Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
PCDHB9Q9Y5E1 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
PCDHB9Q9Y5E1 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHB9Q9Y5E1 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
PCDHB9Q9Y5E1 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHB9Q9Y5E1 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHB9Q9Y5E1 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHB9Q9Y5E1 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHB9Q9Y5E1 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHB9Q9Y5E1 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHB9Q9Y5E1 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
PCDHB9Q9Y5E1 AL391987.6-201ENST00000305671 199 ntBASIC5.6□□□□□ -1.51
PCDHB9Q9Y5E1 Y_RNA.270-201ENST00000364693 104 ntBASIC5.6□□□□□ -1.51
PCDHB9Q9Y5E1 Y_RNA.274-201ENST00000364714 101 ntBASIC5.6□□□□□ -1.51
PCDHB9Q9Y5E1 RNU6-178P-201ENST00000384631 104 ntBASIC5.6□□□□□ -1.51
PCDHB9Q9Y5E1 MIR551A-201ENST00000385042 96 ntBASIC5.6□□□□□ -1.51
PCDHB9Q9Y5E1 GLULP6-201ENST00000399502 913 ntBASIC5.6□□□□□ -1.51
PCDHB9Q9Y5E1 RN7SKP17-201ENST00000411242 351 ntBASIC5.6□□□□□ -1.51
PCDHB9Q9Y5E1 EI24P1-201ENST00000416584 867 ntBASIC5.6□□□□□ -1.51
PCDHB9Q9Y5E1 OR6D1P-201ENST00000436165 939 ntBASIC5.6□□□□□ -1.51
PCDHB9Q9Y5E1 AC004938.1-201ENST00000438468 308 ntBASIC5.6□□□□□ -1.51
PCDHB9Q9Y5E1 RN7SL860P-201ENST00000473738 223 ntBASIC5.6□□□□□ -1.51
PCDHB9Q9Y5E1 RPS18P6-201ENST00000476880 458 ntBASIC5.6□□□□□ -1.51
PCDHB9Q9Y5E1 OR51K1P-201ENST00000510214 950 ntBASIC5.6□□□□□ -1.51
PCDHB9Q9Y5E1 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.6□□□□□ -1.51
PCDHB9Q9Y5E1 SNORD116-26-201ENST00000516006 96 ntBASIC5.6□□□□□ -1.51
PCDHB9Q9Y5E1 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.6□□□□□ -1.51
PCDHB9Q9Y5E1 AC122688.1-201ENST00000541494 223 ntBASIC5.6□□□□□ -1.51
PCDHB9Q9Y5E1 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC5.6□□□□□ -1.51
PCDHB9Q9Y5E1 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.6□□□□□ -1.51
PCDHB9Q9Y5E1 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC5.6□□□□□ -1.51
PCDHB9Q9Y5E1 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHB9Q9Y5E1 MIR1273C-201ENST00000578669 77 ntBASIC5.6□□□□□ -1.51
PCDHB9Q9Y5E1 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.6□□□□□ -1.51
PCDHB9Q9Y5E1 DLEU1_1.1-201ENST00000618107 190 ntBASIC5.6□□□□□ -1.51
PCDHB9Q9Y5E1 AC132068.1-201ENST00000623805 459 ntBASIC5.6□□□□□ -1.51
PCDHB9Q9Y5E1 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.6□□□□□ -1.51
PCDHB9Q9Y5E1 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHB9Q9Y5E1 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHB9Q9Y5E1 AC025470.1-201ENST00000510053 2032 ntBASIC5.6□□□□□ -1.51
PCDHB9Q9Y5E1 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHB9Q9Y5E1 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHB9Q9Y5E1 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
PCDHB9Q9Y5E1 MTND5P9-201ENST00000503854 1755 ntBASIC5.6□□□□□ -1.51
PCDHB9Q9Y5E1 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.59□□□□□ -1.51
PCDHB9Q9Y5E1 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHB9Q9Y5E1 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHB9Q9Y5E1 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
PCDHB9Q9Y5E1 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.59□□□□□ -1.51
PCDHB9Q9Y5E1 Z75746.1-201ENST00000440243 2080 ntBASIC5.59□□□□□ -1.51
