Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 ZNF137P-201ENST00000456718 1920 ntBASIC4.96□□□□□ -1.62
EPHB3P54753 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.96□□□□□ -1.62
EPHB3P54753 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
EPHB3P54753 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
EPHB3P54753 AC067945.1-201ENST00000342609 618 ntBASIC4.96□□□□□ -1.62
EPHB3P54753 Y_RNA.28-201ENST00000362554 111 ntBASIC4.96□□□□□ -1.62
EPHB3P54753 RNY1P12-201ENST00000364251 105 ntBASIC4.96□□□□□ -1.62
EPHB3P54753 RNU6-343P-201ENST00000364709 104 ntBASIC4.96□□□□□ -1.62
EPHB3P54753 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.96□□□□□ -1.62
EPHB3P54753 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
EPHB3P54753 MIR129-1-201ENST00000384972 72 ntBASIC4.96□□□□□ -1.62
EPHB3P54753 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.96□□□□□ -1.62
EPHB3P54753 AC099336.2-201ENST00000422457 254 ntBASIC4.96□□□□□ -1.62
EPHB3P54753 AC005517.2-201ENST00000424673 553 ntBASIC4.96□□□□□ -1.62
EPHB3P54753 AC007283.2-201ENST00000424739 197 ntBASIC4.96□□□□□ -1.62
EPHB3P54753 AC092017.2-201ENST00000427600 362 ntBASIC4.96□□□□□ -1.62
EPHB3P54753 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.96□□□□□ -1.62
EPHB3P54753 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.96□□□□□ -1.62
EPHB3P54753 AC091390.1-201ENST00000433904 331 ntBASIC4.96□□□□□ -1.62
EPHB3P54753 RPL35AP21-201ENST00000437667 333 ntBASIC4.96□□□□□ -1.62
EPHB3P54753 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.96□□□□□ -1.62
EPHB3P54753 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.96□□□□□ -1.62
EPHB3P54753 MTND3P16-201ENST00000452205 344 ntBASIC4.96□□□□□ -1.62
EPHB3P54753 AC099560.2-201ENST00000457554 255 ntBASIC4.96□□□□□ -1.62
EPHB3P54753 GMFBP1-201ENST00000467831 427 ntBASIC4.96□□□□□ -1.62
EPHB3P54753 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.96□□□□□ -1.62
EPHB3P54753 AP001025.2-201ENST00000490908 477 ntBASIC4.96□□□□□ -1.62
EPHB3P54753 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.96□□□□□ -1.62
EPHB3P54753 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.96□□□□□ -1.62
EPHB3P54753 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.96□□□□□ -1.62
EPHB3P54753 MTCO2P24-201ENST00000515611 426 ntBASIC4.96□□□□□ -1.62
EPHB3P54753 RNU6-202P-201ENST00000515998 96 ntBASIC4.96□□□□□ -1.62
EPHB3P54753 Y_RNA.665-201ENST00000516177 98 ntBASIC4.96□□□□□ -1.62
EPHB3P54753 RNU6-410P-201ENST00000517006 107 ntBASIC4.96□□□□□ -1.62
EPHB3P54753 COPS8P3-201ENST00000526024 482 ntBASIC4.96□□□□□ -1.62
EPHB3P54753 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.96□□□□□ -1.62
EPHB3P54753 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.96□□□□□ -1.62
EPHB3P54753 AL359219.2-201ENST00000555184 348 ntBASIC4.96□□□□□ -1.62
EPHB3P54753 MIR4277-201ENST00000578298 84 ntBASIC4.96□□□□□ -1.62
EPHB3P54753 MAGOH2P-202ENST00000584384 429 ntBASIC4.96□□□□□ -1.62
EPHB3P54753 AC017100.2-201ENST00000584628 355 ntBASIC4.96□□□□□ -1.62
EPHB3P54753 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.96□□□□□ -1.62
EPHB3P54753 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.96□□□□□ -1.62
EPHB3P54753 uc_338.22-201ENST00000622722 187 ntBASIC4.96□□□□□ -1.62
EPHB3P54753 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.96□□□□□ -1.62
EPHB3P54753 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
EPHB3P54753 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
EPHB3P54753 AL136164.3-201ENST00000624429 3978 ntBASIC4.96□□□□□ -1.62
EPHB3P54753 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
EPHB3P54753 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.96□□□□□ -1.62
