Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
SHANK3Q9BYB0 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SHANK3Q9BYB0 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.4□□□□□ -1.7
SHANK3Q9BYB0 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.4□□□□□ -1.7
SHANK3Q9BYB0 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
SHANK3Q9BYB0 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
SHANK3Q9BYB0 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
SHANK3Q9BYB0 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.4□□□□□ -1.71
SHANK3Q9BYB0 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.4□□□□□ -1.71
SHANK3Q9BYB0 AL359693.1-201ENST00000614959 2407 ntBASIC4.4□□□□□ -1.71
SHANK3Q9BYB0 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.4□□□□□ -1.71
SHANK3Q9BYB0 BX119904.1-201ENST00000432026 348 ntBASIC4.4□□□□□ -1.71
SHANK3Q9BYB0 ATP5C1P1-201ENST00000441945 895 ntBASIC4.4□□□□□ -1.71
SHANK3Q9BYB0 RAB28P3-201ENST00000448325 597 ntBASIC4.4□□□□□ -1.71
SHANK3Q9BYB0 RN7SL863P-201ENST00000462370 296 ntBASIC4.4□□□□□ -1.71
SHANK3Q9BYB0 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4.4□□□□□ -1.71
SHANK3Q9BYB0 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SHANK3Q9BYB0 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.4□□□□□ -1.71
SHANK3Q9BYB0 BTF3L4P4-201ENST00000506381 449 ntBASIC4.4□□□□□ -1.71
SHANK3Q9BYB0 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.4□□□□□ -1.71
SHANK3Q9BYB0 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.4□□□□□ -1.71
SHANK3Q9BYB0 IGHV3-29-201ENST00000604817 344 ntBASIC4.4□□□□□ -1.71
SHANK3Q9BYB0 AL732372.2-225ENST00000642124 456 ntBASIC4.4□□□□□ -1.71
SHANK3Q9BYB0 AC008079.2-201ENST00000623543 20396 ntBASIC4.4□□□□□ -1.71
SHANK3Q9BYB0 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SHANK3Q9BYB0 HSPA8P17-201ENST00000427029 1382 ntBASIC4.39□□□□□ -1.71
SHANK3Q9BYB0 AC021755.1-201ENST00000559747 1447 ntBASIC4.39□□□□□ -1.71
SHANK3Q9BYB0 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
SHANK3Q9BYB0 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SHANK3Q9BYB0 HMGN1P24-201ENST00000412282 298 ntBASIC4.39□□□□□ -1.71
SHANK3Q9BYB0 AL139132.1-201ENST00000431587 344 ntBASIC4.39□□□□□ -1.71
SHANK3Q9BYB0 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.39□□□□□ -1.71
SHANK3Q9BYB0 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.39□□□□□ -1.71
SHANK3Q9BYB0 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.39□□□□□ -1.71
SHANK3Q9BYB0 AC015802.5-201ENST00000607478 399 ntBASIC4.39□□□□□ -1.71
SHANK3Q9BYB0 AP003392.5-201ENST00000607857 415 ntBASIC4.39□□□□□ -1.71
SHANK3Q9BYB0 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
SHANK3Q9BYB0 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
SHANK3Q9BYB0 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SHANK3Q9BYB0 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SHANK3Q9BYB0 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
SHANK3Q9BYB0 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC4.38□□□□□ -1.71
SHANK3Q9BYB0 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
SHANK3Q9BYB0 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
SHANK3Q9BYB0 MTND4P22-201ENST00000413116 1169 ntBASIC4.38□□□□□ -1.71
SHANK3Q9BYB0 USP12PY-201ENST00000427677 1064 ntBASIC4.38□□□□□ -1.71
SHANK3Q9BYB0 AC000041.1-201ENST00000439655 175 ntBASIC4.38□□□□□ -1.71
SHANK3Q9BYB0 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.38□□□□□ -1.71
SHANK3Q9BYB0 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.38□□□□□ -1.71
SHANK3Q9BYB0 AC021678.1-201ENST00000505195 936 ntBASIC4.38□□□□□ -1.71
