Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 RN7SKP276-201ENST00000516242 268 ntBASIC5.17□□□□□ -1.58
EPHB3P54753 Vault.3-201ENST00000516676 95 ntBASIC5.17□□□□□ -1.58
EPHB3P54753 Y_RNA.711-201ENST00000516993 102 ntBASIC5.17□□□□□ -1.58
EPHB3P54753 AC107953.1-201ENST00000522216 297 ntBASIC5.17□□□□□ -1.58
EPHB3P54753 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC5.17□□□□□ -1.58
EPHB3P54753 AC027369.5-201ENST00000533838 755 ntBASIC5.17□□□□□ -1.58
EPHB3P54753 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
EPHB3P54753 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.17□□□□□ -1.58
EPHB3P54753 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
EPHB3P54753 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.17□□□□□ -1.58
EPHB3P54753 AC008737.2-201ENST00000599446 118 ntBASIC5.17□□□□□ -1.58
EPHB3P54753 AC006006.1-201ENST00000603082 144 ntBASIC5.17□□□□□ -1.58
EPHB3P54753 AL022394.1-201ENST00000606979 292 ntBASIC5.17□□□□□ -1.58
EPHB3P54753 AC090948.1-201ENST00000607464 549 ntBASIC5.17□□□□□ -1.58
EPHB3P54753 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.17□□□□□ -1.58
EPHB3P54753 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC5.17□□□□□ -1.58
EPHB3P54753 AL132822.1-201ENST00000617063 513 ntBASIC5.17□□□□□ -1.58
EPHB3P54753 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.17□□□□□ -1.58
EPHB3P54753 AP000346.3-201ENST00000622821 210 ntBASIC5.17□□□□□ -1.58
EPHB3P54753 AL356585.4-201ENST00000623078 1229 ntBASIC5.17□□□□□ -1.58
EPHB3P54753 AL078596.1-201ENST00000624856 447 ntBASIC5.17□□□□□ -1.58
EPHB3P54753 AC005005.4-201ENST00000623789 16698 ntBASIC5.17□□□□□ -1.58
EPHB3P54753 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
EPHB3P54753 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
EPHB3P54753 AC093849.1-201ENST00000563631 2209 ntBASIC5.17□□□□□ -1.58
EPHB3P54753 ZNF652P1-201ENST00000442420 1309 ntBASIC5.17□□□□□ -1.58
EPHB3P54753 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
EPHB3P54753 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
EPHB3P54753 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
EPHB3P54753 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
EPHB3P54753 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
EPHB3P54753 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
EPHB3P54753 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
EPHB3P54753 AC015813.6-201ENST00000624409 5808 ntBASIC5.16□□□□□ -1.58
EPHB3P54753 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
EPHB3P54753 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
EPHB3P54753 RNU6-251P-201ENST00000363235 104 ntBASIC5.16□□□□□ -1.58
EPHB3P54753 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
EPHB3P54753 RNU6-43P-201ENST00000384302 107 ntBASIC5.16□□□□□ -1.58
EPHB3P54753 RNU6-225P-201ENST00000384613 103 ntBASIC5.16□□□□□ -1.58
EPHB3P54753 RNU6-1158P-201ENST00000391167 107 ntBASIC5.16□□□□□ -1.58
EPHB3P54753 AC068050.1-201ENST00000394891 380 ntBASIC5.16□□□□□ -1.58
EPHB3P54753 RPL7P25-201ENST00000404151 721 ntBASIC5.16□□□□□ -1.58
EPHB3P54753 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.16□□□□□ -1.58
EPHB3P54753 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.16□□□□□ -1.58
EPHB3P54753 AC073136.2-201ENST00000417282 849 ntBASIC5.16□□□□□ -1.58
EPHB3P54753 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.16□□□□□ -1.58
EPHB3P54753 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.16□□□□□ -1.58
EPHB3P54753 AL136380.1-201ENST00000447970 162 ntBASIC5.16□□□□□ -1.58
EPHB3P54753 AC010733.1-201ENST00000451515 401 ntBASIC5.16□□□□□ -1.58
EPHB3P54753 AL691482.1-201ENST00000453255 87 ntBASIC5.16□□□□□ -1.58
EPHB3P54753 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.16□□□□□ -1.58
EPHB3P54753 Y_RNA.631-201ENST00000459607 101 ntBASIC5.16□□□□□ -1.58
EPHB3P54753 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC5.16□□□□□ -1.58
EPHB3P54753 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.16□□□□□ -1.58
EPHB3P54753 AC021146.2-201ENST00000504736 556 ntBASIC5.16□□□□□ -1.58
EPHB3P54753 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC5.16□□□□□ -1.58
EPHB3P54753 PCBP2P3-201ENST00000509726 843 ntBASIC5.16□□□□□ -1.58
EPHB3P54753 OR51K1P-201ENST00000510214 950 ntBASIC5.16□□□□□ -1.58
EPHB3P54753 AC016559.2-201ENST00000510759 359 ntBASIC5.16□□□□□ -1.58
EPHB3P54753 ENPP7P9-201ENST00000514456 627 ntBASIC5.16□□□□□ -1.58
EPHB3P54753 SNORD60.2-201ENST00000516883 86 ntBASIC5.16□□□□□ -1.58
EPHB3P54753 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
EPHB3P54753 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC5.16□□□□□ -1.58
EPHB3P54753 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
EPHB3P54753 GSTP1P1-201ENST00000548078 319 ntBASIC5.16□□□□□ -1.58
EPHB3P54753 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.16□□□□□ -1.58
EPHB3P54753 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC5.16□□□□□ -1.58
EPHB3P54753 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC5.16□□□□□ -1.58
EPHB3P54753 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.16□□□□□ -1.58
EPHB3P54753 AC005668.1-201ENST00000571142 476 ntBASIC5.16□□□□□ -1.58
EPHB3P54753 AC021646.1-201ENST00000605469 484 ntBASIC5.16□□□□□ -1.58
EPHB3P54753 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC5.16□□□□□ -1.58
EPHB3P54753 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.16□□□□□ -1.58
EPHB3P54753 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.16□□□□□ -1.58
EPHB3P54753 AC233309.1-201ENST00000619522 751 ntBASIC5.16□□□□□ -1.58
EPHB3P54753 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.16□□□□□ -1.58
EPHB3P54753 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
EPHB3P54753 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
EPHB3P54753 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
EPHB3P54753 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
EPHB3P54753 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
EPHB3P54753 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
EPHB3P54753 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
EPHB3P54753 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
EPHB3P54753 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
EPHB3P54753 AP000542.2-201ENST00000623199 6179 ntBASIC5.15□□□□□ -1.58
EPHB3P54753 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
EPHB3P54753 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.15□□□□□ -1.58
EPHB3P54753 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.15□□□□□ -1.58
EPHB3P54753 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.15□□□□□ -1.58
EPHB3P54753 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
EPHB3P54753 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
EPHB3P54753 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
EPHB3P54753 RNU6-1120P-201ENST00000362988 108 ntBASIC5.15□□□□□ -1.59
EPHB3P54753 SNORA73.1-201ENST00000363107 205 ntBASIC5.15□□□□□ -1.59
EPHB3P54753 Y_RNA.133-201ENST00000363428 110 ntBASIC5.15□□□□□ -1.59
EPHB3P54753 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.15□□□□□ -1.59
EPHB3P54753 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
EPHB3P54753 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 170.3 ms