Protein–RNA interactions for Protein: Q07988

YLR040C, Cell wall protein YLR040C, yeastyeast

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YLR040CQ07988 RTG2YGL252C 1767 nt7.5□□□□□ -1.21
YLR040CQ07988 YJL009WYJL009W 327 nt7.49□□□□□ -1.21
YLR040CQ07988 APS2YJR058C 444 nt7.49□□□□□ -1.21
YLR040CQ07988 YPL071CYPL071C 471 nt7.49□□□□□ -1.21
YLR040CQ07988 THP3YPR045C 1413 nt7.47□□□□□ -1.21
YLR040CQ07988 YKR012CYKR012C 378 nt7.47□□□□□ -1.21
YLR040CQ07988 RIB1YBL033C 1038 nt7.47□□□□□ -1.21
YLR040CQ07988 FSH2YMR222C 672 nt7.47□□□□□ -1.21
YLR040CQ07988 SLG1YOR008C 1137 nt7.46□□□□□ -1.22
YLR040CQ07988 ADE2YOR128C 1716 nt7.45□□□□□ -1.22
YLR040CQ07988 NAS2YIL007C 663 nt7.45□□□□□ -1.22
YLR040CQ07988 HIS3YOR202W 663 nt7.45□□□□□ -1.22
YLR040CQ07988 ADE16YLR028C 1776 nt7.45□□□□□ -1.22
YLR040CQ07988 DUS3YLR401C 2007 nt7.44□□□□□ -1.22
YLR040CQ07988 ABP1YCR088W 1779 nt7.44□□□□□ -1.22
YLR040CQ07988 SEM1YDR363W-A 270 nt7.44□□□□□ -1.22
YLR040CQ07988 BNS1YGR230W 414 nt7.44□□□□□ -1.22
YLR040CQ07988 YIA6YIL006W 1122 nt7.43□□□□□ -1.22
YLR040CQ07988 RSM7YJR113C 744 nt7.43□□□□□ -1.22
YLR040CQ07988 YJR149WYJR149W 1215 nt7.43□□□□□ -1.22
YLR040CQ07988 DIA4YHR011W 1341 nt7.43□□□□□ -1.22
YLR040CQ07988 YIR035CYIR035C 765 nt7.42□□□□□ -1.22
YLR040CQ07988 POP2YNR052C 1302 nt7.42□□□□□ -1.22
YLR040CQ07988 YBR056WYBR056W 1506 nt7.42□□□□□ -1.22
YLR040CQ07988 FIT1YDR534C 1587 nt7.42□□□□□ -1.22
YLR040CQ07988 GCD11YER025W 1584 nt7.42□□□□□ -1.22
YLR040CQ07988 SDS24YBR214W 1584 nt7.42□□□□□ -1.22
YLR040CQ07988 LYS20YDL182W 1287 nt7.41□□□□□ -1.22
YLR040CQ07988 BUB2YMR055C 921 nt7.41□□□□□ -1.22
YLR040CQ07988 MEP1YGR121C 1479 nt7.41□□□□□ -1.22
YLR040CQ07988 REC114YMR133W 1287 nt7.4□□□□□ -1.22
YLR040CQ07988 VBA3YCL069W 1377 nt7.4□□□□□ -1.22
YLR040CQ07988 UFD1YGR048W 1086 nt7.39□□□□□ -1.23
YLR040CQ07988 SOD2YHR008C 702 nt7.38□□□□□ -1.23
YLR040CQ07988 FAF1YIL019W 1041 nt7.38□□□□□ -1.23
YLR040CQ07988 PUS5YLR165C 765 nt7.38□□□□□ -1.23
YLR040CQ07988 CDD1YLR245C 429 nt7.36□□□□□ -1.23
YLR040CQ07988 NDE2YDL085W 1638 nt7.35□□□□□ -1.23
YLR040CQ07988 ENO1YGR254W 1314 nt7.35□□□□□ -1.23
YLR040CQ07988 TIF3YPR163C 1311 nt7.35□□□□□ -1.23
YLR040CQ07988 YCP4YCR004C 744 nt7.35□□□□□ -1.23
YLR040CQ07988 YDR509WYDR509W 348 nt7.35□□□□□ -1.23
YLR040CQ07988 Q0144Q0144 330 nt7.35□□□□□ -1.23
YLR040CQ07988 ADH3YMR083W 1128 nt7.35□□□□□ -1.23
YLR040CQ07988 YNL140CYNL140C 570 nt7.35□□□□□ -1.23
YLR040CQ07988 MAM3YOL060C 2121 nt7.35□□□□□ -1.23
YLR040CQ07988 INO1YJL153C 1602 nt7.34□□□□□ -1.23
YLR040CQ07988 ALR1YOL130W 2580 nt7.34□□□□□ -1.23
YLR040CQ07988 YFR020WYFR020W 699 nt7.34□□□□□ -1.23
