Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC6.93□□□□□ -1.3
PCDHB9Q9Y5E1 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
PCDHB9Q9Y5E1 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC6.93□□□□□ -1.3
PCDHB9Q9Y5E1 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
PCDHB9Q9Y5E1 AC092125.1-201ENST00000562568 1995 ntBASIC6.93□□□□□ -1.3
PCDHB9Q9Y5E1 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
PCDHB9Q9Y5E1 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.93□□□□□ -1.3
PCDHB9Q9Y5E1 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
PCDHB9Q9Y5E1 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 AC066616.2-201ENST00000559334 1481 ntBASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 AC073343.1-201ENST00000328239 651 ntBASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 RNA5SP232-201ENST00000364144 119 ntBASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 SNORA64.3-201ENST00000365647 134 ntBASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 PPIAP26-201ENST00000377951 522 ntBASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 RNA5SP122-201ENST00000384457 108 ntBASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 MIR1-2-201ENST00000384961 85 ntBASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 CD3D-202ENST00000392884 476 ntTSL 2 BASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 AL031679.1-201ENST00000400616 525 ntBASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 AL356276.2-201ENST00000435919 558 ntBASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 AC234771.2-201ENST00000445718 597 ntBASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 TCEA1P1-201ENST00000449716 880 ntBASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 RPL7AP71-201ENST00000451120 739 ntBASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 AC007547.1-201ENST00000462177 490 ntBASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 MTND4P17-201ENST00000470444 350 ntBASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 AL163973.1-201ENST00000484753 577 ntBASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 AC093878.1-201ENST00000515630 432 ntBASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 OR4T1P-201ENST00000554933 911 ntBASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 AC026464.5-201ENST00000562497 722 ntBASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 MT1CP-201ENST00000567054 174 ntBASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 LARP7P2-201ENST00000575306 125 ntBASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 AC004908.1-201ENST00000606572 541 ntBASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 AL391813.2-201ENST00000609113 322 ntBASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 AL355472.4-201ENST00000610233 626 ntBASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 AC034229.6-201ENST00000623704 224 ntBASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 AC073592.6-201ENST00000624271 415 ntBASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 AC007993.1-201ENST00000621298 2430 ntBASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 TATDN2P3-201ENST00000452855 3665 ntBASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC6.92□□□□□ -1.3
PCDHB9Q9Y5E1 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 AC009237.3-203ENST00000442128 3551 ntBASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 RNU6-225P-201ENST00000384613 103 ntBASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 AL451054.2-201ENST00000420896 202 ntBASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 AC022022.1-201ENST00000430304 178 ntBASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 AL731534.1-201ENST00000434711 269 ntBASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 AC079781.2-201ENST00000446424 169 ntBASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 AC012512.1-201ENST00000446594 718 ntBASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 454.7 ms