Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SHANK3Q9BYB0 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.02□□□□□ -1.77
SHANK3Q9BYB0 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.02□□□□□ -1.77
SHANK3Q9BYB0 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.02□□□□□ -1.77
SHANK3Q9BYB0 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.02□□□□□ -1.77
SHANK3Q9BYB0 AL365400.2-201ENST00000605604 902 ntBASIC4.02□□□□□ -1.77
SHANK3Q9BYB0 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.02□□□□□ -1.77
SHANK3Q9BYB0 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.02□□□□□ -1.77
SHANK3Q9BYB0 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
SHANK3Q9BYB0 FAM35DP-201ENST00000323387 2712 ntBASIC4.02□□□□□ -1.77
SHANK3Q9BYB0 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.02□□□□□ -1.77
SHANK3Q9BYB0 PROS2P-201ENST00000474651 1951 ntBASIC4.02□□□□□ -1.77
SHANK3Q9BYB0 NR1H5P-201ENST00000452683 1377 ntBASIC4.02□□□□□ -1.77
SHANK3Q9BYB0 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.01□□□□□ -1.77
SHANK3Q9BYB0 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.01□□□□□ -1.77
SHANK3Q9BYB0 AC112492.1-201ENST00000449607 712 ntBASIC4.01□□□□□ -1.77
SHANK3Q9BYB0 MTCO3P16-201ENST00000454456 754 ntBASIC4.01□□□□□ -1.77
SHANK3Q9BYB0 snoU13.15-201ENST00000459407 104 ntBASIC4.01□□□□□ -1.77
SHANK3Q9BYB0 AC133134.1-201ENST00000466800 359 ntBASIC4.01□□□□□ -1.77
SHANK3Q9BYB0 RPS4XP22-201ENST00000480755 780 ntBASIC4.01□□□□□ -1.77
SHANK3Q9BYB0 RPS26P24-201ENST00000497656 331 ntBASIC4.01□□□□□ -1.77
SHANK3Q9BYB0 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.01□□□□□ -1.77
SHANK3Q9BYB0 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.01□□□□□ -1.77
SHANK3Q9BYB0 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC4.01□□□□□ -1.77
SHANK3Q9BYB0 AC099506.2-201ENST00000623074 221 ntBASIC4.01□□□□□ -1.77
SHANK3Q9BYB0 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
SHANK3Q9BYB0 ELF2P3-201ENST00000445099 1506 ntBASIC4.01□□□□□ -1.77
SHANK3Q9BYB0 MTCO1P9-201ENST00000505577 1534 ntBASIC4.01□□□□□ -1.77
SHANK3Q9BYB0 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SHANK3Q9BYB0 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.01□□□□□ -1.77
SHANK3Q9BYB0 GCNT6-201ENST00000379591 934 ntBASIC4.01□□□□□ -1.77
SHANK3Q9BYB0 RNU1-89P-201ENST00000384592 164 ntBASIC4.01□□□□□ -1.77
SHANK3Q9BYB0 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.01□□□□□ -1.77
SHANK3Q9BYB0 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.01□□□□□ -1.77
SHANK3Q9BYB0 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.01□□□□□ -1.77
SHANK3Q9BYB0 TRBV8-2-201ENST00000475637 270 ntBASIC4.01□□□□□ -1.77
SHANK3Q9BYB0 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
SHANK3Q9BYB0 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.01□□□□□ -1.77
SHANK3Q9BYB0 AL034351.1-201ENST00000605288 668 ntBASIC4.01□□□□□ -1.77
SHANK3Q9BYB0 AC007619.2-201ENST00000605743 379 ntBASIC4.01□□□□□ -1.77
SHANK3Q9BYB0 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
SHANK3Q9BYB0 AC005332.5-201ENST00000591222 2919 ntBASIC4□□□□□ -1.77
SHANK3Q9BYB0 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
SHANK3Q9BYB0 OR52B1P-201ENST00000316506 909 ntBASIC4□□□□□ -1.77
SHANK3Q9BYB0 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4□□□□□ -1.77
SHANK3Q9BYB0 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4□□□□□ -1.77
SHANK3Q9BYB0 RPL7P12-201ENST00000446719 750 ntBASIC4□□□□□ -1.77
SHANK3Q9BYB0 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4□□□□□ -1.77
SHANK3Q9BYB0 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC4□□□□□ -1.77
SHANK3Q9BYB0 HIGD1AP13-201ENST00000509878 289 ntBASIC4□□□□□ -1.77
SHANK3Q9BYB0 NARSP2-201ENST00000518524 679 ntBASIC4□□□□□ -1.77
SHANK3Q9BYB0 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4□□□□□ -1.77
SHANK3Q9BYB0 ATP5F1P7-201ENST00000567330 760 ntBASIC4□□□□□ -1.77
SHANK3Q9BYB0 AC018552.3-201ENST00000567416 561 ntBASIC4□□□□□ -1.77
SHANK3Q9BYB0 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4□□□□□ -1.77
SHANK3Q9BYB0 uc_338.32-201ENST00000615087 172 ntBASIC4□□□□□ -1.77
SHANK3Q9BYB0 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
SHANK3Q9BYB0 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SHANK3Q9BYB0 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4□□□□□ -1.77
SHANK3Q9BYB0 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
SHANK3Q9BYB0 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
SHANK3Q9BYB0 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SHANK3Q9BYB0 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
SHANK3Q9BYB0 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
SHANK3Q9BYB0 AL079342.1-201ENST00000401460 267 ntBASIC3.99□□□□□ -1.77
SHANK3Q9BYB0 AL353692.2-201ENST00000407054 335 ntBASIC3.99□□□□□ -1.77
SHANK3Q9BYB0 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.99□□□□□ -1.77
SHANK3Q9BYB0 ELOCP23-201ENST00000452014 332 ntBASIC3.99□□□□□ -1.77
SHANK3Q9BYB0 DNAJC19P1-201ENST00000455312 319 ntBASIC3.99□□□□□ -1.77
SHANK3Q9BYB0 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC3.99□□□□□ -1.77
SHANK3Q9BYB0 SYT14P1-201ENST00000481459 721 ntBASIC3.99□□□□□ -1.77
SHANK3Q9BYB0 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.99□□□□□ -1.77
SHANK3Q9BYB0 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC3.99□□□□□ -1.77
SHANK3Q9BYB0 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
SHANK3Q9BYB0 AC008837.1-201ENST00000511513 412 ntBASIC3.99□□□□□ -1.77
SHANK3Q9BYB0 RNA5SP367-201ENST00000516557 118 ntBASIC3.99□□□□□ -1.77
SHANK3Q9BYB0 H3F3AP1-201ENST00000559984 334 ntBASIC3.99□□□□□ -1.77
SHANK3Q9BYB0 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.99□□□□□ -1.77
SHANK3Q9BYB0 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.99□□□□□ -1.77
SHANK3Q9BYB0 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.99□□□□□ -1.77
SHANK3Q9BYB0 AC004832.5-201ENST00000608677 401 ntBASIC3.99□□□□□ -1.77
SHANK3Q9BYB0 CYCSP41-201ENST00000616920 296 ntBASIC3.99□□□□□ -1.77
SHANK3Q9BYB0 LINC00901.1-201ENST00000617252 152 ntBASIC3.99□□□□□ -1.77
SHANK3Q9BYB0 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SHANK3Q9BYB0 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SHANK3Q9BYB0 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.99□□□□□ -1.77
SHANK3Q9BYB0 OR4G1P-202ENST00000641173 1788 ntBASIC3.99□□□□□ -1.77
SHANK3Q9BYB0 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
SHANK3Q9BYB0 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SHANK3Q9BYB0 CST9LP2-201ENST00000437612 320 ntBASIC3.98□□□□□ -1.77
SHANK3Q9BYB0 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC3.98□□□□□ -1.77
SHANK3Q9BYB0 RPS4XP6-201ENST00000477670 797 ntBASIC3.98□□□□□ -1.77
SHANK3Q9BYB0 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.98□□□□□ -1.77
SHANK3Q9BYB0 COX6CP8-201ENST00000522620 226 ntBASIC3.98□□□□□ -1.77
SHANK3Q9BYB0 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SHANK3Q9BYB0 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
SHANK3Q9BYB0 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SHANK3Q9BYB0 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.98□□□□□ -1.77
SHANK3Q9BYB0 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.98□□□□□ -1.77
SHANK3Q9BYB0 ELOCP29-201ENST00000588193 334 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 203.9 ms