Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC022916.3-201ENST00000592961 742 ntBASIC5.3□□□□□ -1.56
EPHB3P54753 AC068790.5-201ENST00000602741 355 ntBASIC5.3□□□□□ -1.56
EPHB3P54753 MIR6798-201ENST00000612887 67 ntBASIC5.3□□□□□ -1.56
EPHB3P54753 RNA5SP439-201ENST00000617595 124 ntBASIC5.3□□□□□ -1.56
EPHB3P54753 AC009268.2-201ENST00000621925 457 ntBASIC5.3□□□□□ -1.56
EPHB3P54753 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.3□□□□□ -1.56
EPHB3P54753 AC138649.5-201ENST00000637456 137 ntBASIC5.3□□□□□ -1.56
EPHB3P54753 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
EPHB3P54753 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.3□□□□□ -1.56
EPHB3P54753 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
EPHB3P54753 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.3□□□□□ -1.56
EPHB3P54753 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.3□□□□□ -1.56
EPHB3P54753 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
EPHB3P54753 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
EPHB3P54753 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
EPHB3P54753 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.29□□□□□ -1.56
EPHB3P54753 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
EPHB3P54753 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
EPHB3P54753 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.29□□□□□ -1.56
EPHB3P54753 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.29□□□□□ -1.56
EPHB3P54753 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.29□□□□□ -1.56
EPHB3P54753 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
EPHB3P54753 RNA5SP453-201ENST00000362503 119 ntBASIC5.29□□□□□ -1.56
EPHB3P54753 MIR506-201ENST00000384998 124 ntBASIC5.29□□□□□ -1.56
EPHB3P54753 SNORA75.4-201ENST00000391278 119 ntBASIC5.29□□□□□ -1.56
EPHB3P54753 RNA5SP241-201ENST00000391326 114 ntBASIC5.29□□□□□ -1.56
EPHB3P54753 AL122016.1-201ENST00000403365 367 ntBASIC5.29□□□□□ -1.56
EPHB3P54753 AL354719.1-201ENST00000406535 843 ntBASIC5.29□□□□□ -1.56
EPHB3P54753 MIR1303-201ENST00000408625 86 ntBASIC5.29□□□□□ -1.56
EPHB3P54753 RN7SKP32-201ENST00000410167 303 ntBASIC5.29□□□□□ -1.56
EPHB3P54753 RPS7P15-201ENST00000415804 584 ntBASIC5.29□□□□□ -1.56
EPHB3P54753 AF186996.5-201ENST00000418098 904 ntBASIC5.29□□□□□ -1.56
EPHB3P54753 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC5.29□□□□□ -1.56
EPHB3P54753 MTCO3P46-201ENST00000425787 232 ntBASIC5.29□□□□□ -1.56
EPHB3P54753 RPL31P35-201ENST00000431058 377 ntBASIC5.29□□□□□ -1.56
EPHB3P54753 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.29□□□□□ -1.56
EPHB3P54753 AC004980.3-201ENST00000447046 365 ntBASIC5.29□□□□□ -1.56
EPHB3P54753 AL133244.1-201ENST00000456007 258 ntBASIC5.29□□□□□ -1.56
EPHB3P54753 NF1P3-201ENST00000457709 450 ntBASIC5.29□□□□□ -1.56
EPHB3P54753 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
EPHB3P54753 MTND1P3-201ENST00000484956 952 ntBASIC5.29□□□□□ -1.56
EPHB3P54753 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC5.29□□□□□ -1.56
EPHB3P54753 GAPDHP56-201ENST00000506031 988 ntBASIC5.29□□□□□ -1.56
EPHB3P54753 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC5.29□□□□□ -1.56
EPHB3P54753 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC5.29□□□□□ -1.56
EPHB3P54753 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC5.29□□□□□ -1.56
EPHB3P54753 AL671862.1-201ENST00000515851 349 ntBASIC5.29□□□□□ -1.56
EPHB3P54753 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.29□□□□□ -1.56
EPHB3P54753 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.29□□□□□ -1.56
EPHB3P54753 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC5.29□□□□□ -1.56
