Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHB9Q9Y5E1 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.39□□□□□ -1.39
PCDHB9Q9Y5E1 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHB9Q9Y5E1 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHB9Q9Y5E1 SMG1P7-201ENST00000565246 2704 ntBASIC6.39□□□□□ -1.39
PCDHB9Q9Y5E1 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
PCDHB9Q9Y5E1 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHB9Q9Y5E1 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHB9Q9Y5E1 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.39□□□□□ -1.39
PCDHB9Q9Y5E1 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 AC140479.2-201ENST00000421567 3130 ntBASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 Y_RNA.80-201ENST00000362996 102 ntBASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 RNU5E-6P-201ENST00000365574 115 ntBASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 RNY1P14-201ENST00000384426 108 ntBASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 Y_RNA.576-201ENST00000384781 102 ntBASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 RNU6-328P-201ENST00000390887 106 ntBASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 AL031985.1-201ENST00000392713 418 ntBASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 RN7SKP279-201ENST00000411383 298 ntBASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 RPL7P46-201ENST00000425129 740 ntBASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 PNKDP1-201ENST00000435914 430 ntBASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 MRPS21P3-201ENST00000436696 262 ntBASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 NXT1P1-201ENST00000458481 316 ntBASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 AC098847.1-201ENST00000473094 348 ntBASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 TRBV1-201ENST00000476502 284 ntBASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 AC058823.1-201ENST00000485315 474 ntBASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 RPL12P30-201ENST00000488389 499 ntBASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 HMGB1P21-201ENST00000502313 581 ntBASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 RNU6-1016P-201ENST00000516689 94 ntBASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 AC009812.2-201ENST00000517657 457 ntBASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 FAM60DP-201ENST00000524174 632 ntBASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 CYCSP38-201ENST00000559840 322 ntBASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 RN7SL802P-201ENST00000577858 299 ntBASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 BNIP3P16-201ENST00000589779 534 ntBASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 AL590099.1-201ENST00000615276 138 ntBASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHB9Q9Y5E1 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
PCDHB9Q9Y5E1 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.37□□□□□ -1.39
PCDHB9Q9Y5E1 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.37□□□□□ -1.39
PCDHB9Q9Y5E1 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHB9Q9Y5E1 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.37□□□□□ -1.39
PCDHB9Q9Y5E1 ANAPC1P1-201ENST00000426186 2145 ntBASIC6.37□□□□□ -1.39
PCDHB9Q9Y5E1 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHB9Q9Y5E1 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.37□□□□□ -1.39
PCDHB9Q9Y5E1 AC009313.2-201ENST00000417893 1941 ntBASIC6.37□□□□□ -1.39
PCDHB9Q9Y5E1 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
PCDHB9Q9Y5E1 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHB9Q9Y5E1 PANDAR-201ENST00000629595 1506 ntBASIC6.37□□□□□ -1.39
PCDHB9Q9Y5E1 SNORD3E-201ENST00000362899 217 ntBASIC6.37□□□□□ -1.39
PCDHB9Q9Y5E1 RNU6-1287P-201ENST00000362914 107 ntBASIC6.37□□□□□ -1.39
PCDHB9Q9Y5E1 RNA5SP391-201ENST00000363456 119 ntBASIC6.37□□□□□ -1.39
PCDHB9Q9Y5E1 RNU6-1243P-201ENST00000364028 107 ntBASIC6.37□□□□□ -1.39
PCDHB9Q9Y5E1 DEFB109C-201ENST00000382575 264 ntBASIC6.37□□□□□ -1.39
PCDHB9Q9Y5E1 DEFB109B-201ENST00000382656 264 ntBASIC6.37□□□□□ -1.39
PCDHB9Q9Y5E1 SNORA24.1-201ENST00000384401 135 ntBASIC6.37□□□□□ -1.39
PCDHB9Q9Y5E1 RNU6-1060P-201ENST00000384664 107 ntBASIC6.37□□□□□ -1.39
PCDHB9Q9Y5E1 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
PCDHB9Q9Y5E1 RNU4-6P-201ENST00000410804 122 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 154.9 ms