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Protein–RNA interactions for Protein: Q07887
LDB18, Protein LDB18, yeast
Predictions only
Length
179 aa
.
Download Table
Protein
RNA
Prediction (catRAPID)
Interaction (RIP-Chip)
Gene
UniProt Accession
Gene
Ensembl Transcript ID
Length
Transcript Status
Prediction Score
Prediction z-Score
Detected Interaction
LDB18
Q07887
tD(GUC)Q
tD(GUC)Q
75 nt
-1.71
□□□□□ -2.68
LDB18
Q07887
YLR286W-A
YLR286W-A
135 nt
-1.72
□□□□□ -2.68
LDB18
Q07887
CDC65
tQ(CUG)M
72 nt
-1.73
□□□□□ -2.69
LDB18
Q07887
YML054C-A
YML054C-A
159 nt
-1.73
□□□□□ -2.69
LDB18
Q07887
YNL205C
YNL205C
423 nt
-1.73
□□□□□ -2.69
LDB18
Q07887
YBR182C-A
YBR182C-A
195 nt
-1.74
□□□□□ -2.69
LDB18
Q07887
YBR178W
YBR178W
375 nt
-1.75
□□□□□ -2.69
LDB18
Q07887
snR77
snR77
88 nt
-1.77
□□□□□ -2.69
LDB18
Q07887
YDR183C-A
YDR183C-A
258 nt
-1.77
□□□□□ -2.69
LDB18
Q07887
YJR157W
YJR157W
363 nt
-1.78
□□□□□ -2.69
LDB18
Q07887
YOR329W-A
YOR329W-A
210 nt
-1.78
□□□□□ -2.69
LDB18
Q07887
YBR131C-A
YBR131C-A
90 nt
-1.78
□□□□□ -2.69
LDB18
Q07887
YDL159C-B
YDL159C-B
177 nt
-1.81
□□□□□ -2.7
LDB18
Q07887
YGR240C-A
YGR240C-A
201 nt
-1.81
□□□□□ -2.7
LDB18
Q07887
tF(GAA)Q
tF(GAA)Q
75 nt
-1.87
□□□□□ -2.71
LDB18
Q07887
snR81
snR81
201 nt
-1.89
□□□□□ -2.71
LDB18
Q07887
YAL016C-B
YAL016C-B
186 nt
-1.89
□□□□□ -2.71
LDB18
Q07887
YMR315W-A
YMR315W-A
108 nt
-1.89
□□□□□ -2.71
LDB18
Q07887
YPL038W-A
YPL038W-A
192 nt
-1.94
□□□□□ -2.72
LDB18
Q07887
YPR197C
YPR197C
564 nt
-1.95
□□□□□ -2.72
LDB18
Q07887
YER181C
YER181C
324 nt
-1.96
□□□□□ -2.72
LDB18
Q07887
YLR222C-A
YLR222C-A
231 nt
-1.97
□□□□□ -2.72
LDB18
Q07887
YBR126W-B
YBR126W-B
144 nt
-2.02
□□□□□ -2.73
LDB18
Q07887
YLR299C-A
YLR299C-A
93 nt
-2.03
□□□□□ -2.73
LDB18
Q07887
YNL097C-B
YNL097C-B
123 nt
-2.03
□□□□□ -2.73
LDB18
Q07887
YOR376W-A
YOR376W-A
156 nt
-2.04
□□□□□ -2.74
LDB18
Q07887
YDR413C
YDR413C
576 nt
-2.06
□□□□□ -2.74
LDB18
Q07887
YNL277W-A
YNL277W-A
189 nt
-2.06
□□□□□ -2.74
LDB18
Q07887
YBR196C-A
YBR196C-A
150 nt
-2.08
□□□□□ -2.74