EPHB3P54753 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.29□□□□□ -1.56
EPHB3P54753 AC093012.1-202ENST00000549403 582 ntBASIC5.29□□□□□ -1.56
EPHB3P54753 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC5.29□□□□□ -1.56
EPHB3P54753 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5.29□□□□□ -1.56
EPHB3P54753 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC5.29□□□□□ -1.56
EPHB3P54753 AL390726.5-202ENST00000564800 256 ntBASIC5.29□□□□□ -1.56
EPHB3P54753 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC5.29□□□□□ -1.56
EPHB3P54753 MIR544B-201ENST00000582372 78 ntBASIC5.29□□□□□ -1.56
EPHB3P54753 SS18L2P2-201ENST00000583960 235 ntBASIC5.29□□□□□ -1.56
EPHB3P54753 AC243960.4-201ENST00000600532 288 ntBASIC5.29□□□□□ -1.56
EPHB3P54753 AL359999.1-201ENST00000604513 294 ntBASIC5.29□□□□□ -1.56
EPHB3P54753 AC004853.1-201ENST00000604902 698 ntBASIC5.29□□□□□ -1.56
EPHB3P54753 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.29□□□□□ -1.56
EPHB3P54753 AC231657.1-201ENST00000624313 397 ntBASIC5.29□□□□□ -1.56
EPHB3P54753 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.29□□□□□ -1.56
EPHB3P54753 AC026634.1-201ENST00000634369 198 ntBASIC5.29□□□□□ -1.56
EPHB3P54753 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
EPHB3P54753 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.29□□□□□ -1.56
EPHB3P54753 AC010928.1-201ENST00000592477 1447 ntBASIC5.29□□□□□ -1.56
EPHB3P54753 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC5.29□□□□□ -1.56
EPHB3P54753 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
EPHB3P54753 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
EPHB3P54753 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.29□□□□□ -1.56
EPHB3P54753 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.29□□□□□ -1.56
EPHB3P54753 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
EPHB3P54753 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
EPHB3P54753 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.28□□□□□ -1.56
EPHB3P54753 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.28□□□□□ -1.56
EPHB3P54753 CKAP2P1-201ENST00000555477 2049 ntBASIC5.28□□□□□ -1.56
EPHB3P54753 MTND5P3-201ENST00000438536 1800 ntBASIC5.28□□□□□ -1.56
EPHB3P54753 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.28□□□□□ -1.56
EPHB3P54753 GNG5P1-201ENST00000255500 204 ntBASIC5.28□□□□□ -1.56
EPHB3P54753 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
EPHB3P54753 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
EPHB3P54753 Y_RNA.159-201ENST00000363674 87 ntBASIC5.28□□□□□ -1.56
EPHB3P54753 NFIB-202ENST00000380924 840 ntTSL 5 BASIC5.28□□□□□ -1.56
EPHB3P54753 RNU1-39P-201ENST00000383897 165 ntBASIC5.28□□□□□ -1.56
EPHB3P54753 Y_RNA.422-201ENST00000384054 114 ntBASIC5.28□□□□□ -1.56
EPHB3P54753 RNU6-1160P-201ENST00000384546 104 ntBASIC5.28□□□□□ -1.56
EPHB3P54753 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
EPHB3P54753 CYB5AP4-201ENST00000396692 399 ntBASIC5.28□□□□□ -1.56
EPHB3P54753 RPA3-203ENST00000401447 414 ntTSL 3 BASIC5.28□□□□□ -1.56
EPHB3P54753 RN7SKP140-201ENST00000411196 284 ntBASIC5.28□□□□□ -1.56
EPHB3P54753 RNU6-373P-201ENST00000411247 98 ntBASIC5.28□□□□□ -1.56
EPHB3P54753 AL359704.1-201ENST00000411586 781 ntBASIC5.28□□□□□ -1.56
EPHB3P54753 AC092634.6-201ENST00000418558 192 ntBASIC5.28□□□□□ -1.56
EPHB3P54753 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5.28□□□□□ -1.56
EPHB3P54753 RAD23BP1-201ENST00000421404 1227 ntBASIC5.28□□□□□ -1.56
EPHB3P54753 RPL7P57-201ENST00000423238 740 ntBASIC5.28□□□□□ -1.56
EPHB3P54753 RPS27AP6-201ENST00000427962 448 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 210.1 ms