Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNAP47Q5SQN1 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
SNAP47Q5SQN1 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SNAP47Q5SQN1 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNAP47Q5SQN1 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.19■□□□□ 0.66
SNAP47Q5SQN1 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.19■□□□□ 0.66
SNAP47Q5SQN1 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SNAP47Q5SQN1 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.19■□□□□ 0.66
SNAP47Q5SQN1 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.19■□□□□ 0.66
SNAP47Q5SQN1 AC113410.3-201ENST00000623366 203 ntBASIC19.19■□□□□ 0.66
SNAP47Q5SQN1 AC073912.3-201ENST00000624414 853 ntBASIC19.19■□□□□ 0.66
SNAP47Q5SQN1 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.19■□□□□ 0.66
SNAP47Q5SQN1 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SNAP47Q5SQN1 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SNAP47Q5SQN1 KRT17P2-201ENST00000300992 1314 ntBASIC19.19■□□□□ 0.66
SNAP47Q5SQN1 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SNAP47Q5SQN1 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SNAP47Q5SQN1 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNAP47Q5SQN1 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SNAP47Q5SQN1 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNAP47Q5SQN1 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SNAP47Q5SQN1 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNAP47Q5SQN1 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNAP47Q5SQN1 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SNAP47Q5SQN1 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SNAP47Q5SQN1 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SNAP47Q5SQN1 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNAP47Q5SQN1 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNAP47Q5SQN1 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNAP47Q5SQN1 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNAP47Q5SQN1 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNAP47Q5SQN1 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNAP47Q5SQN1 ECEL1P3-201ENST00000427961 737 ntBASIC19.18■□□□□ 0.66
SNAP47Q5SQN1 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.18■□□□□ 0.66
SNAP47Q5SQN1 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.18■□□□□ 0.66
SNAP47Q5SQN1 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.18■□□□□ 0.66
SNAP47Q5SQN1 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.18■□□□□ 0.66
SNAP47Q5SQN1 RARRES2P10-201ENST00000564312 460 ntBASIC19.18■□□□□ 0.66
SNAP47Q5SQN1 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SNAP47Q5SQN1 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.18■□□□□ 0.66
SNAP47Q5SQN1 AL031963.3-201ENST00000606441 850 ntBASIC19.18■□□□□ 0.66
SNAP47Q5SQN1 REXO1L12P-201ENST00000622156 912 ntBASIC19.18■□□□□ 0.66
SNAP47Q5SQN1 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SNAP47Q5SQN1 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.18■□□□□ 0.66
SNAP47Q5SQN1 HTR7P1-201ENST00000538670 1336 ntBASIC19.18■□□□□ 0.66
SNAP47Q5SQN1 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNAP47Q5SQN1 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
SNAP47Q5SQN1 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.18■□□□□ 0.66
SNAP47Q5SQN1 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNAP47Q5SQN1 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNAP47Q5SQN1 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNAP47Q5SQN1 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNAP47Q5SQN1 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SNAP47Q5SQN1 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNAP47Q5SQN1 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.18■□□□□ 0.66
SNAP47Q5SQN1 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNAP47Q5SQN1 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNAP47Q5SQN1 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.17■□□□□ 0.66
SNAP47Q5SQN1 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNAP47Q5SQN1 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SNAP47Q5SQN1 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SNAP47Q5SQN1 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SNAP47Q5SQN1 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SNAP47Q5SQN1 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SNAP47Q5SQN1 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.17■□□□□ 0.66
SNAP47Q5SQN1 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNAP47Q5SQN1 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SNAP47Q5SQN1 AC007225.1-201ENST00000566331 1836 ntBASIC19.17■□□□□ 0.66
SNAP47Q5SQN1 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SNAP47Q5SQN1 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SNAP47Q5SQN1 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.17■□□□□ 0.66
SNAP47Q5SQN1 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SNAP47Q5SQN1 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.17■□□□□ 0.66
SNAP47Q5SQN1 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SNAP47Q5SQN1 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNAP47Q5SQN1 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SNAP47Q5SQN1 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNAP47Q5SQN1 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SNAP47Q5SQN1 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
SNAP47Q5SQN1 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNAP47Q5SQN1 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNAP47Q5SQN1 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNAP47Q5SQN1 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.17■□□□□ 0.66
SNAP47Q5SQN1 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SNAP47Q5SQN1 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNAP47Q5SQN1 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SNAP47Q5SQN1 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SNAP47Q5SQN1 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
SNAP47Q5SQN1 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SNAP47Q5SQN1 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNAP47Q5SQN1 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SNAP47Q5SQN1 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.16■□□□□ 0.66
SNAP47Q5SQN1 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.16■□□□□ 0.66
SNAP47Q5SQN1 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNAP47Q5SQN1 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNAP47Q5SQN1 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.16■□□□□ 0.66
SNAP47Q5SQN1 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNAP47Q5SQN1 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNAP47Q5SQN1 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SNAP47Q5SQN1 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms