Protein–RNA interactions for Protein: Q08957

AFT2, Iron-regulated transcriptional activator AFT2, yeastyeast

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
AFT2Q08957 BEM3YPL115C 3387 nt1.19□□□□□ -2.22
AFT2Q08957 AI1Q0050 2505 nt1.18□□□□□ -2.22
AFT2Q08957 NST1YNL091W 3723 nt1.17□□□□□ -2.22
AFT2Q08957 snR69snR69 101 nt1.17□□□□□ -2.22
AFT2Q08957 YDL159C-BYDL159C-B 177 nt1.17□□□□□ -2.22
AFT2Q08957 YNL054W-BYNL054W-B 5250 nt1.17□□□□□ -2.22
AFT2Q08957 PRP16YKR086W 3216 nt1.17□□□□□ -2.22
AFT2Q08957 SEC8YPR055W 3198 nt1.16□□□□□ -2.22
AFT2Q08957 YKL096C-BYKL096C-B 150 nt1.16□□□□□ -2.22
AFT2Q08957 YML054C-AYML054C-A 159 nt1.16□□□□□ -2.22
AFT2Q08957 CLU1YMR012W 3834 nt1.16□□□□□ -2.22
AFT2Q08957 SWI4YER111C 3282 nt1.16□□□□□ -2.22
AFT2Q08957 YGR130CYGR130C 2451 nt1.15□□□□□ -2.22
AFT2Q08957 CSE1YGL238W 2883 nt1.15□□□□□ -2.23
AFT2Q08957 snR75snR75 89 nt1.13□□□□□ -2.23
AFT2Q08957 tV(UAC)BtV(UAC)B 74 nt1.13□□□□□ -2.23
AFT2Q08957 tV(UAC)DtV(UAC)D 74 nt1.13□□□□□ -2.23
AFT2Q08957 YLR399W-AYLR399W-A 105 nt1.13□□□□□ -2.23
AFT2Q08957 BUD3YCL014W 4911 nt1.12□□□□□ -2.23
AFT2Q08957 RPL41AYDL184C 78 nt1.11□□□□□ -2.23
AFT2Q08957 RDS3YPR094W 324 nt1.11□□□□□ -2.23
AFT2Q08957 YSP1YHR155W 3687 nt1.11□□□□□ -2.23
AFT2Q08957 IML1YJR138W 4755 nt1.11□□□□□ -2.23
AFT2Q08957 YHR180C-BYHR180C-B 105 nt1.1□□□□□ -2.23
AFT2Q08957 NIP1YMR309C 2439 nt1.1□□□□□ -2.23
AFT2Q08957 SPT7YBR081C 3999 nt1.09□□□□□ -2.24
AFT2Q08957 YBR296C-AYBR296C-A 120 nt1.08□□□□□ -2.24
AFT2Q08957 YJR029WYJR029W 5268 nt1.08□□□□□ -2.24
AFT2Q08957 YPR137C-BYPR137C-B 5268 nt1.08□□□□□ -2.24
AFT2Q08957 SKI7YOR076C 2244 nt1.07□□□□□ -2.24
AFT2Q08957 NUP145YGL092W 3954 nt1.07□□□□□ -2.24
AFT2Q08957 YGR122C-AYGR122C-A 129 nt1.06□□□□□ -2.24
AFT2Q08957 PAU12YGR294W 363 nt1.06□□□□□ -2.24
AFT2Q08957 HUG1YML058W-A 207 nt1.05□□□□□ -2.24
AFT2Q08957 SCC2YDR180W 4482 nt1.03□□□□□ -2.24
AFT2Q08957 VAM6YDL077C 3150 nt1.03□□□□□ -2.24
AFT2Q08957 YLL006W-AYLL006W-A 177 nt1.01□□□□□ -2.25
AFT2Q08957 PAU24YBR301W 363 nt1.01□□□□□ -2.25
AFT2Q08957 BUL2YML111W 2763 nt1.01□□□□□ -2.25
AFT2Q08957 tQ(UUG)QtQ(UUG)Q 76 nt0.96□□□□□ -2.26
AFT2Q08957 YJL077W-AYJL077W-A 87 nt0.96□□□□□ -2.26
AFT2Q08957 RKR1YMR247C 4689 nt0.96□□□□□ -2.26
AFT2Q08957 EMT1tM(CAU)D 73 nt0.95□□□□□ -2.26
AFT2Q08957 EMT5tM(CAU)J1 73 nt0.95□□□□□ -2.26
AFT2Q08957 EMT3tM(CAU)J2 73 nt0.95□□□□□ -2.26
AFT2Q08957 EMT4tM(CAU)M 73 nt0.95□□□□□ -2.26
AFT2Q08957 EMT2tM(CAU)O2 73 nt0.95□□□□□ -2.26
AFT2Q08957 PET111YMR257C 2403 nt0.94□□□□□ -2.26
AFT2Q08957 DOP1YDR141C 5097 nt0.93□□□□□ -2.26