PCDHB9Q9Y5E1 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHB9Q9Y5E1 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
PCDHB9Q9Y5E1 AC010266.2-201ENST00000564741 3255 ntBASIC5.59□□□□□ -1.51
PCDHB9Q9Y5E1 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHB9Q9Y5E1 STX3-208ENST00000641815 3236 ntBASIC5.59□□□□□ -1.51
PCDHB9Q9Y5E1 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
PCDHB9Q9Y5E1 UBE2L2-201ENST00000254302 429 ntBASIC5.59□□□□□ -1.51
PCDHB9Q9Y5E1 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHB9Q9Y5E1 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.59□□□□□ -1.51
PCDHB9Q9Y5E1 Y_RNA.27-201ENST00000362540 103 ntBASIC5.59□□□□□ -1.51
PCDHB9Q9Y5E1 Y_RNA.297-201ENST00000364950 91 ntBASIC5.59□□□□□ -1.51
PCDHB9Q9Y5E1 RNU6-746P-201ENST00000384112 109 ntBASIC5.59□□□□□ -1.51
PCDHB9Q9Y5E1 RNU6-837P-201ENST00000391056 108 ntBASIC5.59□□□□□ -1.51
PCDHB9Q9Y5E1 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.59□□□□□ -1.51
PCDHB9Q9Y5E1 AC007161.1-204ENST00000423039 460 ntBASIC5.59□□□□□ -1.51
PCDHB9Q9Y5E1 AL590762.4-201ENST00000425885 253 ntBASIC5.59□□□□□ -1.51
PCDHB9Q9Y5E1 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.59□□□□□ -1.51
PCDHB9Q9Y5E1 AC092647.2-201ENST00000452998 253 ntBASIC5.59□□□□□ -1.51
PCDHB9Q9Y5E1 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.59□□□□□ -1.51
PCDHB9Q9Y5E1 SNORD125-201ENST00000459538 96 ntBASIC5.59□□□□□ -1.51
PCDHB9Q9Y5E1 AC087588.1-201ENST00000462203 316 ntBASIC5.59□□□□□ -1.51
PCDHB9Q9Y5E1 RPL30P10-201ENST00000488148 337 ntBASIC5.59□□□□□ -1.51
PCDHB9Q9Y5E1 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC5.59□□□□□ -1.51
PCDHB9Q9Y5E1 AC074250.1-201ENST00000511117 192 ntBASIC5.59□□□□□ -1.51
PCDHB9Q9Y5E1 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC5.59□□□□□ -1.51
PCDHB9Q9Y5E1 AC067942.3-201ENST00000512025 362 ntBASIC5.59□□□□□ -1.51
PCDHB9Q9Y5E1 RNU4-71P-201ENST00000516258 113 ntBASIC5.59□□□□□ -1.51
PCDHB9Q9Y5E1 IGKV2-23-201ENST00000518729 323 ntBASIC5.59□□□□□ -1.51
PCDHB9Q9Y5E1 TRAV37-201ENST00000553906 342 ntBASIC5.59□□□□□ -1.51
PCDHB9Q9Y5E1 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.59□□□□□ -1.51
PCDHB9Q9Y5E1 MIR4646-201ENST00000580775 63 ntBASIC5.59□□□□□ -1.51
PCDHB9Q9Y5E1 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.59□□□□□ -1.51
PCDHB9Q9Y5E1 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
PCDHB9Q9Y5E1 AC012616.1-201ENST00000600294 197 ntBASIC5.59□□□□□ -1.51
PCDHB9Q9Y5E1 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.59□□□□□ -1.51
PCDHB9Q9Y5E1 AP000787.2-201ENST00000604432 568 ntBASIC5.59□□□□□ -1.51
PCDHB9Q9Y5E1 AL049539.1-201ENST00000611964 459 ntBASIC5.59□□□□□ -1.51
PCDHB9Q9Y5E1 AL353748.2-201ENST00000622148 471 ntBASIC5.59□□□□□ -1.51
PCDHB9Q9Y5E1 AC000095.2-202ENST00000637415 154 ntBASIC5.59□□□□□ -1.51
PCDHB9Q9Y5E1 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHB9Q9Y5E1 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHB9Q9Y5E1 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHB9Q9Y5E1 AC100778.3-201ENST00000580060 1750 ntBASIC5.59□□□□□ -1.51
PCDHB9Q9Y5E1 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.59□□□□□ -1.51
PCDHB9Q9Y5E1 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
PCDHB9Q9Y5E1 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.59□□□□□ -1.51
PCDHB9Q9Y5E1 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.52
PCDHB9Q9Y5E1 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.52
PCDHB9Q9Y5E1 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
PCDHB9Q9Y5E1 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 192.8 ms