Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHB9Q9Y5E1 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHB9Q9Y5E1 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
PCDHB9Q9Y5E1 AL672167.1-205ENST00000641112 3080 ntBASIC5.78□□□□□ -1.48
PCDHB9Q9Y5E1 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
PCDHB9Q9Y5E1 AP001284.1-201ENST00000528393 2118 ntBASIC5.78□□□□□ -1.48
PCDHB9Q9Y5E1 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHB9Q9Y5E1 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
PCDHB9Q9Y5E1 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHB9Q9Y5E1 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
PCDHB9Q9Y5E1 SNORA64.1-201ENST00000362600 132 ntBASIC5.78□□□□□ -1.48
PCDHB9Q9Y5E1 MIR578-201ENST00000384828 96 ntBASIC5.78□□□□□ -1.48
PCDHB9Q9Y5E1 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
PCDHB9Q9Y5E1 RNA5SP91-201ENST00000390902 119 ntBASIC5.78□□□□□ -1.48
PCDHB9Q9Y5E1 RN7SKP216-201ENST00000411050 312 ntBASIC5.78□□□□□ -1.48
PCDHB9Q9Y5E1 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.78□□□□□ -1.48
PCDHB9Q9Y5E1 RPL37P6-202ENST00000464216 403 ntBASIC5.78□□□□□ -1.48
PCDHB9Q9Y5E1 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHB9Q9Y5E1 RN7SL570P-201ENST00000484405 292 ntBASIC5.78□□□□□ -1.48
PCDHB9Q9Y5E1 AC093270.2-201ENST00000486157 792 ntBASIC5.78□□□□□ -1.48
PCDHB9Q9Y5E1 MRPS33P2-201ENST00000507850 322 ntBASIC5.78□□□□□ -1.48
PCDHB9Q9Y5E1 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHB9Q9Y5E1 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.78□□□□□ -1.48
PCDHB9Q9Y5E1 RNU6-397P-201ENST00000516226 104 ntBASIC5.78□□□□□ -1.48
PCDHB9Q9Y5E1 Y_RNA.700-201ENST00000516806 100 ntBASIC5.78□□□□□ -1.48
PCDHB9Q9Y5E1 RNU6-182P-201ENST00000516970 105 ntBASIC5.78□□□□□ -1.48
PCDHB9Q9Y5E1 AC144568.1-201ENST00000520139 137 ntBASIC5.78□□□□□ -1.48
PCDHB9Q9Y5E1 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.78□□□□□ -1.48
PCDHB9Q9Y5E1 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
PCDHB9Q9Y5E1 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDHB9Q9Y5E1 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDHB9Q9Y5E1 AC068790.4-201ENST00000602474 263 ntBASIC5.78□□□□□ -1.48
PCDHB9Q9Y5E1 AC012669.1-201ENST00000603209 283 ntBASIC5.78□□□□□ -1.48
PCDHB9Q9Y5E1 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC5.78□□□□□ -1.48
PCDHB9Q9Y5E1 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.78□□□□□ -1.48
PCDHB9Q9Y5E1 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
PCDHB9Q9Y5E1 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHB9Q9Y5E1 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.78□□□□□ -1.48
PCDHB9Q9Y5E1 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHB9Q9Y5E1 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHB9Q9Y5E1 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.77□□□□□ -1.49
PCDHB9Q9Y5E1 AC015799.1-201ENST00000622996 3122 ntBASIC5.77□□□□□ -1.49
PCDHB9Q9Y5E1 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHB9Q9Y5E1 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
PCDHB9Q9Y5E1 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHB9Q9Y5E1 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHB9Q9Y5E1 Y_RNA.20-201ENST00000362479 113 ntBASIC5.77□□□□□ -1.49
PCDHB9Q9Y5E1 RNU6-171P-201ENST00000384354 107 ntBASIC5.77□□□□□ -1.49
PCDHB9Q9Y5E1 RNU6-146P-201ENST00000384602 108 ntBASIC5.77□□□□□ -1.49
PCDHB9Q9Y5E1 MIR223-201ENST00000385204 110 ntBASIC5.77□□□□□ -1.49
PCDHB9Q9Y5E1 AL109941.1-201ENST00000401925 229 ntBASIC5.77□□□□□ -1.49