LDB18
Q07887
snR55
snR55
98 nt
-2.09
□□□□□ -2.74
LDB18
Q07887
RPL39
YJL189W
156 nt
-2.1
□□□□□ -2.75
LDB18
Q07887
tL(UAA)Q
tL(UAA)Q
85 nt
-2.12
□□□□□ -2.75
LDB18
Q07887
YGL188C-A
YGL188C-A
141 nt
-2.12
□□□□□ -2.75
LDB18
Q07887
YDR157W
YDR157W
402 nt
-2.13
□□□□□ -2.75
LDB18
Q07887
YOR102W
YOR102W
351 nt
-2.13
□□□□□ -2.75
LDB18
Q07887
snR48
snR48
113 nt
-2.13
□□□□□ -2.75
LDB18
Q07887
YKL118W
YKL118W
312 nt
-2.18
□□□□□ -2.76
LDB18
Q07887
YDL240C-A
YDL240C-A
138 nt
-2.2
□□□□□ -2.76
LDB18
Q07887
YOR309C
YOR309C
381 nt
-2.21
□□□□□ -2.76
LDB18
Q07887
YOR302W
YOR302W
78 nt
-2.22
□□□□□ -2.76
LDB18
Q07887
YHR180C-B
YHR180C-B
105 nt
-2.27
□□□□□ -2.77
LDB18
Q07887
YOL155W-A
YOL155W-A
135 nt
-2.28
□□□□□ -2.77
LDB18
Q07887
snR52
snR52
92 nt
-2.28
□□□□□ -2.77
LDB18
Q07887
YDR118W-A
YDR118W-A
117 nt
-2.3
□□□□□ -2.78
LDB18
Q07887
YOR316C-A
YOR316C-A
210 nt
-2.3
□□□□□ -2.78
LDB18
Q07887
YHL015W-A
YHL015W-A
84 nt
-2.34
□□□□□ -2.78
LDB18
Q07887
YPR012W
YPR012W
255 nt
-2.34
□□□□□ -2.78
LDB18
Q07887
Q0017
Q0017
162 nt
-2.34
□□□□□ -2.78
LDB18
Q07887
GIM4
YEL003W
336 nt
-2.35
□□□□□ -2.79
LDB18
Q07887
YKL106C-A
YKL106C-A
120 nt
-2.35
□□□□□ -2.79
LDB18
Q07887
YLR342W-A
YLR342W-A
174 nt
-2.38
□□□□□ -2.79
LDB18
Q07887
YJL150W
YJL150W
303 nt
-2.41
□□□□□ -2.8
LDB18
Q07887
YPL152W-A
YPL152W-A
99 nt
-2.45
□□□□□ -2.8
LDB18
Q07887
VAR1
Q0140
1197 nt
-2.5
□□□□□ -2.81
LDB18
Q07887
YDR543C
YDR543C
300 nt
-2.53
□□□□□ -2.81
LDB18
Q07887
YBR109W-A
YBR109W-A
225 nt
-2.53
□□□□□ -2.81
LDB18
Q07887
YNL198C
YNL198C
303 nt
-2.55
□□□□□ -2.82
LDB18
Q07887
snR65
snR65
100 nt
-2.58
□□□□□ -2.82
LDB18
Q07887
YDR524W-C
YDR524W-C
90 nt
-2.59
□□□□□ -2.82
LDB18
Q07887
SOM1
YEL059C-A
225 nt
-2.62
□□□□□ -2.83
LDB18
Q07887
YBR296C-A
YBR296C-A
120 nt
-2.62
□□□□□ -2.83
LDB18
Q07887
snR56
snR56
88 nt
-2.64
□□□□□ -2.83
LDB18
Q07887
RPL41A
YDL184C
78 nt
-2.64
□□□□□ -2.83
LDB18
Q07887
snR6
snR6
112 nt
-2.65
□□□□□ -2.83
LDB18
Q07887
snR80
snR80
171 nt
-2.66
□□□□□ -2.84
LDB18
Q07887
YBL053W
YBL053W
375 nt
-2.67