AFT2Q08957 YOR192C-BYOR192C-B 5313 nt0.92□□□□□ -2.26
AFT2Q08957 YER090C-AYER090C-A 90 nt0.91□□□□□ -2.26
AFT2Q08957 YPR117WYPR117W 7470 nt0.82□□□□□ -2.28
AFT2Q08957 snR67snR67 82 nt0.78□□□□□ -2.28
AFT2Q08957 MLP2YIL149C 5040 nt0.76□□□□□ -2.29
AFT2Q08957 tT(AGU)BtT(AGU)B 73 nt0.76□□□□□ -2.29
AFT2Q08957 tT(AGU)CtT(AGU)C 73 nt0.76□□□□□ -2.29
AFT2Q08957 tT(AGU)DtT(AGU)D 73 nt0.76□□□□□ -2.29
AFT2Q08957 tT(AGU)HtT(AGU)H 73 nt0.76□□□□□ -2.29
AFT2Q08957 tT(AGU)I1tT(AGU)I1 73 nt0.76□□□□□ -2.29
AFT2Q08957 tT(AGU)I2tT(AGU)I2 73 nt0.76□□□□□ -2.29
AFT2Q08957 tT(AGU)JtT(AGU)J 73 nt0.76□□□□□ -2.29
AFT2Q08957 tT(AGU)N1tT(AGU)N1 73 nt0.76□□□□□ -2.29
AFT2Q08957 tT(AGU)N2tT(AGU)N2 73 nt0.76□□□□□ -2.29
AFT2Q08957 tT(AGU)O1tT(AGU)O1 73 nt0.76□□□□□ -2.29
AFT2Q08957 tT(AGU)O2tT(AGU)O2 73 nt0.76□□□□□ -2.29
AFT2Q08957 YMR160WYMR160W 2451 nt0.76□□□□□ -2.29
AFT2Q08957 tV(UAC)QtV(UAC)Q 76 nt0.73□□□□□ -2.29
AFT2Q08957 YDL114W-AYDL114W-A 114 nt0.72□□□□□ -2.29
AFT2Q08957 YBL100W-BYBL100W-B 5313 nt0.71□□□□□ -2.3
AFT2Q08957 LTE1YAL024C 4308 nt0.7□□□□□ -2.3
AFT2Q08957 YPR159C-AYPR159C-A 102 nt0.7□□□□□ -2.3
AFT2Q08957 YKL106C-AYKL106C-A 120 nt0.69□□□□□ -2.3
AFT2Q08957 YOR376W-AYOR376W-A 156 nt0.68□□□□□ -2.3
AFT2Q08957 THO2YNL139C 4794 nt0.66□□□□□ -2.3
AFT2Q08957 YMR272W-AYMR272W-A 114 nt0.64□□□□□ -2.31
AFT2Q08957 UTP10YJL109C 5310 nt0.62□□□□□ -2.31
AFT2Q08957 IQG1YPL242C 4488 nt0.57□□□□□ -2.32
AFT2Q08957 YML100W-AYML100W-A 174 nt0.55□□□□□ -2.32
AFT2Q08957 snR40snR40 97 nt0.54□□□□□ -2.32
AFT2Q08957 snR77snR77 88 nt0.49□□□□□ -2.33
AFT2Q08957 SOV1YMR066W 2697 nt0.49□□□□□ -2.33
AFT2Q08957 YOR316C-AYOR316C-A 210 nt0.48□□□□□ -2.33
AFT2Q08957 UTP20YBL004W 7482 nt0.48□□□□□ -2.33
AFT2Q08957 tF(GAA)BtF(GAA)B 73 nt0.43□□□□□ -2.34
AFT2Q08957 tF(GAA)FtF(GAA)F 73 nt0.43□□□□□ -2.34
AFT2Q08957 tF(GAA)GtF(GAA)G 73 nt0.43□□□□□ -2.34
AFT2Q08957 tF(GAA)H1tF(GAA)H1 73 nt0.43□□□□□ -2.34
AFT2Q08957 tF(GAA)H2tF(GAA)H2 73 nt0.43□□□□□ -2.34
AFT2Q08957 tF(GAA)MtF(GAA)M 73 nt0.43□□□□□ -2.34
AFT2Q08957 tF(GAA)P1tF(GAA)P1 73 nt0.43□□□□□ -2.34
AFT2Q08957 tF(GAA)P2tF(GAA)P2 73 nt0.43□□□□□ -2.34
AFT2Q08957 YOR186C-AYOR186C-A 210 nt0.43□□□□□ -2.34
AFT2Q08957 FMP27YLR454W 7887 nt0.43□□□□□ -2.34
AFT2Q08957 MLP1YKR095W 5628 nt0.41□□□□□ -2.34
AFT2Q08957 SBH2YER019C-A 267 nt0.41□□□□□ -2.34
AFT2Q08957 ESP1YGR098C 4893 nt0.39□□□□□ -2.35
AFT2Q08957 YKL145W-AYKL145W-A 93 nt0.38□□□□□ -2.35
AFT2Q08957 YOL014WYOL014W 375 nt0.35□□□□□ -2.35
AFT2Q08957 PAU9YBL108C-A 129 nt0.31□□□□□ -2.36
AFT2Q08957 snR128snR128 126 nt0.29□□□□□ -2.36
Retrieved 100 of 7,029 protein–RNA pairs in 153.7 ms