YLR040CQ07988 PHB2YGR231C 933 nt7.34□□□□□ -1.23
YLR040CQ07988 PFS2YNL317W 1398 nt7.33□□□□□ -1.24
YLR040CQ07988 BUD31YCR063W 474 nt7.33□□□□□ -1.24
YLR040CQ07988 IGD1YFR017C 588 nt7.33□□□□□ -1.24
YLR040CQ07988 MOB1YIL106W 945 nt7.33□□□□□ -1.24
YLR040CQ07988 MDH2YOL126C 1134 nt7.33□□□□□ -1.24
YLR040CQ07988 FHN1YGR131W 525 nt7.32□□□□□ -1.24
YLR040CQ07988 SKG1YKR100C 1068 nt7.32□□□□□ -1.24
YLR040CQ07988 ERG6YML008C 1152 nt7.32□□□□□ -1.24
YLR040CQ07988 YRF1-1YDR545W 5391 nt7.32□□□□□ -1.24
YLR040CQ07988 YRF1-5YLR467W 5391 nt7.32□□□□□ -1.24
YLR040CQ07988 YRF1-8YOR396W 5391 nt7.32□□□□□ -1.24
YLR040CQ07988 YCR025CYCR025C 411 nt7.31□□□□□ -1.24
YLR040CQ07988 YLR460CYLR460C 1131 nt7.31□□□□□ -1.24
YLR040CQ07988 PET20YPL159C 762 nt7.31□□□□□ -1.24
YLR040CQ07988 HSV2YGR223C 1347 nt7.3□□□□□ -1.24
YLR040CQ07988 TGL5YOR081C 2250 nt7.3□□□□□ -1.24
YLR040CQ07988 GLY1YEL046C 1164 nt7.3□□□□□ -1.24
YLR040CQ07988 INM1YHR046C 888 nt7.3□□□□□ -1.24
YLR040CQ07988 ATG17YLR423C 1254 nt7.3□□□□□ -1.24
YLR040CQ07988 MRN1YPL184C 1839 nt7.29□□□□□ -1.24
YLR040CQ07988 YEL023CYEL023C 2049 nt7.29□□□□□ -1.24
YLR040CQ07988 TDA4YJR116W 840 nt7.29□□□□□ -1.24
YLR040CQ07988 NAS6YGR232W 687 nt7.28□□□□□ -1.24
YLR040CQ07988 CHS7YHR142W 951 nt7.27□□□□□ -1.25
YLR040CQ07988 OLA1YBR025C 1185 nt7.27□□□□□ -1.25
YLR040CQ07988 EHT1YBR177C 1356 nt7.26□□□□□ -1.25
YLR040CQ07988 SLM3YDL033C 1254 nt7.26□□□□□ -1.25
YLR040CQ07988 SAM50YNL026W 1455 nt7.25□□□□□ -1.25
YLR040CQ07988 snR78snR78 87 nt7.25□□□□□ -1.25
YLR040CQ07988 FLX1YIL134W 936 nt7.25□□□□□ -1.25
YLR040CQ07988 IPL1YPL209C 1104 nt7.25□□□□□ -1.25
YLR040CQ07988 LRO1YNR008W 1986 nt7.25□□□□□ -1.25
YLR040CQ07988 DIP5YPL265W 1827 nt7.24□□□□□ -1.25
YLR040CQ07988 RCR1YBR005W 642 nt7.24□□□□□ -1.25
YLR040CQ07988 PMT7YDR307W 1989 nt7.24□□□□□ -1.25
YLR040CQ07988 YJL045WYJL045W 1905 nt7.23□□□□□ -1.25
YLR040CQ07988 YJL107CYJL107C 1164 nt7.23□□□□□ -1.25
YLR040CQ07988 CYC3YAL039C 810 nt7.23□□□□□ -1.25
YLR040CQ07988 YLR280CYLR280C 351 nt7.23□□□□□ -1.25
YLR040CQ07988 RCF1YML030W 480 nt7.23□□□□□ -1.25
YLR040CQ07988 RNA170RNA170 169 nt7.23□□□□□ -1.25
YLR040CQ07988 MET22YOL064C 1074 nt7.23□□□□□ -1.25
YLR040CQ07988 WSC3YOL105C 1671 nt7.22□□□□□ -1.25
YLR040CQ07988 KTR4YBR199W 1395 nt7.22□□□□□ -1.25
YLR040CQ07988 tA(AGC)DtA(AGC)D 73 nt7.22□□□□□ -1.25
YLR040CQ07988 tA(AGC)FtA(AGC)F 73 nt7.22□□□□□ -1.25
YLR040CQ07988 tA(AGC)GtA(AGC)G 73 nt7.22□□□□□ -1.25
YLR040CQ07988 tA(AGC)HtA(AGC)H 73 nt7.22□□□□□ -1.25
YLR040CQ07988 tA(AGC)JtA(AGC)J 73 nt7.22□□□□□ -1.25
YLR040CQ07988 tA(AGC)K1tA(AGC)K1 73 nt7.22□□□□□ -1.25
Retrieved 100 of 7,029 protein–RNA pairs in 37.5 ms