Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 SNORA14.1-201ENST00000516113 141 ntBASIC5.57□□□□□ -1.52
NFKB1P19838 RNU2-53P-201ENST00000516257 147 ntBASIC5.57□□□□□ -1.52
NFKB1P19838 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.57□□□□□ -1.52
NFKB1P19838 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.57□□□□□ -1.52
NFKB1P19838 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.57□□□□□ -1.52
NFKB1P19838 MIR4505-201ENST00000582238 73 ntBASIC5.57□□□□□ -1.52
NFKB1P19838 AC008521.1-201ENST00000587471 187 ntBASIC5.57□□□□□ -1.52
NFKB1P19838 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.57□□□□□ -1.52
NFKB1P19838 AL021879.1-201ENST00000611756 288 ntBASIC5.57□□□□□ -1.52
NFKB1P19838 MIR8062-201ENST00000621515 85 ntBASIC5.57□□□□□ -1.52
NFKB1P19838 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
NFKB1P19838 AC073869.8-201ENST00000641806 335 ntBASIC5.57□□□□□ -1.52
NFKB1P19838 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NFKB1P19838 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NFKB1P19838 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NFKB1P19838 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
NFKB1P19838 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
NFKB1P19838 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.57□□□□□ -1.52
NFKB1P19838 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NFKB1P19838 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NFKB1P19838 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
NFKB1P19838 AC009313.2-201ENST00000417893 1941 ntBASIC5.56□□□□□ -1.52
NFKB1P19838 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.56□□□□□ -1.52
NFKB1P19838 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
NFKB1P19838 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.56□□□□□ -1.52
NFKB1P19838 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
NFKB1P19838 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.56□□□□□ -1.52
NFKB1P19838 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
NFKB1P19838 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
NFKB1P19838 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NFKB1P19838 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NFKB1P19838 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.56□□□□□ -1.52
NFKB1P19838 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NFKB1P19838 MIR133A2-201ENST00000347538 102 ntBASIC5.56□□□□□ -1.52
NFKB1P19838 Y_RNA.152-201ENST00000363578 100 ntBASIC5.56□□□□□ -1.52
NFKB1P19838 RNU6-1078P-201ENST00000364522 103 ntBASIC5.56□□□□□ -1.52
NFKB1P19838 SNORA16A-201ENST00000384342 137 ntBASIC5.56□□□□□ -1.52
NFKB1P19838 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC5.56□□□□□ -1.52
NFKB1P19838 RPL23AP69-201ENST00000431134 458 ntBASIC5.56□□□□□ -1.52
NFKB1P19838 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.56□□□□□ -1.52
NFKB1P19838 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.56□□□□□ -1.52
NFKB1P19838 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC5.56□□□□□ -1.52
NFKB1P19838 RBBP4P6-201ENST00000508098 202 ntBASIC5.56□□□□□ -1.52
NFKB1P19838 AC012400.1-201ENST00000518452 381 ntBASIC5.56□□□□□ -1.52
NFKB1P19838 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC5.56□□□□□ -1.52
NFKB1P19838 AC092470.1-201ENST00000546187 132 ntBASIC5.56□□□□□ -1.52
NFKB1P19838 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.56□□□□□ -1.52
NFKB1P19838 AC009570.1-201ENST00000609599 745 ntBASIC5.56□□□□□ -1.52
NFKB1P19838 MIR6861-201ENST00000618657 64 ntBASIC5.56□□□□□ -1.52
NFKB1P19838 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NFKB1P19838 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NFKB1P19838 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NFKB1P19838 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NFKB1P19838 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.56□□□□□ -1.52
NFKB1P19838 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NFKB1P19838 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NFKB1P19838 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.56□□□□□ -1.52
NFKB1P19838 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NFKB1P19838 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NFKB1P19838 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NFKB1P19838 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
NFKB1P19838 AL353796.1-201ENST00000561542 3241 ntBASIC5.55□□□□□ -1.52
NFKB1P19838 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.55□□□□□ -1.52
NFKB1P19838 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
NFKB1P19838 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.55□□□□□ -1.52
NFKB1P19838 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NFKB1P19838 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.55□□□□□ -1.52
NFKB1P19838 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
NFKB1P19838 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NFKB1P19838 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NFKB1P19838 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.55□□□□□ -1.52
NFKB1P19838 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.55□□□□□ -1.52
NFKB1P19838 Y_RNA.288-201ENST00000364854 92 ntBASIC5.55□□□□□ -1.52
NFKB1P19838 RNU6-1062P-201ENST00000383908 107 ntBASIC5.55□□□□□ -1.52
NFKB1P19838 SNORA16.2-201ENST00000390991 127 ntBASIC5.55□□□□□ -1.52
NFKB1P19838 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.55□□□□□ -1.52
NFKB1P19838 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.55□□□□□ -1.52
NFKB1P19838 AC243428.1-201ENST00000421099 264 ntBASIC5.55□□□□□ -1.52
NFKB1P19838 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC5.55□□□□□ -1.52
NFKB1P19838 AC093106.2-201ENST00000428212 385 ntBASIC5.55□□□□□ -1.52
NFKB1P19838 AL161722.2-201ENST00000434731 981 ntBASIC5.55□□□□□ -1.52
NFKB1P19838 AC127537.2-201ENST00000439258 465 ntBASIC5.55□□□□□ -1.52
NFKB1P19838 HSFY6P-201ENST00000445573 403 ntBASIC5.55□□□□□ -1.52
NFKB1P19838 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.55□□□□□ -1.52
NFKB1P19838 AC005008.1-201ENST00000456151 612 ntBASIC5.55□□□□□ -1.52
NFKB1P19838 AC112492.4-201ENST00000456549 352 ntBASIC5.55□□□□□ -1.52
NFKB1P19838 SETP20-201ENST00000457046 852 ntBASIC5.55□□□□□ -1.52
NFKB1P19838 RNU7-167P-201ENST00000459160 62 ntBASIC5.55□□□□□ -1.52
NFKB1P19838 AC008571.1-201ENST00000467232 300 ntBASIC5.55□□□□□ -1.52
NFKB1P19838 AC068781.1-201ENST00000488231 618 ntBASIC5.55□□□□□ -1.52
NFKB1P19838 RPL23AP55-201ENST00000498163 452 ntBASIC5.55□□□□□ -1.52
NFKB1P19838 VN1R104P-201ENST00000505115 1009 ntBASIC5.55□□□□□ -1.52
NFKB1P19838 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5.55□□□□□ -1.52
NFKB1P19838 SCARNA16.2-201ENST00000516520 172 ntBASIC5.55□□□□□ -1.52
NFKB1P19838 RNU4-77P-201ENST00000516692 156 ntBASIC5.55□□□□□ -1.52
NFKB1P19838 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NFKB1P19838 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.55□□□□□ -1.52
NFKB1P19838 MIR4675-201ENST00000577898 77 ntBASIC5.55□□□□□ -1.52
NFKB1P19838 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC5.55□□□□□ -1.52
NFKB1P19838 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 191.8 ms