SHANK3Q9BYB0 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.38□□□□□ -1.71
SHANK3Q9BYB0 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.38□□□□□ -1.71
SHANK3Q9BYB0 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.38□□□□□ -1.71
SHANK3Q9BYB0 MIR7843-201ENST00000622274 79 ntBASIC4.38□□□□□ -1.71
SHANK3Q9BYB0 NMD3P1-201ENST00000439704 1488 ntBASIC4.38□□□□□ -1.71
SHANK3Q9BYB0 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.38□□□□□ -1.71
SHANK3Q9BYB0 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
SHANK3Q9BYB0 AC104446.1-201ENST00000613728 1321 ntBASIC4.38□□□□□ -1.71
SHANK3Q9BYB0 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SHANK3Q9BYB0 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.38□□□□□ -1.71
SHANK3Q9BYB0 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SHANK3Q9BYB0 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
SHANK3Q9BYB0 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SHANK3Q9BYB0 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
SHANK3Q9BYB0 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.38□□□□□ -1.71
SHANK3Q9BYB0 RNA5SP235-201ENST00000365411 114 ntBASIC4.38□□□□□ -1.71
SHANK3Q9BYB0 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SHANK3Q9BYB0 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SHANK3Q9BYB0 RNA5SP247-201ENST00000411181 105 ntBASIC4.38□□□□□ -1.71
SHANK3Q9BYB0 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.38□□□□□ -1.71
SHANK3Q9BYB0 AC073587.1-201ENST00000447093 876 ntBASIC4.38□□□□□ -1.71
SHANK3Q9BYB0 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.38□□□□□ -1.71
SHANK3Q9BYB0 RPS3AP50-201ENST00000487064 803 ntBASIC4.38□□□□□ -1.71
SHANK3Q9BYB0 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
SHANK3Q9BYB0 AC026801.2-201ENST00000515352 425 ntBASIC4.38□□□□□ -1.71
SHANK3Q9BYB0 RNU1-41P-201ENST00000516161 162 ntBASIC4.38□□□□□ -1.71
SHANK3Q9BYB0 RNU1-48P-201ENST00000516400 162 ntBASIC4.38□□□□□ -1.71
SHANK3Q9BYB0 AC004024.1-201ENST00000549244 247 ntBASIC4.38□□□□□ -1.71
SHANK3Q9BYB0 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.38□□□□□ -1.71
SHANK3Q9BYB0 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC4.38□□□□□ -1.71
SHANK3Q9BYB0 VN1R78P-201ENST00000597393 564 ntBASIC4.38□□□□□ -1.71
SHANK3Q9BYB0 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SHANK3Q9BYB0 SMG1P4-204ENST00000523028 4131 ntBASIC4.37□□□□□ -1.71
SHANK3Q9BYB0 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SHANK3Q9BYB0 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
SHANK3Q9BYB0 RNU4-82P-201ENST00000362443 140 ntBASIC4.37□□□□□ -1.71
SHANK3Q9BYB0 AL035407.1-201ENST00000429211 571 ntBASIC4.37□□□□□ -1.71
SHANK3Q9BYB0 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.37□□□□□ -1.71
SHANK3Q9BYB0 ANP32BP2-201ENST00000454525 545 ntBASIC4.37□□□□□ -1.71
SHANK3Q9BYB0 RPS20P22-201ENST00000473700 357 ntBASIC4.37□□□□□ -1.71
SHANK3Q9BYB0 RPL21P6-201ENST00000479171 504 ntBASIC4.37□□□□□ -1.71
SHANK3Q9BYB0 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.37□□□□□ -1.71
SHANK3Q9BYB0 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.37□□□□□ -1.71
SHANK3Q9BYB0 AC008885.1-201ENST00000514930 301 ntBASIC4.37□□□□□ -1.71
SHANK3Q9BYB0 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.37□□□□□ -1.71
SHANK3Q9BYB0 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.37□□□□□ -1.71
SHANK3Q9BYB0 AC087241.4-201ENST00000612441 480 ntBASIC4.37□□□□□ -1.71
SHANK3Q9BYB0 AL122125.1-201ENST00000616999 600 ntBASIC4.37□□□□□ -1.71
SHANK3Q9BYB0 AC018529.3-201ENST00000624212 2254 ntBASIC4.37□□□□□ -1.71
SHANK3Q9BYB0 AC007390.2-201ENST00000606229 3803 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 158 ms