Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.49□□□□□ -1.37
PCDHB9Q9Y5E1 AC104662.1-201ENST00000604448 511 ntBASIC6.49□□□□□ -1.37
PCDHB9Q9Y5E1 AC073046.2-201ENST00000604756 527 ntBASIC6.49□□□□□ -1.37
PCDHB9Q9Y5E1 AC012409.4-201ENST00000612923 249 ntBASIC6.49□□□□□ -1.37
PCDHB9Q9Y5E1 AC018628.1-201ENST00000624147 3819 ntBASIC6.49□□□□□ -1.37
PCDHB9Q9Y5E1 SNX18P12-201ENST00000624821 759 ntBASIC6.49□□□□□ -1.37
PCDHB9Q9Y5E1 AP000843.1-201ENST00000624880 701 ntBASIC6.49□□□□□ -1.37
PCDHB9Q9Y5E1 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHB9Q9Y5E1 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC6.49□□□□□ -1.37
PCDHB9Q9Y5E1 AL359976.1-201ENST00000418655 3528 ntBASIC6.49□□□□□ -1.37
PCDHB9Q9Y5E1 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHB9Q9Y5E1 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
PCDHB9Q9Y5E1 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHB9Q9Y5E1 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHB9Q9Y5E1 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHB9Q9Y5E1 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHB9Q9Y5E1 ZNF658B-201ENST00000602828 3408 ntBASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 TANK-205ENST00000405852 2155 ntTSL 5 BASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 NXPH1-205ENST00000602349 1953 ntBASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 COX6B1P3-201ENST00000312310 260 ntBASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 SNORA51.1-201ENST00000363243 140 ntBASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 RNA5SP510-201ENST00000364697 99 ntBASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 RNU6-1293P-201ENST00000384077 107 ntBASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 Y_RNA.476-201ENST00000384347 108 ntBASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 RNU6-601P-201ENST00000384540 107 ntBASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 RNU6-1222P-201ENST00000384615 107 ntBASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 RNU6-310P-201ENST00000384655 107 ntBASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 RNA5SP198-201ENST00000410376 127 ntBASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 HMGN1P20-201ENST00000411849 300 ntBASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 AL354707.3-201ENST00000427308 331 ntBASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 BRWD1P3-201ENST00000428816 390 ntBASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 RPL21P23-201ENST00000446654 460 ntBASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 AL031584.1-201ENST00000447169 754 ntBASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 U8.20-201ENST00000459445 131 ntBASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 AC068305.1-201ENST00000497406 726 ntBASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 AC079140.5-201ENST00000507882 310 ntBASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 AC011445.2-201ENST00000599274 173 ntBASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 RNU6-156P-201ENST00000621869 107 ntBASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 AC235565.1-201ENST00000456962 1325 ntBASIC6.48□□□□□ -1.37
PCDHB9Q9Y5E1 AC005618.1-201ENST00000606901 3148 ntBASIC6.47□□□□□ -1.37
PCDHB9Q9Y5E1 MFF-206ENST00000392059 1710 ntTSL 5 BASIC6.47□□□□□ -1.37
PCDHB9Q9Y5E1 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PCDHB9Q9Y5E1 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PCDHB9Q9Y5E1 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PCDHB9Q9Y5E1 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PCDHB9Q9Y5E1 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.47□□□□□ -1.37
PCDHB9Q9Y5E1 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
PCDHB9Q9Y5E1 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.47□□□□□ -1.37
PCDHB9Q9Y5E1 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PCDHB9Q9Y5E1 AC027088.4-201ENST00000611559 1947 ntBASIC6.47□□□□□ -1.37
PCDHB9Q9Y5E1 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PCDHB9Q9Y5E1 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.47□□□□□ -1.37
PCDHB9Q9Y5E1 RNU6-179P-201ENST00000363350 107 ntBASIC6.47□□□□□ -1.37
PCDHB9Q9Y5E1 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PCDHB9Q9Y5E1 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC6.47□□□□□ -1.37
PCDHB9Q9Y5E1 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC6.47□□□□□ -1.37
PCDHB9Q9Y5E1 RPL36P18-201ENST00000419316 318 ntBASIC6.47□□□□□ -1.37
PCDHB9Q9Y5E1 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.47□□□□□ -1.37
PCDHB9Q9Y5E1 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC6.47□□□□□ -1.37
PCDHB9Q9Y5E1 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC6.47□□□□□ -1.37
PCDHB9Q9Y5E1 AL391987.1-201ENST00000441025 200 ntBASIC6.47□□□□□ -1.37
PCDHB9Q9Y5E1 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC6.47□□□□□ -1.37
PCDHB9Q9Y5E1 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.47□□□□□ -1.37
PCDHB9Q9Y5E1 AC011225.1-201ENST00000457751 369 ntBASIC6.47□□□□□ -1.37
PCDHB9Q9Y5E1 AC004801.2-202ENST00000463559 283 ntBASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 153.9 ms