Protein–RNA interactions for Protein: O43474

KLF4, Krueppel-like factor 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4O43474 RNA5SP468-201ENST00000516782 93 ntBASIC4.63□□□□□ -1.67
KLF4O43474 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.63□□□□□ -1.67
KLF4O43474 SCOCP1-201ENST00000554676 349 ntBASIC4.63□□□□□ -1.67
KLF4O43474 NDUFB4P11-201ENST00000560510 395 ntBASIC4.63□□□□□ -1.67
KLF4O43474 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.63□□□□□ -1.67
KLF4O43474 MIR4700-201ENST00000578311 74 ntBASIC4.63□□□□□ -1.67
KLF4O43474 AC021646.1-201ENST00000605469 484 ntBASIC4.63□□□□□ -1.67
KLF4O43474 AC090574.1-201ENST00000623186 233 ntBASIC4.63□□□□□ -1.67
KLF4O43474 MTND1P37-201ENST00000636562 264 ntBASIC4.63□□□□□ -1.67
KLF4O43474 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
KLF4O43474 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
KLF4O43474 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
KLF4O43474 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
KLF4O43474 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
KLF4O43474 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
KLF4O43474 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
KLF4O43474 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.62□□□□□ -1.67
KLF4O43474 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
KLF4O43474 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.62□□□□□ -1.67
KLF4O43474 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
KLF4O43474 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
KLF4O43474 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
KLF4O43474 AL445487.1-201ENST00000415694 1580 ntBASIC4.62□□□□□ -1.67
KLF4O43474 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
KLF4O43474 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.62□□□□□ -1.67
KLF4O43474 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
KLF4O43474 RNU6-512P-201ENST00000364438 103 ntBASIC4.62□□□□□ -1.67
KLF4O43474 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
KLF4O43474 RNU6-741P-201ENST00000383889 107 ntBASIC4.62□□□□□ -1.67
KLF4O43474 Y_RNA.431-201ENST00000384086 102 ntBASIC4.62□□□□□ -1.67
KLF4O43474 RNU6-45P-201ENST00000384471 107 ntBASIC4.62□□□□□ -1.67
KLF4O43474 SNORA16.2-201ENST00000390991 127 ntBASIC4.62□□□□□ -1.67
KLF4O43474 RNA5SP129-201ENST00000410276 118 ntBASIC4.62□□□□□ -1.67
KLF4O43474 CRYBB2P1-203ENST00000415709 538 ntBASIC4.62□□□□□ -1.67
KLF4O43474 RPLP0P7-201ENST00000416050 667 ntBASIC4.62□□□□□ -1.67
KLF4O43474 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.62□□□□□ -1.67
KLF4O43474 AC093162.1-201ENST00000419682 124 ntBASIC4.62□□□□□ -1.67
KLF4O43474 AL139396.1-201ENST00000421137 167 ntBASIC4.62□□□□□ -1.67
KLF4O43474 RPL23AP69-201ENST00000431134 458 ntBASIC4.62□□□□□ -1.67
KLF4O43474 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC4.62□□□□□ -1.67
KLF4O43474 HSPD1P21-201ENST00000436541 245 ntBASIC4.62□□□□□ -1.67
KLF4O43474 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.62□□□□□ -1.67
KLF4O43474 Z92846.1-201ENST00000456203 268 ntBASIC4.62□□□□□ -1.67
KLF4O43474 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.62□□□□□ -1.67
KLF4O43474 RPL21P41-201ENST00000459863 264 ntBASIC4.62□□□□□ -1.67
KLF4O43474 RPS17P2-201ENST00000461663 408 ntBASIC4.62□□□□□ -1.67
KLF4O43474 AC009127.1-201ENST00000467090 155 ntBASIC4.62□□□□□ -1.67
KLF4O43474 DYNLL1P5-201ENST00000467158 270 ntBASIC4.62□□□□□ -1.67
KLF4O43474 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.62□□□□□ -1.67
KLF4O43474 RPL21P93-201ENST00000480465 489 ntBASIC4.62□□□□□ -1.67
KLF4O43474 RPS23P1-201ENST00000491662 432 ntBASIC4.62□□□□□ -1.67
KLF4O43474 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.62□□□□□ -1.67
KLF4O43474 HMGB3P16-201ENST00000508037 287 ntBASIC4.62□□□□□ -1.67
KLF4O43474 RNU2-69P-201ENST00000516061 100 ntBASIC4.62□□□□□ -1.67
KLF4O43474 CYCSP27-201ENST00000527643 293 ntBASIC4.62□□□□□ -1.67
KLF4O43474 OR5D17P-201ENST00000531492 978 ntBASIC4.62□□□□□ -1.67
KLF4O43474 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
KLF4O43474 AP000889.2-201ENST00000532684 490 ntBASIC4.62□□□□□ -1.67
KLF4O43474 AC135001.1-201ENST00000544546 283 ntBASIC4.62□□□□□ -1.67
KLF4O43474 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.62□□□□□ -1.67
KLF4O43474 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.62□□□□□ -1.67
KLF4O43474 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
KLF4O43474 MIR4472-2-201ENST00000582069 67 ntBASIC4.62□□□□□ -1.67
KLF4O43474 RN7SL435P-201ENST00000584418 282 ntBASIC4.62□□□□□ -1.67
KLF4O43474 MIR548AC-201ENST00000585049 88 ntBASIC4.62□□□□□ -1.67
KLF4O43474 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.62□□□□□ -1.67
KLF4O43474 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.62□□□□□ -1.67
KLF4O43474 AC098826.3-201ENST00000603823 466 ntBASIC4.62□□□□□ -1.67
KLF4O43474 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.62□□□□□ -1.67
KLF4O43474 CTHRC1P1-201ENST00000605383 469 ntBASIC4.62□□□□□ -1.67
KLF4O43474 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.62□□□□□ -1.67
KLF4O43474 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.62□□□□□ -1.67
KLF4O43474 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC4.62□□□□□ -1.67
KLF4O43474 AC007546.1-201ENST00000619452 559 ntBASIC4.62□□□□□ -1.67
KLF4O43474 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.62□□□□□ -1.67
KLF4O43474 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.62□□□□□ -1.67
KLF4O43474 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
KLF4O43474 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
KLF4O43474 PCAT14-202ENST00000627127 3935 ntBASIC4.62□□□□□ -1.67
KLF4O43474 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
KLF4O43474 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.62□□□□□ -1.67
KLF4O43474 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
KLF4O43474 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
KLF4O43474 HSPA8P4-201ENST00000511877 1920 ntBASIC4.62□□□□□ -1.67
KLF4O43474 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
KLF4O43474 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
KLF4O43474 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.62□□□□□ -1.67
KLF4O43474 AL133412.1-201ENST00000380194 2992 ntBASIC4.62□□□□□ -1.67
KLF4O43474 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
KLF4O43474 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
KLF4O43474 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.61□□□□□ -1.67
KLF4O43474 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
KLF4O43474 MARK2P15-201ENST00000432204 2186 ntBASIC4.61□□□□□ -1.67
KLF4O43474 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.61□□□□□ -1.67
KLF4O43474 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
KLF4O43474 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
KLF4O43474 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
KLF4O43474 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.61□□□□□ -1.67
KLF4O43474 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
KLF4O43474 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 178.6 ms