PCDHB9Q9Y5E1 RNU6-607P-201ENST00000411283 108 ntBASIC5.77□□□□□ -1.49
PCDHB9Q9Y5E1 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.77□□□□□ -1.49
PCDHB9Q9Y5E1 RPS15AP6-201ENST00000420703 385 ntBASIC5.77□□□□□ -1.49
PCDHB9Q9Y5E1 PIGPP3-201ENST00000425307 415 ntBASIC5.77□□□□□ -1.49
PCDHB9Q9Y5E1 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.77□□□□□ -1.49
PCDHB9Q9Y5E1 AL772161.1-201ENST00000439130 476 ntBASIC5.77□□□□□ -1.49
PCDHB9Q9Y5E1 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.77□□□□□ -1.49
PCDHB9Q9Y5E1 PRDX3P3-201ENST00000447765 522 ntBASIC5.77□□□□□ -1.49
PCDHB9Q9Y5E1 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.77□□□□□ -1.49
PCDHB9Q9Y5E1 RPS23P2-201ENST00000463671 415 ntBASIC5.77□□□□□ -1.49
PCDHB9Q9Y5E1 SNRPCP3-201ENST00000474888 476 ntBASIC5.77□□□□□ -1.49
PCDHB9Q9Y5E1 TRBVB-201ENST00000477100 408 ntBASIC5.77□□□□□ -1.49
PCDHB9Q9Y5E1 DUTP1-201ENST00000493631 470 ntBASIC5.77□□□□□ -1.49
PCDHB9Q9Y5E1 NDUFB4P9-201ENST00000511646 388 ntBASIC5.77□□□□□ -1.49
PCDHB9Q9Y5E1 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.77□□□□□ -1.49
PCDHB9Q9Y5E1 RNU6-941P-201ENST00000516346 108 ntBASIC5.77□□□□□ -1.49
PCDHB9Q9Y5E1 RNU6-914P-201ENST00000516749 109 ntBASIC5.77□□□□□ -1.49
PCDHB9Q9Y5E1 RNU6-570P-201ENST00000517051 105 ntBASIC5.77□□□□□ -1.49
PCDHB9Q9Y5E1 AP003733.2-201ENST00000529409 171 ntBASIC5.77□□□□□ -1.49
PCDHB9Q9Y5E1 AC022080.3-201ENST00000544433 482 ntBASIC5.77□□□□□ -1.49
PCDHB9Q9Y5E1 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.77□□□□□ -1.49
PCDHB9Q9Y5E1 AC127381.1-201ENST00000555979 939 ntBASIC5.77□□□□□ -1.49
PCDHB9Q9Y5E1 AL390726.5-202ENST00000564800 256 ntBASIC5.77□□□□□ -1.49
PCDHB9Q9Y5E1 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.77□□□□□ -1.49
PCDHB9Q9Y5E1 AC012433.1-201ENST00000588916 398 ntBASIC5.77□□□□□ -1.49
PCDHB9Q9Y5E1 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC5.77□□□□□ -1.49
PCDHB9Q9Y5E1 AL390123.1-201ENST00000603216 237 ntBASIC5.77□□□□□ -1.49
PCDHB9Q9Y5E1 AC064801.1-201ENST00000612025 407 ntBASIC5.77□□□□□ -1.49
PCDHB9Q9Y5E1 AC090607.5-201ENST00000615692 224 ntBASIC5.77□□□□□ -1.49
PCDHB9Q9Y5E1 CU639417.4-201ENST00000623928 207 ntBASIC5.77□□□□□ -1.49
PCDHB9Q9Y5E1 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.77□□□□□ -1.49
PCDHB9Q9Y5E1 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
PCDHB9Q9Y5E1 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHB9Q9Y5E1 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHB9Q9Y5E1 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHB9Q9Y5E1 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
PCDHB9Q9Y5E1 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.77□□□□□ -1.49
PCDHB9Q9Y5E1 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHB9Q9Y5E1 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PCDHB9Q9Y5E1 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
PCDHB9Q9Y5E1 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.76□□□□□ -1.49
PCDHB9Q9Y5E1 THAP12P5-201ENST00000405864 2275 ntBASIC5.76□□□□□ -1.49
PCDHB9Q9Y5E1 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
PCDHB9Q9Y5E1 RNU4-44P-201ENST00000363050 141 ntBASIC5.76□□□□□ -1.49
PCDHB9Q9Y5E1 RNU6-263P-201ENST00000363811 107 ntBASIC5.76□□□□□ -1.49
PCDHB9Q9Y5E1 MIR585-201ENST00000384887 94 ntBASIC5.76□□□□□ -1.49
PCDHB9Q9Y5E1 MIR130A-201ENST00000385274 89 ntBASIC5.76□□□□□ -1.49
PCDHB9Q9Y5E1 RNU2-43P-201ENST00000410306 190 ntBASIC5.76□□□□□ -1.49
PCDHB9Q9Y5E1 RNU6-325P-201ENST00000411132 105 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 194.3 ms