Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 SNORA19.2-201ENST00000516013 114 ntBASIC5.35□□□□□ -1.55
EPHB3P54753 RNA5SP228-201ENST00000516232 133 ntBASIC5.35□□□□□ -1.55
EPHB3P54753 RNU6-277P-201ENST00000516272 106 ntBASIC5.35□□□□□ -1.55
EPHB3P54753 RNA5SP43-201ENST00000516559 110 ntBASIC5.35□□□□□ -1.55
EPHB3P54753 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC5.35□□□□□ -1.55
EPHB3P54753 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.35□□□□□ -1.55
EPHB3P54753 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.35□□□□□ -1.55
EPHB3P54753 MAL2-203ENST00000534619 578 ntTSL 4 BASIC5.35□□□□□ -1.55
EPHB3P54753 AC020661.2-201ENST00000560114 134 ntBASIC5.35□□□□□ -1.55
EPHB3P54753 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.35□□□□□ -1.55
EPHB3P54753 MIR4307-201ENST00000582802 84 ntBASIC5.35□□□□□ -1.55
EPHB3P54753 RNU6ATAC35P-201ENST00000609276 444 ntBASIC5.35□□□□□ -1.55
EPHB3P54753 AC010632.3-201ENST00000611377 369 ntBASIC5.35□□□□□ -1.55
EPHB3P54753 AC074140.1-201ENST00000621617 208 ntBASIC5.35□□□□□ -1.55
EPHB3P54753 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.35□□□□□ -1.55
EPHB3P54753 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.35□□□□□ -1.55
EPHB3P54753 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.35□□□□□ -1.55
EPHB3P54753 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
EPHB3P54753 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
EPHB3P54753 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
EPHB3P54753 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.35□□□□□ -1.55
EPHB3P54753 AL022322.2-201ENST00000624072 20397 ntBASIC5.35□□□□□ -1.55
EPHB3P54753 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.35□□□□□ -1.55
EPHB3P54753 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
EPHB3P54753 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.34□□□□□ -1.55
EPHB3P54753 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.34□□□□□ -1.55
EPHB3P54753 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
EPHB3P54753 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
EPHB3P54753 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC5.34□□□□□ -1.55
EPHB3P54753 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
EPHB3P54753 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
EPHB3P54753 OR52B1P-201ENST00000316506 909 ntBASIC5.34□□□□□ -1.55
EPHB3P54753 Y_RNA.25-201ENST00000362528 102 ntBASIC5.34□□□□□ -1.55
EPHB3P54753 Y_RNA.157-201ENST00000363638 102 ntBASIC5.34□□□□□ -1.55
EPHB3P54753 SNORA63C-201ENST00000364578 129 ntBASIC5.34□□□□□ -1.55
EPHB3P54753 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
EPHB3P54753 RNU6-809P-201ENST00000384461 107 ntBASIC5.34□□□□□ -1.55
EPHB3P54753 SNORD116-23-201ENST00000384645 92 ntBASIC5.34□□□□□ -1.55
EPHB3P54753 SNORA48.4-201ENST00000391089 134 ntBASIC5.34□□□□□ -1.55
EPHB3P54753 Y_RNA.625-201ENST00000411256 107 ntBASIC5.34□□□□□ -1.55
EPHB3P54753 RNA5SP498-201ENST00000411342 120 ntBASIC5.34□□□□□ -1.55
EPHB3P54753 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.34□□□□□ -1.55
EPHB3P54753 AL354868.1-201ENST00000417077 482 ntBASIC5.34□□□□□ -1.55
EPHB3P54753 BOLA3P4-201ENST00000418151 400 ntBASIC5.34□□□□□ -1.55
EPHB3P54753 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC5.34□□□□□ -1.55
EPHB3P54753 AL158073.1-201ENST00000426848 1104 ntBASIC5.34□□□□□ -1.55
EPHB3P54753 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.34□□□□□ -1.55
EPHB3P54753 AC018644.1-201ENST00000429934 551 ntBASIC5.34□□□□□ -1.55
EPHB3P54753 SKP1P1-201ENST00000438081 489 ntBASIC5.34□□□□□ -1.55
EPHB3P54753 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.34□□□□□ -1.55
