Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.59□□□□□ -1.99
CCDC144AA2RUR9 AC016065.2-201ENST00000514530 444 ntBASIC2.59□□□□□ -1.99
CCDC144AA2RUR9 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC144AA2RUR9 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.59□□□□□ -1.99
CCDC144AA2RUR9 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CCDC144AA2RUR9 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -1.99
CCDC144AA2RUR9 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
CCDC144AA2RUR9 RNU6-1243P-201ENST00000364028 107 ntBASIC2.59□□□□□ -2
CCDC144AA2RUR9 SNORA14A-201ENST00000364773 135 ntBASIC2.59□□□□□ -2
CCDC144AA2RUR9 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.59□□□□□ -2
CCDC144AA2RUR9 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.59□□□□□ -2
CCDC144AA2RUR9 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -2
CCDC144AA2RUR9 PRRC2CP1-201ENST00000404428 159 ntBASIC2.59□□□□□ -2
CCDC144AA2RUR9 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.59□□□□□ -2
CCDC144AA2RUR9 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.59□□□□□ -2
CCDC144AA2RUR9 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.59□□□□□ -2
CCDC144AA2RUR9 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.59□□□□□ -2
CCDC144AA2RUR9 HSFY3P-201ENST00000444242 1191 ntBASIC2.59□□□□□ -2
CCDC144AA2RUR9 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.59□□□□□ -2
CCDC144AA2RUR9 snoU13.3-201ENST00000459441 104 ntBASIC2.59□□□□□ -2
CCDC144AA2RUR9 AC010285.1-201ENST00000470580 392 ntBASIC2.59□□□□□ -2
CCDC144AA2RUR9 RPS23P3-201ENST00000470993 430 ntBASIC2.59□□□□□ -2
CCDC144AA2RUR9 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC2.59□□□□□ -2
CCDC144AA2RUR9 AC005840.1-201ENST00000498412 377 ntBASIC2.59□□□□□ -2
CCDC144AA2RUR9 RNU6-491P-201ENST00000516099 110 ntBASIC2.59□□□□□ -2
CCDC144AA2RUR9 HMGN1P28-201ENST00000521340 364 ntBASIC2.59□□□□□ -2
CCDC144AA2RUR9 MIR3935-201ENST00000583472 104 ntBASIC2.59□□□□□ -2
CCDC144AA2RUR9 DUXAP9-208ENST00000622815 614 ntBASIC2.59□□□□□ -2
CCDC144AA2RUR9 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.59□□□□□ -2
CCDC144AA2RUR9 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.59□□□□□ -2
CCDC144AA2RUR9 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
CCDC144AA2RUR9 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.58□□□□□ -2
CCDC144AA2RUR9 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.58□□□□□ -2
CCDC144AA2RUR9 ANAPC10P1-201ENST00000395991 556 ntBASIC2.58□□□□□ -2
CCDC144AA2RUR9 AC073264.1-201ENST00000411508 416 ntBASIC2.58□□□□□ -2
CCDC144AA2RUR9 TAF9P1-201ENST00000445421 515 ntBASIC2.58□□□□□ -2
CCDC144AA2RUR9 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC2.58□□□□□ -2
CCDC144AA2RUR9 TAF9P2-201ENST00000454958 515 ntBASIC2.58□□□□□ -2
CCDC144AA2RUR9 AC105914.1-201ENST00000511798 226 ntBASIC2.58□□□□□ -2
CCDC144AA2RUR9 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.58□□□□□ -2
CCDC144AA2RUR9 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC2.58□□□□□ -2
CCDC144AA2RUR9 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.58□□□□□ -2
CCDC144AA2RUR9 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.58□□□□□ -2
CCDC144AA2RUR9 DUXAP4-201ENST00000603046 613 ntBASIC2.58□□□□□ -2
CCDC144AA2RUR9 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.58□□□□□ -2
CCDC144AA2RUR9 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
CCDC144AA2RUR9 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CCDC144AA2RUR9 AC010733.2-201ENST00000589496 5702 ntBASIC2.57□□□□□ -2
CCDC144AA2RUR9 AP002907.1-201ENST00000606361 1430 ntBASIC2.57□□□□□ -2
CCDC144AA2RUR9 SNORA67.5-201ENST00000391036 107 ntBASIC2.57□□□□□ -2
