Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.29□□□□□ -1.56
NFKB1P19838 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NFKB1P19838 ADAM5-202ENST00000399789 1942 ntBASIC5.29□□□□□ -1.56
NFKB1P19838 AC000374.1-201ENST00000434698 1745 ntBASIC5.28□□□□□ -1.56
NFKB1P19838 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
NFKB1P19838 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
NFKB1P19838 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
NFKB1P19838 Y_RNA.19-201ENST00000362462 99 ntBASIC5.28□□□□□ -1.56
NFKB1P19838 RNU6-1303P-201ENST00000364841 107 ntBASIC5.28□□□□□ -1.56
NFKB1P19838 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NFKB1P19838 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
NFKB1P19838 SNORA19-201ENST00000384737 128 ntBASIC5.28□□□□□ -1.56
NFKB1P19838 RPL21P67-201ENST00000402896 478 ntBASIC5.28□□□□□ -1.56
NFKB1P19838 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC5.28□□□□□ -1.56
NFKB1P19838 MTATP6P29-201ENST00000415057 132 ntBASIC5.28□□□□□ -1.56
NFKB1P19838 AL132765.1-201ENST00000434165 553 ntBASIC5.28□□□□□ -1.56
NFKB1P19838 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.28□□□□□ -1.56
NFKB1P19838 DAP3P1-201ENST00000441522 278 ntBASIC5.28□□□□□ -1.56
NFKB1P19838 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.28□□□□□ -1.56
NFKB1P19838 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.28□□□□□ -1.56
NFKB1P19838 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.28□□□□□ -1.56
NFKB1P19838 Z92846.1-201ENST00000456203 268 ntBASIC5.28□□□□□ -1.56
NFKB1P19838 HMGB1P25-201ENST00000468402 607 ntBASIC5.28□□□□□ -1.56
NFKB1P19838 AC018437.1-201ENST00000492214 406 ntBASIC5.28□□□□□ -1.56
NFKB1P19838 RPL7P23-201ENST00000493874 747 ntBASIC5.28□□□□□ -1.56
NFKB1P19838 HMGB1P35-201ENST00000503360 598 ntBASIC5.28□□□□□ -1.56
NFKB1P19838 AC005798.1-201ENST00000513715 387 ntBASIC5.28□□□□□ -1.56
NFKB1P19838 RN7SKP60-201ENST00000516985 239 ntBASIC5.28□□□□□ -1.56
NFKB1P19838 IGKV2D-23-201ENST00000518179 286 ntBASIC5.28□□□□□ -1.56
NFKB1P19838 IGKV2-18-201ENST00000522607 343 ntBASIC5.28□□□□□ -1.56
NFKB1P19838 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.28□□□□□ -1.56
NFKB1P19838 AL049839.1-201ENST00000556151 657 ntBASIC5.28□□□□□ -1.56
NFKB1P19838 AC084783.1-201ENST00000565846 910 ntBASIC5.28□□□□□ -1.56
NFKB1P19838 AC090517.1-201ENST00000569307 266 ntBASIC5.28□□□□□ -1.56
NFKB1P19838 IMMP1LP3-201ENST00000604197 224 ntBASIC5.28□□□□□ -1.56
NFKB1P19838 AC116447.1-201ENST00000613153 453 ntBASIC5.28□□□□□ -1.56
NFKB1P19838 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NFKB1P19838 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NFKB1P19838 AL359893.1-201ENST00000447628 1580 ntBASIC5.28□□□□□ -1.56
NFKB1P19838 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
NFKB1P19838 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.56
NFKB1P19838 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NFKB1P19838 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.27□□□□□ -1.57
NFKB1P19838 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NFKB1P19838 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
NFKB1P19838 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.27□□□□□ -1.57
NFKB1P19838 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.27□□□□□ -1.57
NFKB1P19838 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
NFKB1P19838 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.27□□□□□ -1.57
NFKB1P19838 RN7SKP115-201ENST00000363177 317 ntBASIC5.27□□□□□ -1.57
NFKB1P19838 RNA5SP435-201ENST00000364044 108 ntBASIC5.27□□□□□ -1.57
NFKB1P19838 RNU4-50P-201ENST00000364361 141 ntBASIC5.27□□□□□ -1.57
NFKB1P19838 AL590704.1-201ENST00000402856 794 ntBASIC5.27□□□□□ -1.57
NFKB1P19838 RN7SKP206-201ENST00000410823 293 ntBASIC5.27□□□□□ -1.57
NFKB1P19838 RNU6-603P-201ENST00000411403 107 ntBASIC5.27□□□□□ -1.57
NFKB1P19838 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.27□□□□□ -1.57
NFKB1P19838 AC091180.1-201ENST00000462104 372 ntBASIC5.27□□□□□ -1.57
NFKB1P19838 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC5.27□□□□□ -1.57
NFKB1P19838 AC069113.1-201ENST00000517763 267 ntBASIC5.27□□□□□ -1.57
NFKB1P19838 IGKV2D-36-201ENST00000518643 226 ntBASIC5.27□□□□□ -1.57
NFKB1P19838 AC012339.2-201ENST00000523996 453 ntBASIC5.27□□□□□ -1.57
NFKB1P19838 AC104576.1-201ENST00000524225 88 ntBASIC5.27□□□□□ -1.57
NFKB1P19838 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.27□□□□□ -1.57
NFKB1P19838 OR10G5P-201ENST00000532733 358 ntBASIC5.27□□□□□ -1.57
NFKB1P19838 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.27□□□□□ -1.57
NFKB1P19838 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC5.27□□□□□ -1.57
NFKB1P19838 VN1R91P-201ENST00000594377 169 ntBASIC5.27□□□□□ -1.57
NFKB1P19838 AC010201.1-201ENST00000605051 540 ntBASIC5.27□□□□□ -1.57
NFKB1P19838 AL034351.1-201ENST00000605288 668 ntBASIC5.27□□□□□ -1.57
NFKB1P19838 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.27□□□□□ -1.57
NFKB1P19838 MIR6130-201ENST00000619419 109 ntBASIC5.27□□□□□ -1.57
NFKB1P19838 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.27□□□□□ -1.57
NFKB1P19838 AC130454.1-201ENST00000622948 401 ntBASIC5.27□□□□□ -1.57
NFKB1P19838 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.27□□□□□ -1.57
NFKB1P19838 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC5.27□□□□□ -1.57
NFKB1P19838 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NFKB1P19838 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.27□□□□□ -1.57
NFKB1P19838 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
NFKB1P19838 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC5.27□□□□□ -1.57
NFKB1P19838 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NFKB1P19838 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
NFKB1P19838 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
NFKB1P19838 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NFKB1P19838 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
NFKB1P19838 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NFKB1P19838 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NFKB1P19838 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
NFKB1P19838 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.26□□□□□ -1.57
NFKB1P19838 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.26□□□□□ -1.57
NFKB1P19838 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.26□□□□□ -1.57
NFKB1P19838 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.26□□□□□ -1.57
NFKB1P19838 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.26□□□□□ -1.57
NFKB1P19838 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NFKB1P19838 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
NFKB1P19838 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NFKB1P19838 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NFKB1P19838 Y_RNA.20-201ENST00000362479 113 ntBASIC5.26□□□□□ -1.57
NFKB1P19838 Y_RNA.180-201ENST00000363867 113 ntBASIC5.26□□□□□ -1.57
NFKB1P19838 RNY3P11-201ENST00000364153 102 ntBASIC5.26□□□□□ -1.57
NFKB1P19838 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 194.5 ms