□□□□□ -2.84
LDB18
Q07887
YOL083C-A
YOL083C-A
141 nt
-2.69
□□□□□ -2.84
LDB18
Q07887
snR38
snR38
95 nt
-2.69
□□□□□ -2.84
LDB18
Q07887
YOR335W-A
YOR335W-A
81 nt
-2.77
□□□□□ -2.85
LDB18
Q07887
YCR095W-A
YCR095W-A
159 nt
-2.81
□□□□□ -2.86
LDB18
Q07887
snR73
snR73
106 nt
-2.82
□□□□□ -2.86
LDB18
Q07887
YDR406W-A
YDR406W-A
246 nt
-2.85
□□□□□ -2.87
LDB18
Q07887
YBL071C-B
YBL071C-B
99 nt
-2.85
□□□□□ -2.87
LDB18
Q07887
YGR151C
YGR151C
336 nt
-2.88
□□□□□ -2.87
LDB18
Q07887
YOR231C-A
YOR231C-A
201 nt
-2.89
□□□□□ -2.87
LDB18
Q07887
RPL41B
YDL133C-A
78 nt
-2.91
□□□□□ -2.88
LDB18
Q07887
YOL164W-A
YOL164W-A
183 nt
-2.92
□□□□□ -2.88
LDB18
Q07887
Q0142
Q0142
177 nt
-2.93
□□□□□ -2.88
LDB18
Q07887
YOL166W-A
YOL166W-A
156 nt
-2.95
□□□□□ -2.88
LDB18
Q07887
snR47
snR47
99 nt
-2.97
□□□□□ -2.88
LDB18
Q07887
YHR175W-A
YHR175W-A
150 nt
-3.03
□□□□□ -2.89
LDB18
Q07887
YAL037C-A
YAL037C-A
93 nt
-3.13
□□□□□ -2.91
LDB18
Q07887
tR(ACG)Q2
tR(ACG)Q2
74 nt
-3.14
□□□□□ -2.91
LDB18
Q07887
tV(UAC)Q
tV(UAC)Q
76 nt
-3.17
□□□□□ -2.92
LDB18
Q07887
YDL114W-A
YDL114W-A
114 nt
-3.18
□□□□□ -2.92
LDB18
Q07887
YBL100W-C
YBL100W-C
120 nt
-3.18
□□□□□ -2.92
LDB18
Q07887
YDR524C-A
YDR524C-A
120 nt
-3.23
□□□□□ -2.93
LDB18
Q07887
snR85
snR85
171 nt
-3.24
□□□□□ -2.93
LDB18
Q07887
tS(GCU)Q1
tS(GCU)Q1
86 nt
-3.24
□□□□□ -2.93
LDB18
Q07887
YKL225W
YKL225W
348 nt
-3.24
□□□□□ -2.93
LDB18
Q07887
YCL001W-B
YCL001W-B
255 nt
-3.24
□□□□□ -2.93
LDB18
Q07887
Q0144
Q0144
330 nt
-3.27
□□□□□ -2.93
LDB18
Q07887
SPG3
YDR504C
384 nt
-3.3
□□□□□ -2.94
LDB18
Q07887
YMR046W-A
YMR046W-A
129 nt
-3.44
□□□□□ -2.96
LDB18
Q07887
YJR162C
YJR162C
351 nt
-3.49
□□□□□ -2.97
LDB18
Q07887
YNL337W
YNL337W
255 nt
-3.49
□□□□□ -2.97
LDB18
Q07887
YDL159W-A
YDL159W-A
132 nt
-3.57
□□□□□ -2.98
LDB18
Q07887
snR87
snR87
109 nt
-3.57
□□□□□ -2.98
LDB18
Q07887
YGR122C-A
YGR122C-A
129 nt
-3.59
□□□□□ -2.98
LDB18
Q07887
YDR034C-A
YDR034C-A
177 nt
-3.66
□□□□□ -3
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Retrieved 100 of 7,029 protein–RNA pairs in 85.8 ms