Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
TRAV8-6A0A0B4J262 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
TRAV8-6A0A0B4J262 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV8-6A0A0B4J262 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV8-6A0A0B4J262 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
TRAV8-6A0A0B4J262 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
TRAV8-6A0A0B4J262 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV8-6A0A0B4J262 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC14.61□□□□□ -0.07
TRAV8-6A0A0B4J262 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV8-6A0A0B4J262 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TRAV8-6A0A0B4J262 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV8-6A0A0B4J262 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
TRAV8-6A0A0B4J262 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV8-6A0A0B4J262 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV8-6A0A0B4J262 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV8-6A0A0B4J262 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV8-6A0A0B4J262 YBX1P1-201ENST00000445822 960 ntBASIC14.61□□□□□ -0.07
TRAV8-6A0A0B4J262 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
TRAV8-6A0A0B4J262 AC079140.4-201ENST00000507448 529 ntBASIC14.61□□□□□ -0.07
TRAV8-6A0A0B4J262 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC14.61□□□□□ -0.07
TRAV8-6A0A0B4J262 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC14.61□□□□□ -0.07
TRAV8-6A0A0B4J262 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC14.61□□□□□ -0.07
TRAV8-6A0A0B4J262 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
TRAV8-6A0A0B4J262 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV8-6A0A0B4J262 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV8-6A0A0B4J262 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
TRAV8-6A0A0B4J262 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TRAV8-6A0A0B4J262 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV8-6A0A0B4J262 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV8-6A0A0B4J262 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC14.61□□□□□ -0.07
TRAV8-6A0A0B4J262 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV8-6A0A0B4J262 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV8-6A0A0B4J262 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAV8-6A0A0B4J262 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV8-6A0A0B4J262 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV8-6A0A0B4J262 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAV8-6A0A0B4J262 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV8-6A0A0B4J262 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
TRAV8-6A0A0B4J262 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC14.6□□□□□ -0.07
TRAV8-6A0A0B4J262 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAV8-6A0A0B4J262 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
TRAV8-6A0A0B4J262 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
TRAV8-6A0A0B4J262 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAV8-6A0A0B4J262 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV8-6A0A0B4J262 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAV8-6A0A0B4J262 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV8-6A0A0B4J262 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV8-6A0A0B4J262 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV8-6A0A0B4J262 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV8-6A0A0B4J262 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC14.6□□□□□ -0.07
TRAV8-6A0A0B4J262 SP2-202ENST00000613139 908 ntTSL 5 BASIC14.6□□□□□ -0.07
TRAV8-6A0A0B4J262 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV8-6A0A0B4J262 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV8-6A0A0B4J262 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV8-6A0A0B4J262 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV8-6A0A0B4J262 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC14.6□□□□□ -0.07
TRAV8-6A0A0B4J262 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
TRAV8-6A0A0B4J262 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV8-6A0A0B4J262 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC14.6□□□□□ -0.07
TRAV8-6A0A0B4J262 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
TRAV8-6A0A0B4J262 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
TRAV8-6A0A0B4J262 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
TRAV8-6A0A0B4J262 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV8-6A0A0B4J262 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV8-6A0A0B4J262 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TRAV8-6A0A0B4J262 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAV8-6A0A0B4J262 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV8-6A0A0B4J262 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV8-6A0A0B4J262 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAV8-6A0A0B4J262 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV8-6A0A0B4J262 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
TRAV8-6A0A0B4J262 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV8-6A0A0B4J262 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC14.59□□□□□ -0.07
TRAV8-6A0A0B4J262 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC14.59□□□□□ -0.07
TRAV8-6A0A0B4J262 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC14.59□□□□□ -0.07
TRAV8-6A0A0B4J262 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC14.59□□□□□ -0.07
TRAV8-6A0A0B4J262 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC14.59□□□□□ -0.07
TRAV8-6A0A0B4J262 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC14.59□□□□□ -0.07
TRAV8-6A0A0B4J262 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV8-6A0A0B4J262 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV8-6A0A0B4J262 PXK-203ENST00000383715 1756 ntTSL 5 BASIC14.59□□□□□ -0.07
TRAV8-6A0A0B4J262 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV8-6A0A0B4J262 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAV8-6A0A0B4J262 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV8-6A0A0B4J262 PARN-205ENST00000539279 1557 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAV8-6A0A0B4J262 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV8-6A0A0B4J262 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV8-6A0A0B4J262 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAV8-6A0A0B4J262 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAV8-6A0A0B4J262 AC055733.4-201ENST00000638462 1354 ntBASIC14.59□□□□□ -0.07
TRAV8-6A0A0B4J262 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
TRAV8-6A0A0B4J262 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV8-6A0A0B4J262 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC14.58□□□□□ -0.07
TRAV8-6A0A0B4J262 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRAV8-6A0A0B4J262 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC14.58□□□□□ -0.07
TRAV8-6A0A0B4J262 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.07
TRAV8-6A0A0B4J262 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
TRAV8-6A0A0B4J262 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRAV8-6A0A0B4J262 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRAV8-6A0A0B4J262 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms