Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 APOOP1-201ENST00000604695 592 ntBASIC4.95□□□□□ -1.62
EPHB3P54753 AL391813.2-201ENST00000609113 322 ntBASIC4.95□□□□□ -1.62
EPHB3P54753 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
EPHB3P54753 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.95□□□□□ -1.62
EPHB3P54753 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
EPHB3P54753 MIR6758-201ENST00000620653 63 ntBASIC4.95□□□□□ -1.62
EPHB3P54753 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.95□□□□□ -1.62
EPHB3P54753 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
EPHB3P54753 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
EPHB3P54753 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.95□□□□□ -1.62
EPHB3P54753 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
EPHB3P54753 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.95□□□□□ -1.62
EPHB3P54753 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.95□□□□□ -1.62
EPHB3P54753 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
EPHB3P54753 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
EPHB3P54753 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
EPHB3P54753 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
EPHB3P54753 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
EPHB3P54753 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
EPHB3P54753 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
EPHB3P54753 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.94□□□□□ -1.62
EPHB3P54753 KPNA2P2-201ENST00000419546 1489 ntBASIC4.94□□□□□ -1.62
EPHB3P54753 MTND5P33-201ENST00000571250 1450 ntBASIC4.94□□□□□ -1.62
EPHB3P54753 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
EPHB3P54753 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
EPHB3P54753 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
EPHB3P54753 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
EPHB3P54753 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.94□□□□□ -1.62
EPHB3P54753 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
EPHB3P54753 OR56B2P-202ENST00000641377 2453 ntBASIC4.94□□□□□ -1.62
EPHB3P54753 AC126755.2-208ENST00000327792 462 ntBASIC4.94□□□□□ -1.62
EPHB3P54753 AC138969.1-213ENST00000331436 462 ntBASIC4.94□□□□□ -1.62
EPHB3P54753 RPL32P3-201ENST00000359025 275 ntBASIC4.94□□□□□ -1.62
EPHB3P54753 Y_RNA.301-201ENST00000364990 103 ntBASIC4.94□□□□□ -1.62
EPHB3P54753 Y_RNA.339-201ENST00000365325 102 ntBASIC4.94□□□□□ -1.62
EPHB3P54753 RNU4-20P-201ENST00000365601 151 ntBASIC4.94□□□□□ -1.62
EPHB3P54753 AC117470.1-201ENST00000381974 330 ntBASIC4.94□□□□□ -1.62
EPHB3P54753 RNU6-505P-201ENST00000384427 107 ntBASIC4.94□□□□□ -1.62
EPHB3P54753 AL583835.1-201ENST00000399570 407 ntBASIC4.94□□□□□ -1.62
EPHB3P54753 RNU4-26P-201ENST00000410270 107 ntBASIC4.94□□□□□ -1.62
EPHB3P54753 RNU4-14P-201ENST00000410858 122 ntBASIC4.94□□□□□ -1.62
EPHB3P54753 Y_RNA.618-201ENST00000410949 107 ntBASIC4.94□□□□□ -1.62
EPHB3P54753 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
EPHB3P54753 AC009302.1-201ENST00000417147 390 ntBASIC4.94□□□□□ -1.62
EPHB3P54753 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC4.94□□□□□ -1.62
EPHB3P54753 USP9YP16-201ENST00000430287 407 ntBASIC4.94□□□□□ -1.62
EPHB3P54753 AC010881.1-201ENST00000433830 235 ntBASIC4.94□□□□□ -1.62
EPHB3P54753 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.94□□□□□ -1.62
EPHB3P54753 HMGN3P1-201ENST00000453847 193 ntBASIC4.94□□□□□ -1.62
EPHB3P54753 USP9YP23-201ENST00000455085 407 ntBASIC4.94□□□□□ -1.62
EPHB3P54753 RPS20P32-201ENST00000456044 356 ntBASIC4.94□□□□□ -1.62
EPHB3P54753 AC245028.2-201ENST00000458673 253 ntBASIC4.94□□□□□ -1.62
EPHB3P54753 RNU6-1208P-201ENST00000459588 107 ntBASIC4.94□□□□□ -1.62
EPHB3P54753 RNU6-488P-201ENST00000515918 99 ntBASIC4.94□□□□□ -1.62
EPHB3P54753 RNU4-29P-201ENST00000515943 174 ntBASIC4.94□□□□□ -1.62
EPHB3P54753 RNU6-347P-201ENST00000516658 105 ntBASIC4.94□□□□□ -1.62
EPHB3P54753 RNA5SP230-201ENST00000517039 122 ntBASIC4.94□□□□□ -1.62
EPHB3P54753 RNU6-988P-201ENST00000519081 107 ntBASIC4.94□□□□□ -1.62
EPHB3P54753 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.94□□□□□ -1.62
EPHB3P54753 AP003122.3-201ENST00000526316 255 ntBASIC4.94□□□□□ -1.62
EPHB3P54753 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.94□□□□□ -1.62
EPHB3P54753 AL356432.3-201ENST00000568952 465 ntBASIC4.94□□□□□ -1.62
EPHB3P54753 SNORD39.3-201ENST00000584451 71 ntBASIC4.94□□□□□ -1.62
EPHB3P54753 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.94□□□□□ -1.62
EPHB3P54753 AL356218.2-201ENST00000605264 187 ntBASIC4.94□□□□□ -1.62
EPHB3P54753 AP000654.2-201ENST00000605633 586 ntBASIC4.94□□□□□ -1.62
EPHB3P54753 AC092807.2-201ENST00000609367 243 ntBASIC4.94□□□□□ -1.62
EPHB3P54753 AC130324.3-201ENST00000614165 542 ntBASIC4.94□□□□□ -1.62
EPHB3P54753 uc_338.15-201ENST00000615470 191 ntBASIC4.94□□□□□ -1.62
EPHB3P54753 U3.53-201ENST00000628922 216 ntBASIC4.94□□□□□ -1.62
EPHB3P54753 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
EPHB3P54753 U6.101-201ENST00000637707 76 ntBASIC4.94□□□□□ -1.62
EPHB3P54753 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
EPHB3P54753 AC139713.2-214ENST00000642059 1811 ntBASIC4.94□□□□□ -1.62
EPHB3P54753 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
EPHB3P54753 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
EPHB3P54753 AC022031.1-201ENST00000585985 2593 ntBASIC4.94□□□□□ -1.62
EPHB3P54753 AC108751.5-201ENST00000492880 1336 ntBASIC4.94□□□□□ -1.62
EPHB3P54753 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
EPHB3P54753 AC104260.2-201ENST00000623551 3497 ntBASIC4.93□□□□□ -1.62
EPHB3P54753 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
EPHB3P54753 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
EPHB3P54753 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
EPHB3P54753 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.93□□□□□ -1.62
EPHB3P54753 AC092125.1-201ENST00000562568 1995 ntBASIC4.93□□□□□ -1.62
EPHB3P54753 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
EPHB3P54753 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
EPHB3P54753 Y_RNA.187-201ENST00000363918 113 ntBASIC4.93□□□□□ -1.62
EPHB3P54753 AL590762.2-201ENST00000395798 571 ntBASIC4.93□□□□□ -1.62
EPHB3P54753 RPL7P60-201ENST00000397636 735 ntBASIC4.93□□□□□ -1.62
EPHB3P54753 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC4.93□□□□□ -1.62
EPHB3P54753 SOCS5P3-201ENST00000425115 1576 ntBASIC4.93□□□□□ -1.62
EPHB3P54753 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.93□□□□□ -1.62
EPHB3P54753 CBX1P4-201ENST00000439415 457 ntBASIC4.93□□□□□ -1.62
EPHB3P54753 RPL32P28-201ENST00000443577 397 ntBASIC4.93□□□□□ -1.62
EPHB3P54753 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.93□□□□□ -1.62
EPHB3P54753 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.93□□□□□ -1.62
EPHB3P54753 AP1S2P1-201ENST00000457344 379 ntBASIC4.93□□□□□ -1.62
EPHB3P54753 RPS4XP10-201ENST00000465034 731 ntBASIC4.93□□□□□ -1.62
EPHB3P54753 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 163.3 ms