EPHB3P54753 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
EPHB3P54753 SAMMSON-213ENST00000641336 1521 ntBASIC4.96□□□□□ -1.62
EPHB3P54753 AC107027.3-201ENST00000565095 3473 ntBASIC4.96□□□□□ -1.62
EPHB3P54753 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
EPHB3P54753 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
EPHB3P54753 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.96□□□□□ -1.62
EPHB3P54753 ASNSP3-201ENST00000451989 1306 ntBASIC4.96□□□□□ -1.62
EPHB3P54753 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
EPHB3P54753 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.96□□□□□ -1.62
EPHB3P54753 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.95□□□□□ -1.62
EPHB3P54753 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
EPHB3P54753 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
EPHB3P54753 AC004817.4-201ENST00000602396 3625 ntBASIC4.95□□□□□ -1.62
EPHB3P54753 AC006971.1-201ENST00000407916 4486 ntBASIC4.95□□□□□ -1.62
EPHB3P54753 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
EPHB3P54753 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.95□□□□□ -1.62
EPHB3P54753 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.95□□□□□ -1.62
EPHB3P54753 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
EPHB3P54753 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
EPHB3P54753 RNU6-984P-201ENST00000363236 109 ntBASIC4.95□□□□□ -1.62
EPHB3P54753 Y_RNA.193-201ENST00000363979 102 ntBASIC4.95□□□□□ -1.62
EPHB3P54753 MTCYBP4-201ENST00000401524 249 ntBASIC4.95□□□□□ -1.62
EPHB3P54753 MIR548F4-201ENST00000408515 105 ntBASIC4.95□□□□□ -1.62
EPHB3P54753 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.95□□□□□ -1.62
EPHB3P54753 Z98949.2-201ENST00000440996 144 ntBASIC4.95□□□□□ -1.62
EPHB3P54753 AL049734.2-201ENST00000441066 616 ntBASIC4.95□□□□□ -1.62
EPHB3P54753 AL137792.2-201ENST00000443484 235 ntBASIC4.95□□□□□ -1.62
EPHB3P54753 RPL21P133-201ENST00000443666 476 ntBASIC4.95□□□□□ -1.62
EPHB3P54753 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.95□□□□□ -1.62
EPHB3P54753 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.95□□□□□ -1.62
EPHB3P54753 AL356981.1-201ENST00000454879 684 ntBASIC4.95□□□□□ -1.62
EPHB3P54753 RPS23P7-201ENST00000466210 444 ntBASIC4.95□□□□□ -1.62
EPHB3P54753 RN7SL809P-201ENST00000482040 297 ntBASIC4.95□□□□□ -1.62
EPHB3P54753 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.95□□□□□ -1.62
EPHB3P54753 FAM206BP-201ENST00000510179 541 ntBASIC4.95□□□□□ -1.62
EPHB3P54753 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.95□□□□□ -1.62
EPHB3P54753 PTP4A1P4-201ENST00000512479 322 ntBASIC4.95□□□□□ -1.62
EPHB3P54753 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.95□□□□□ -1.62
EPHB3P54753 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.95□□□□□ -1.62
EPHB3P54753 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.95□□□□□ -1.62
EPHB3P54753 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.95□□□□□ -1.62
EPHB3P54753 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.95□□□□□ -1.62
EPHB3P54753 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.95□□□□□ -1.62
EPHB3P54753 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.95□□□□□ -1.62
EPHB3P54753 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.95□□□□□ -1.62
EPHB3P54753 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.95□□□□□ -1.62
EPHB3P54753 MIR4660-201ENST00000583549 74 ntBASIC4.95□□□□□ -1.62
EPHB3P54753 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.95□□□□□ -1.62
EPHB3P54753 AC098848.2-201ENST00000588023 330 ntBASIC4.95□□□□□ -1.62
EPHB3P54753 BBIP1P1-201ENST00000602999 279 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 179.9 ms