EPHB3P54753 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.34□□□□□ -1.55
EPHB3P54753 AC132479.1-201ENST00000449160 144 ntBASIC5.34□□□□□ -1.55
EPHB3P54753 Z82190.1-201ENST00000454534 490 ntBASIC5.34□□□□□ -1.55
EPHB3P54753 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC5.34□□□□□ -1.55
EPHB3P54753 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.34□□□□□ -1.55
EPHB3P54753 AC108161.1-201ENST00000461060 402 ntBASIC5.34□□□□□ -1.55
EPHB3P54753 RPL36AP51-201ENST00000487216 318 ntBASIC5.34□□□□□ -1.55
EPHB3P54753 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC5.34□□□□□ -1.55
EPHB3P54753 RN7SL591P-201ENST00000496150 292 ntBASIC5.34□□□□□ -1.55
EPHB3P54753 AC026427.2-201ENST00000506228 536 ntBASIC5.34□□□□□ -1.55
EPHB3P54753 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.34□□□□□ -1.55
EPHB3P54753 AC093809.1-201ENST00000509155 340 ntBASIC5.34□□□□□ -1.55
EPHB3P54753 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC5.34□□□□□ -1.55
EPHB3P54753 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.34□□□□□ -1.55
EPHB3P54753 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC5.34□□□□□ -1.55
EPHB3P54753 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.34□□□□□ -1.55
EPHB3P54753 AC138832.1-201ENST00000522871 556 ntBASIC5.34□□□□□ -1.55
EPHB3P54753 AC013828.2-201ENST00000532487 235 ntBASIC5.34□□□□□ -1.55
EPHB3P54753 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC5.34□□□□□ -1.55
EPHB3P54753 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC5.34□□□□□ -1.55
EPHB3P54753 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.34□□□□□ -1.55
EPHB3P54753 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC5.34□□□□□ -1.55
EPHB3P54753 AC009117.1-201ENST00000563948 554 ntBASIC5.34□□□□□ -1.55
EPHB3P54753 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC5.34□□□□□ -1.55
EPHB3P54753 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.34□□□□□ -1.55
EPHB3P54753 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.34□□□□□ -1.55
EPHB3P54753 BNIP3P23-201ENST00000599655 511 ntBASIC5.34□□□□□ -1.55
EPHB3P54753 AL031320.1-201ENST00000604177 357 ntBASIC5.34□□□□□ -1.55
EPHB3P54753 AL133255.1-201ENST00000606374 441 ntBASIC5.34□□□□□ -1.55
EPHB3P54753 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC5.34□□□□□ -1.55
EPHB3P54753 DLEU1_2.1-201ENST00000617920 342 ntBASIC5.34□□□□□ -1.55
EPHB3P54753 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
EPHB3P54753 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.34□□□□□ -1.55
EPHB3P54753 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
EPHB3P54753 MTCO1P14-201ENST00000441695 1559 ntBASIC5.33□□□□□ -1.56
EPHB3P54753 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
EPHB3P54753 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
EPHB3P54753 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
EPHB3P54753 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
EPHB3P54753 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.33□□□□□ -1.56
EPHB3P54753 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
EPHB3P54753 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
EPHB3P54753 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
EPHB3P54753 Y_RNA.144-201ENST00000363521 113 ntBASIC5.33□□□□□ -1.56
EPHB3P54753 RNU6-1322P-201ENST00000364309 107 ntBASIC5.33□□□□□ -1.56
EPHB3P54753 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.33□□□□□ -1.56
EPHB3P54753 AL390316.1-201ENST00000406279 553 ntBASIC5.33□□□□□ -1.56
EPHB3P54753 AL450338.1-201ENST00000407987 512 ntBASIC5.33□□□□□ -1.56
EPHB3P54753 RNU6-195P-201ENST00000411352 109 ntBASIC5.33□□□□□ -1.56
EPHB3P54753 RPL12P9-201ENST00000412942 488 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 184.7 ms