 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.43■□□□□ 0.54
KRT78Q8N1N4 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.43■□□□□ 0.54
KRT78Q8N1N4 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.43■□□□□ 0.54
KRT78Q8N1N4 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
KRT78Q8N1N4 CR392000.1-201ENST00000624770 1228 ntBASIC18.43■□□□□ 0.54
KRT78Q8N1N4 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
KRT78Q8N1N4 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
KRT78Q8N1N4 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.43■□□□□ 0.54
KRT78Q8N1N4 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
KRT78Q8N1N4 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.43■□□□□ 0.54
KRT78Q8N1N4 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
KRT78Q8N1N4 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
KRT78Q8N1N4 AC018445.3-201ENST00000624177 1945 ntBASIC18.43■□□□□ 0.54
KRT78Q8N1N4 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.43■□□□□ 0.54
KRT78Q8N1N4 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
KRT78Q8N1N4 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
KRT78Q8N1N4 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
KRT78Q8N1N4 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
KRT78Q8N1N4 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
KRT78Q8N1N4 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.42■□□□□ 0.54
KRT78Q8N1N4 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.42■□□□□ 0.54
KRT78Q8N1N4 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
KRT78Q8N1N4 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
KRT78Q8N1N4 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
KRT78Q8N1N4 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
KRT78Q8N1N4 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
KRT78Q8N1N4 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms