Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.24■□□□□ 0.35
Thumpd3P97770 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Thumpd3P97770 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Thumpd3P97770 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Thumpd3P97770 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Thumpd3P97770 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Thumpd3P97770 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Thumpd3P97770 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Thumpd3P97770 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
Thumpd3P97770 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Thumpd3P97770 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Thumpd3P97770 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Thumpd3P97770 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Thumpd3P97770 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Thumpd3P97770 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Thumpd3P97770 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Thumpd3P97770 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Thumpd3P97770 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Thumpd3P97770 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Thumpd3P97770 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Thumpd3P97770 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Thumpd3P97770 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Thumpd3P97770 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Thumpd3P97770 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Thumpd3P97770 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Thumpd3P97770 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Thumpd3P97770 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Thumpd3P97770 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Thumpd3P97770 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Thumpd3P97770 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Thumpd3P97770 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Thumpd3P97770 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Thumpd3P97770 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Thumpd3P97770 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Thumpd3P97770 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Thumpd3P97770 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Thumpd3P97770 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.22■□□□□ 0.35
Thumpd3P97770 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Thumpd3P97770 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.22■□□□□ 0.35
Thumpd3P97770 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Thumpd3P97770 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Thumpd3P97770 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Thumpd3P97770 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.22■□□□□ 0.35
Thumpd3P97770 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.22■□□□□ 0.35
Thumpd3P97770 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Thumpd3P97770 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.22■□□□□ 0.35
Thumpd3P97770 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Thumpd3P97770 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Thumpd3P97770 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Thumpd3P97770 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Thumpd3P97770 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Thumpd3P97770 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Thumpd3P97770 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Thumpd3P97770 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Thumpd3P97770 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Thumpd3P97770 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Thumpd3P97770 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Thumpd3P97770 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Thumpd3P97770 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Thumpd3P97770 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Thumpd3P97770 Gm715-201ENSMUST00000117865 831 ntBASIC17.21■□□□□ 0.35
Thumpd3P97770 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.21■□□□□ 0.35
Thumpd3P97770 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Thumpd3P97770 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Thumpd3P97770 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Thumpd3P97770 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Thumpd3P97770 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Thumpd3P97770 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Thumpd3P97770 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Thumpd3P97770 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Thumpd3P97770 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Thumpd3P97770 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.21■□□□□ 0.35
Thumpd3P97770 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Thumpd3P97770 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Thumpd3P97770 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Thumpd3P97770 Haglr-201ENSMUST00000100000 2085 ntBASIC17.2■□□□□ 0.34
Thumpd3P97770 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Thumpd3P97770 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.2■□□□□ 0.34
Thumpd3P97770 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Thumpd3P97770 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Thumpd3P97770 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Thumpd3P97770 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Thumpd3P97770 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Thumpd3P97770 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Thumpd3P97770 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Thumpd3P97770 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Thumpd3P97770 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.2■□□□□ 0.34
Thumpd3P97770 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.2■□□□□ 0.34
Thumpd3P97770 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.2■□□□□ 0.34
Thumpd3P97770 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.2■□□□□ 0.34
Thumpd3P97770 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.2■□□□□ 0.34
Thumpd3P97770 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Thumpd3P97770 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Thumpd3P97770 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Thumpd3P97770 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Thumpd3P97770 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Thumpd3P97770 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Thumpd3P97770 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Thumpd3P97770 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Thumpd3P97770 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms