Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL1A2P08123 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL1A2P08123 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC21.59■■□□□ 1.05
COL1A2P08123 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
COL1A2P08123 KRT18P21-201ENST00000515767 1272 ntBASIC21.59■■□□□ 1.05
COL1A2P08123 AC011298.2-201ENST00000617989 482 ntBASIC21.59■■□□□ 1.05
COL1A2P08123 AC130371.2-201ENST00000619443 611 ntBASIC21.59■■□□□ 1.05
COL1A2P08123 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.59■■□□□ 1.05
COL1A2P08123 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL1A2P08123 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.58■■□□□ 1.05
COL1A2P08123 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
COL1A2P08123 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL1A2P08123 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL1A2P08123 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL1A2P08123 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
COL1A2P08123 LINC01568-207ENST00000641790 1380 ntBASIC21.58■■□□□ 1.05
COL1A2P08123 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
COL1A2P08123 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
COL1A2P08123 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL1A2P08123 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.04
COL1A2P08123 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.58■■□□□ 1.04
COL1A2P08123 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.58■■□□□ 1.04
COL1A2P08123 Z85996.1-201ENST00000494644 937 ntBASIC21.58■■□□□ 1.04
COL1A2P08123 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21.58■■□□□ 1.04
COL1A2P08123 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
COL1A2P08123 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
COL1A2P08123 AP000692.2-201ENST00000608391 879 ntBASIC21.58■■□□□ 1.04
COL1A2P08123 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
COL1A2P08123 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
COL1A2P08123 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.57■■□□□ 1.04
COL1A2P08123 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
COL1A2P08123 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL1A2P08123 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL1A2P08123 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL1A2P08123 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.57■■□□□ 1.04
COL1A2P08123 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.57■■□□□ 1.04
COL1A2P08123 AC097488.1-201ENST00000507834 756 ntBASIC21.57■■□□□ 1.04
COL1A2P08123 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL1A2P08123 C2orf69P3-201ENST00000565542 1120 ntBASIC21.57■■□□□ 1.04
COL1A2P08123 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
COL1A2P08123 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC21.57■■□□□ 1.04
COL1A2P08123 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.57■■□□□ 1.04
COL1A2P08123 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
COL1A2P08123 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
COL1A2P08123 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.57■■□□□ 1.04
COL1A2P08123 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.57■■□□□ 1.04
COL1A2P08123 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
COL1A2P08123 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.57■■□□□ 1.04
COL1A2P08123 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL1A2P08123 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
COL1A2P08123 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
COL1A2P08123 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.56■■□□□ 1.04
COL1A2P08123 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL1A2P08123 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL1A2P08123 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL1A2P08123 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
COL1A2P08123 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL1A2P08123 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL1A2P08123 CLDN5-201ENST00000403084 2357 ntBASIC21.56■■□□□ 1.04
COL1A2P08123 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL1A2P08123 KRT18P22-201ENST00000402024 1347 ntBASIC21.56■■□□□ 1.04
COL1A2P08123 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL1A2P08123 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.55■■□□□ 1.04
COL1A2P08123 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.55■■□□□ 1.04
COL1A2P08123 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL1A2P08123 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
COL1A2P08123 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
COL1A2P08123 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL1A2P08123 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
COL1A2P08123 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.55■■□□□ 1.04
COL1A2P08123 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.55■■□□□ 1.04
COL1A2P08123 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.55■■□□□ 1.04
COL1A2P08123 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC21.55■■□□□ 1.04
COL1A2P08123 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.55■■□□□ 1.04
COL1A2P08123 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.55■■□□□ 1.04
COL1A2P08123 AL160286.2-201ENST00000567150 934 ntBASIC21.55■■□□□ 1.04
COL1A2P08123 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.55■■□□□ 1.04
COL1A2P08123 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.55■■□□□ 1.04
COL1A2P08123 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
COL1A2P08123 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
COL1A2P08123 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL1A2P08123 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
COL1A2P08123 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL1A2P08123 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL1A2P08123 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
COL1A2P08123 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL1A2P08123 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.54■■□□□ 1.04
COL1A2P08123 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.54■■□□□ 1.04
COL1A2P08123 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL1A2P08123 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL1A2P08123 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.54■■□□□ 1.04
COL1A2P08123 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL1A2P08123 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC21.54■■□□□ 1.04
COL1A2P08123 FAM207BP-201ENST00000447172 505 ntBASIC21.54■■□□□ 1.04
COL1A2P08123 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COL1A2P08123 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COL1A2P08123 DUT-205ENST00000558813 769 ntTSL 2 BASIC21.54■■□□□ 1.04
COL1A2P08123 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.54■■□□□ 1.04
COL1A2P08123 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21.54■■□□□ 1.04
COL1A2P08123 AC005363.2-201ENST00000618631 242 ntBASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms