Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
EPHB3P54753 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
EPHB3P54753 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
EPHB3P54753 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.36□□□□□ -1.55
EPHB3P54753 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
EPHB3P54753 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
EPHB3P54753 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
EPHB3P54753 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
EPHB3P54753 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.36□□□□□ -1.55
EPHB3P54753 MIR133A2-201ENST00000347538 102 ntBASIC5.36□□□□□ -1.55
EPHB3P54753 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
EPHB3P54753 RNU6-451P-201ENST00000362921 107 ntBASIC5.36□□□□□ -1.55
EPHB3P54753 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
EPHB3P54753 IARS-201ENST00000375627 697 ntTSL 3 BASIC5.36□□□□□ -1.55
EPHB3P54753 AC004987.3-201ENST00000413879 771 ntBASIC5.36□□□□□ -1.55
EPHB3P54753 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.36□□□□□ -1.55
EPHB3P54753 NIPA2P1-201ENST00000426223 976 ntBASIC5.36□□□□□ -1.55
EPHB3P54753 RPL7AP49-201ENST00000429522 581 ntBASIC5.36□□□□□ -1.55
EPHB3P54753 AL591438.1-201ENST00000433508 581 ntBASIC5.36□□□□□ -1.55
EPHB3P54753 AL354714.3-201ENST00000447284 493 ntBASIC5.36□□□□□ -1.55
EPHB3P54753 SLC31A1P1-201ENST00000451221 567 ntBASIC5.36□□□□□ -1.55
EPHB3P54753 RN7SL319P-201ENST00000480656 221 ntBASIC5.36□□□□□ -1.55
EPHB3P54753 AC093278.1-201ENST00000494700 600 ntBASIC5.36□□□□□ -1.55
EPHB3P54753 MTND5P4-201ENST00000514978 288 ntBASIC5.36□□□□□ -1.55
EPHB3P54753 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.36□□□□□ -1.55
EPHB3P54753 AP000859.1-201ENST00000525536 307 ntBASIC5.36□□□□□ -1.55
EPHB3P54753 AC021006.3-201ENST00000530771 192 ntBASIC5.36□□□□□ -1.55
EPHB3P54753 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC5.36□□□□□ -1.55
EPHB3P54753 AC011611.1-201ENST00000552179 197 ntBASIC5.36□□□□□ -1.55
EPHB3P54753 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.36□□□□□ -1.55
EPHB3P54753 AL358913.1-201ENST00000554342 121 ntBASIC5.36□□□□□ -1.55
EPHB3P54753 AL845331.3-202ENST00000562856 261 ntBASIC5.36□□□□□ -1.55
EPHB3P54753 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC5.36□□□□□ -1.55
EPHB3P54753 AL355375.2-201ENST00000574825 175 ntBASIC5.36□□□□□ -1.55
EPHB3P54753 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.36□□□□□ -1.55
EPHB3P54753 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC5.36□□□□□ -1.55
EPHB3P54753 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.36□□□□□ -1.55
EPHB3P54753 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.36□□□□□ -1.55
EPHB3P54753 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.36□□□□□ -1.55
EPHB3P54753 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.36□□□□□ -1.55
EPHB3P54753 AC245014.2-201ENST00000603689 287 ntBASIC5.36□□□□□ -1.55
EPHB3P54753 AC007621.1-201ENST00000604544 437 ntBASIC5.36□□□□□ -1.55
EPHB3P54753 AC246785.4-201ENST00000605374 287 ntBASIC5.36□□□□□ -1.55
EPHB3P54753 AC011816.2-201ENST00000607089 556 ntBASIC5.36□□□□□ -1.55
EPHB3P54753 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
EPHB3P54753 AC087385.3-201ENST00000620477 187 ntBASIC5.36□□□□□ -1.55
EPHB3P54753 AC021106.3-201ENST00000623925 531 ntBASIC5.36□□□□□ -1.55
EPHB3P54753 CCT8P1-201ENST00000413611 1657 ntBASIC5.36□□□□□ -1.55
EPHB3P54753 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
EPHB3P54753 HSPA8P14-201ENST00000552265 1805 ntBASIC5.36□□□□□ -1.55
EPHB3P54753 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
EPHB3P54753 AL606537.1-201ENST00000607258 2011 ntBASIC5.36□□□□□ -1.55
EPHB3P54753 IRF5P1-201ENST00000504852 2164 ntBASIC5.36□□□□□ -1.55
EPHB3P54753 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.36□□□□□ -1.55
EPHB3P54753 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
EPHB3P54753 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
EPHB3P54753 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
EPHB3P54753 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.35□□□□□ -1.55
EPHB3P54753 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
EPHB3P54753 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.35□□□□□ -1.55
EPHB3P54753 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
EPHB3P54753 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
EPHB3P54753 AC006378.2-201ENST00000623178 2476 ntBASIC5.35□□□□□ -1.55
EPHB3P54753 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
EPHB3P54753 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
EPHB3P54753 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
EPHB3P54753 RBPJP2-201ENST00000618187 1444 ntBASIC5.35□□□□□ -1.55
EPHB3P54753 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.35□□□□□ -1.55
EPHB3P54753 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
EPHB3P54753 RNU6-582P-201ENST00000362989 107 ntBASIC5.35□□□□□ -1.55
EPHB3P54753 RNU6-492P-201ENST00000363035 104 ntBASIC5.35□□□□□ -1.55
EPHB3P54753 RNY4P34-201ENST00000364779 95 ntBASIC5.35□□□□□ -1.55
EPHB3P54753 RNU6-1122P-201ENST00000384449 107 ntBASIC5.35□□□□□ -1.55
EPHB3P54753 MIR606-201ENST00000384851 96 ntBASIC5.35□□□□□ -1.55
EPHB3P54753 AL136131.1-201ENST00000406079 803 ntBASIC5.35□□□□□ -1.55
EPHB3P54753 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC5.35□□□□□ -1.55
EPHB3P54753 EIF1P3-201ENST00000423841 334 ntBASIC5.35□□□□□ -1.55
EPHB3P54753 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.35□□□□□ -1.55
EPHB3P54753 AL445669.1-201ENST00000426743 755 ntBASIC5.35□□□□□ -1.55
EPHB3P54753 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.35□□□□□ -1.55
EPHB3P54753 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.35□□□□□ -1.55
EPHB3P54753 RPL19P16-201ENST00000433839 588 ntBASIC5.35□□□□□ -1.55
EPHB3P54753 AC112498.1-201ENST00000444401 332 ntBASIC5.35□□□□□ -1.55
EPHB3P54753 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC5.35□□□□□ -1.55
EPHB3P54753 ARPC3P5-201ENST00000448802 534 ntBASIC5.35□□□□□ -1.55
EPHB3P54753 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC5.35□□□□□ -1.55
EPHB3P54753 RNU6-420P-201ENST00000458780 107 ntBASIC5.35□□□□□ -1.55
EPHB3P54753 RPL7P48-201ENST00000461513 746 ntBASIC5.35□□□□□ -1.55
EPHB3P54753 RPS29P22-201ENST00000472363 168 ntBASIC5.35□□□□□ -1.55
EPHB3P54753 TRBV8-2-201ENST00000475637 270 ntBASIC5.35□□□□□ -1.55
EPHB3P54753 RN7SL814P-201ENST00000487715 300 ntBASIC5.35□□□□□ -1.55
EPHB3P54753 AC007686.1-201ENST00000488511 463 ntBASIC5.35□□□□□ -1.55
EPHB3P54753 AC010350.1-201ENST00000504908 231 ntBASIC5.35□□□□□ -1.55
EPHB3P54753 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.35□□□□□ -1.55
EPHB3P54753 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
EPHB3P54753 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
EPHB3P54753 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC5.35□□□□□ -1.55
EPHB3P54753 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC5.35□□□□□ -1.55
EPHB3P54753 BTF3P13-201ENST00000513224 490 ntBASIC5.35□□□□□ -1.55
EPHB3P54753 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 239.6 ms