CCDC144AA2RUR9 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.57□□□□□ -2
CCDC144AA2RUR9 RPL23AP39-201ENST00000415533 405 ntBASIC2.57□□□□□ -2
CCDC144AA2RUR9 HMGN2P38-201ENST00000423806 265 ntBASIC2.57□□□□□ -2
CCDC144AA2RUR9 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.57□□□□□ -2
CCDC144AA2RUR9 AC067805.1-201ENST00000559344 470 ntBASIC2.57□□□□□ -2
CCDC144AA2RUR9 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.57□□□□□ -2
CCDC144AA2RUR9 OR4G1P-201ENST00000588632 938 ntBASIC2.57□□□□□ -2
CCDC144AA2RUR9 AC140725.3-201ENST00000616193 880 ntBASIC2.57□□□□□ -2
CCDC144AA2RUR9 AC010872.1-201ENST00000624225 675 ntBASIC2.57□□□□□ -2
CCDC144AA2RUR9 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
CCDC144AA2RUR9 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.56□□□□□ -2
CCDC144AA2RUR9 AL139276.1-201ENST00000311910 1001 ntBASIC2.56□□□□□ -2
CCDC144AA2RUR9 RNU6-98P-201ENST00000384173 107 ntBASIC2.56□□□□□ -2
CCDC144AA2RUR9 AL021407.1-201ENST00000404531 386 ntBASIC2.56□□□□□ -2
CCDC144AA2RUR9 RPL17P12-201ENST00000413391 526 ntBASIC2.56□□□□□ -2
CCDC144AA2RUR9 RPL21P32-201ENST00000419877 477 ntBASIC2.56□□□□□ -2
CCDC144AA2RUR9 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.56□□□□□ -2
CCDC144AA2RUR9 UBBP3-201ENST00000445497 241 ntBASIC2.56□□□□□ -2
CCDC144AA2RUR9 AL034418.1-201ENST00000448675 860 ntBASIC2.56□□□□□ -2
CCDC144AA2RUR9 snoU13.4-201ENST00000458916 104 ntBASIC2.56□□□□□ -2
CCDC144AA2RUR9 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.56□□□□□ -2
CCDC144AA2RUR9 SNORA31.20-201ENST00000517111 133 ntBASIC2.56□□□□□ -2
CCDC144AA2RUR9 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.56□□□□□ -2
CCDC144AA2RUR9 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.56□□□□□ -2
CCDC144AA2RUR9 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.56□□□□□ -2
CCDC144AA2RUR9 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.56□□□□□ -2
CCDC144AA2RUR9 AC008962.1-201ENST00000605729 304 ntBASIC2.56□□□□□ -2
CCDC144AA2RUR9 KPNA2P1-201ENST00000458289 1591 ntBASIC2.56□□□□□ -2
CCDC144AA2RUR9 AC093536.2-201ENST00000565257 1406 ntBASIC2.55□□□□□ -2
CCDC144AA2RUR9 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
CCDC144AA2RUR9 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.55□□□□□ -2
CCDC144AA2RUR9 SNORA16.1-201ENST00000364597 132 ntBASIC2.55□□□□□ -2
CCDC144AA2RUR9 RNU4-52P-201ENST00000384209 138 ntBASIC2.55□□□□□ -2
CCDC144AA2RUR9 RNU6-891P-201ENST00000384280 111 ntBASIC2.55□□□□□ -2
CCDC144AA2RUR9 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.55□□□□□ -2
CCDC144AA2RUR9 RPL7P29-201ENST00000437151 728 ntBASIC2.55□□□□□ -2
CCDC144AA2RUR9 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.55□□□□□ -2
CCDC144AA2RUR9 USP9YP15-201ENST00000442391 422 ntBASIC2.55□□□□□ -2
CCDC144AA2RUR9 AC004062.1-201ENST00000509926 645 ntBASIC2.55□□□□□ -2
CCDC144AA2RUR9 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
CCDC144AA2RUR9 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.55□□□□□ -2
CCDC144AA2RUR9 AC022690.1-201ENST00000526681 550 ntBASIC2.55□□□□□ -2
CCDC144AA2RUR9 DNAJC19P9-201ENST00000555084 351 ntBASIC2.55□□□□□ -2
CCDC144AA2RUR9 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC2.55□□□□□ -2
CCDC144AA2RUR9 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.55□□□□□ -2
CCDC144AA2RUR9 MIR8081-201ENST00000611533 95 ntBASIC2.55□□□□□ -2
CCDC144AA2RUR9 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.55□□□□□ -2
CCDC144AA2RUR9 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.55□□□□□ -2
CCDC144AA2RUR9 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.54□□□□□ -2
CCDC144AA2RUR9 RNU6-799P-201ENST00000363567 107 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 166.2 ms