Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KRT78Q8N1N4 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
KRT78Q8N1N4 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
KRT78Q8N1N4 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
KRT78Q8N1N4 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.98■□□□□ 0.63
KRT78Q8N1N4 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KRT78Q8N1N4 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
KRT78Q8N1N4 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
KRT78Q8N1N4 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
KRT78Q8N1N4 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.98■□□□□ 0.63
KRT78Q8N1N4 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
KRT78Q8N1N4 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.98■□□□□ 0.63
KRT78Q8N1N4 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.98■□□□□ 0.63
KRT78Q8N1N4 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.98■□□□□ 0.63
KRT78Q8N1N4 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KRT78Q8N1N4 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
KRT78Q8N1N4 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
KRT78Q8N1N4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
KRT78Q8N1N4 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT78Q8N1N4 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
KRT78Q8N1N4 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT78Q8N1N4 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT78Q8N1N4 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT78Q8N1N4 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT78Q8N1N4 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT78Q8N1N4 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.97■□□□□ 0.63
KRT78Q8N1N4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.97■□□□□ 0.63
KRT78Q8N1N4 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
KRT78Q8N1N4 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
KRT78Q8N1N4 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT78Q8N1N4 AC008687.6-201ENST00000596318 630 ntBASIC18.97■□□□□ 0.63
KRT78Q8N1N4 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.97■□□□□ 0.63
KRT78Q8N1N4 AC120498.8-201ENST00000614275 531 ntBASIC18.97■□□□□ 0.63
KRT78Q8N1N4 AL121906.2-201ENST00000621597 723 ntBASIC18.97■□□□□ 0.63
KRT78Q8N1N4 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
KRT78Q8N1N4 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.97■□□□□ 0.63
KRT78Q8N1N4 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
KRT78Q8N1N4 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
KRT78Q8N1N4 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
KRT78Q8N1N4 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.97■□□□□ 0.63
KRT78Q8N1N4 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.97■□□□□ 0.63
KRT78Q8N1N4 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.97■□□□□ 0.63
KRT78Q8N1N4 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT78Q8N1N4 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
KRT78Q8N1N4 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.97■□□□□ 0.63
KRT78Q8N1N4 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
KRT78Q8N1N4 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT78Q8N1N4 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
KRT78Q8N1N4 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT78Q8N1N4 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT78Q8N1N4 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT78Q8N1N4 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
KRT78Q8N1N4 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.96■□□□□ 0.63
KRT78Q8N1N4 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT78Q8N1N4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT78Q8N1N4 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
KRT78Q8N1N4 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
KRT78Q8N1N4 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT78Q8N1N4 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
KRT78Q8N1N4 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT78Q8N1N4 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.96■□□□□ 0.63
KRT78Q8N1N4 UNC93B4-201ENST00000505679 747 ntBASIC18.96■□□□□ 0.63
KRT78Q8N1N4 RNA5SP413-201ENST00000516373 109 ntBASIC18.96■□□□□ 0.63
KRT78Q8N1N4 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.96■□□□□ 0.63
KRT78Q8N1N4 UNC93B5-201ENST00000530315 699 ntBASIC18.96■□□□□ 0.63
KRT78Q8N1N4 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
KRT78Q8N1N4 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
KRT78Q8N1N4 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.96■□□□□ 0.63
KRT78Q8N1N4 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.96■□□□□ 0.63
KRT78Q8N1N4 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT78Q8N1N4 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
KRT78Q8N1N4 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT78Q8N1N4 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT78Q8N1N4 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT78Q8N1N4 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
KRT78Q8N1N4 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
KRT78Q8N1N4 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
KRT78Q8N1N4 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.96■□□□□ 0.63
KRT78Q8N1N4 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT78Q8N1N4 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
KRT78Q8N1N4 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.95■□□□□ 0.62
KRT78Q8N1N4 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KRT78Q8N1N4 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRT78Q8N1N4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.95■□□□□ 0.62
KRT78Q8N1N4 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRT78Q8N1N4 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KRT78Q8N1N4 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.95■□□□□ 0.62
KRT78Q8N1N4 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
KRT78Q8N1N4 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRT78Q8N1N4 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRT78Q8N1N4 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.95■□□□□ 0.62
KRT78Q8N1N4 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRT78Q8N1N4 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KRT78Q8N1N4 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRT78Q8N1N4 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
KRT78Q8N1N4 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.95■□□□□ 0.62
KRT78Q8N1N4 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KRT78Q8N1N4 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
KRT78Q8N1N4 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
KRT78Q8N1N4 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms