Protein–RNA interactions for Protein: A6NKF2

ARID3C, AT-rich interactive domain-containing protein 3C, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3CA6NKF2 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC31.12■■■□□ 2.57
ARID3CA6NKF2 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC31.12■■■□□ 2.57
ARID3CA6NKF2 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
ARID3CA6NKF2 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC31.12■■■□□ 2.57
ARID3CA6NKF2 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
ARID3CA6NKF2 AC139887.4-201ENST00000607877 719 ntBASIC31.12■■■□□ 2.57
ARID3CA6NKF2 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC31.12■■■□□ 2.57
ARID3CA6NKF2 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC31.12■■■□□ 2.57
ARID3CA6NKF2 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC31.12■■■□□ 2.57
ARID3CA6NKF2 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
ARID3CA6NKF2 AF106564.1-201ENST00000607058 2553 ntBASIC31.12■■■□□ 2.57
ARID3CA6NKF2 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
ARID3CA6NKF2 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC31.12■■■□□ 2.57
ARID3CA6NKF2 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC31.12■■■□□ 2.57
ARID3CA6NKF2 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
ARID3CA6NKF2 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC31.11■■■□□ 2.57
ARID3CA6NKF2 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
ARID3CA6NKF2 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC31.11■■■□□ 2.57
ARID3CA6NKF2 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
ARID3CA6NKF2 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
ARID3CA6NKF2 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC31.11■■■□□ 2.57
ARID3CA6NKF2 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
ARID3CA6NKF2 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC31.11■■■□□ 2.57
ARID3CA6NKF2 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
ARID3CA6NKF2 SLC25A1P4-201ENST00000567977 778 ntBASIC31.11■■■□□ 2.57
ARID3CA6NKF2 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC31.11■■■□□ 2.57
ARID3CA6NKF2 AC005229.4-201ENST00000610085 2198 ntBASIC31.11■■■□□ 2.57
ARID3CA6NKF2 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
ARID3CA6NKF2 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC31.1■■■□□ 2.57
ARID3CA6NKF2 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC31.1■■■□□ 2.57
ARID3CA6NKF2 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC31.1■■■□□ 2.57
ARID3CA6NKF2 AC063952.2-201ENST00000498792 1227 ntBASIC31.1■■■□□ 2.57
ARID3CA6NKF2 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
ARID3CA6NKF2 LTBR-211ENST00000543190 785 ntTSL 3 BASIC31.1■■■□□ 2.57
ARID3CA6NKF2 AC026271.3-201ENST00000571884 352 ntBASIC31.1■■■□□ 2.57
ARID3CA6NKF2 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC31.1■■■□□ 2.57
ARID3CA6NKF2 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
ARID3CA6NKF2 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
ARID3CA6NKF2 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
ARID3CA6NKF2 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC31.1■■■□□ 2.57
ARID3CA6NKF2 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
ARID3CA6NKF2 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
ARID3CA6NKF2 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC31.09■■■□□ 2.57
ARID3CA6NKF2 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC31.09■■■□□ 2.57
ARID3CA6NKF2 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
ARID3CA6NKF2 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC31.09■■■□□ 2.57
ARID3CA6NKF2 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
ARID3CA6NKF2 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC31.09■■■□□ 2.57
ARID3CA6NKF2 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
ARID3CA6NKF2 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC31.09■■■□□ 2.57
ARID3CA6NKF2 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC31.09■■■□□ 2.57
ARID3CA6NKF2 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC31.09■■■□□ 2.57
ARID3CA6NKF2 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC31.09■■■□□ 2.57
ARID3CA6NKF2 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC31.09■■■□□ 2.57
ARID3CA6NKF2 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC31.09■■■□□ 2.57
ARID3CA6NKF2 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC31.08■■■□□ 2.57
ARID3CA6NKF2 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
ARID3CA6NKF2 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
ARID3CA6NKF2 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC31.08■■■□□ 2.57
ARID3CA6NKF2 EP400NL-214ENST00000641289 2402 ntBASIC31.08■■■□□ 2.57
ARID3CA6NKF2 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
ARID3CA6NKF2 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
ARID3CA6NKF2 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC31.08■■■□□ 2.57
ARID3CA6NKF2 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC31.08■■■□□ 2.57
ARID3CA6NKF2 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.57
ARID3CA6NKF2 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC31.07■■■□□ 2.57
ARID3CA6NKF2 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC31.07■■■□□ 2.56
ARID3CA6NKF2 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
ARID3CA6NKF2 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC31.07■■■□□ 2.56
ARID3CA6NKF2 COPE-203ENST00000351079 907 ntTSL 2 BASIC31.07■■■□□ 2.56
ARID3CA6NKF2 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC31.07■■■□□ 2.56
ARID3CA6NKF2 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC31.07■■■□□ 2.56
ARID3CA6NKF2 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC31.06■■■□□ 2.56
ARID3CA6NKF2 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC31.06■■■□□ 2.56
ARID3CA6NKF2 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
ARID3CA6NKF2 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
ARID3CA6NKF2 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
ARID3CA6NKF2 HIST1H2APS4-201ENST00000362070 348 ntBASIC31.06■■■□□ 2.56
ARID3CA6NKF2 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
ARID3CA6NKF2 BX664615.1-201ENST00000443558 458 ntBASIC31.06■■■□□ 2.56
ARID3CA6NKF2 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC31.06■■■□□ 2.56
ARID3CA6NKF2 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC31.06■■■□□ 2.56
ARID3CA6NKF2 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
ARID3CA6NKF2 DPP3P2-201ENST00000416030 1696 ntBASIC31.06■■■□□ 2.56
ARID3CA6NKF2 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
ARID3CA6NKF2 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
ARID3CA6NKF2 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
ARID3CA6NKF2 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC31.05■■■□□ 2.56
ARID3CA6NKF2 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
ARID3CA6NKF2 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC31.05■■■□□ 2.56
ARID3CA6NKF2 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
ARID3CA6NKF2 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC31.05■■■□□ 2.56
ARID3CA6NKF2 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC31.05■■■□□ 2.56
ARID3CA6NKF2 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
ARID3CA6NKF2 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC31.05■■■□□ 2.56
ARID3CA6NKF2 DGCR10-201ENST00000609839 495 ntBASIC31.05■■■□□ 2.56
ARID3CA6NKF2 MED25-212ENST00000618715 1467 ntTSL 5 BASIC31.05■■■□□ 2.56
ARID3CA6NKF2 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC31.05■■■□□ 2.56
ARID3CA6NKF2 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC31.05■■■□□ 2.56
ARID3CA6NKF2 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC31.05■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms