Protein–RNA interactions for Protein: Q04487

SHH3, Mitochondrial inner membrane protein SHH3, yeastyeast

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHH3Q04487 YDL240C-AYDL240C-A 138 nt-1.04□□□□□ -2.58
SHH3Q04487 RPL39YJL189W 156 nt-1.04□□□□□ -2.58
SHH3Q04487 tM(CAU)Q2tM(CAU)Q2 78 nt-1.05□□□□□ -2.58
SHH3Q04487 YNL277W-AYNL277W-A 189 nt-1.06□□□□□ -2.58
SHH3Q04487 YFL019CYFL019C 354 nt-1.07□□□□□ -2.58
SHH3Q04487 RDS3YPR094W 324 nt-1.07□□□□□ -2.58
SHH3Q04487 YBR131C-AYBR131C-A 90 nt-1.07□□□□□ -2.58
SHH3Q04487 PMP2YEL017C-A 132 nt-1.09□□□□□ -2.58
SHH3Q04487 YER181CYER181C 324 nt-1.09□□□□□ -2.58
SHH3Q04487 YKL118WYKL118W 312 nt-1.1□□□□□ -2.59
SHH3Q04487 YGR146C-AYGR146C-A 162 nt-1.11□□□□□ -2.59
SHH3Q04487 snR39BsnR39B 96 nt-1.11□□□□□ -2.59
SHH3Q04487 JLP2YMR132C 627 nt-1.13□□□□□ -2.59
SHH3Q04487 YBR223W-AYBR223W-A 120 nt-1.13□□□□□ -2.59
SHH3Q04487 YPR012WYPR012W 255 nt-1.14□□□□□ -2.59
SHH3Q04487 YNL097C-BYNL097C-B 123 nt-1.17□□□□□ -2.6
SHH3Q04487 YOR329W-AYOR329W-A 210 nt-1.17□□□□□ -2.6
SHH3Q04487 GIM4YEL003W 336 nt-1.18□□□□□ -2.6
SHH3Q04487 snR55snR55 98 nt-1.2□□□□□ -2.6
SHH3Q04487 snR67snR67 82 nt-1.22□□□□□ -2.6
SHH3Q04487 tD(GUC)QtD(GUC)Q 75 nt-1.24□□□□□ -2.61
SHH3Q04487 SKI7YOR076C 2244 nt-1.26□□□□□ -2.61
SHH3Q04487 YLR286W-AYLR286W-A 135 nt-1.28□□□□□ -2.61
SHH3Q04487 tP(UGG)QtP(UGG)Q 72 nt-1.29□□□□□ -2.62
SHH3Q04487 YBR178WYBR178W 375 nt-1.29□□□□□ -2.62
SHH3Q04487 Q0144Q0144 330 nt-1.32□□□□□ -2.62
SHH3Q04487 YOR302WYOR302W 78 nt-1.33□□□□□ -2.62
SHH3Q04487 YOL155W-AYOL155W-A 135 nt-1.34□□□□□ -2.62
SHH3Q04487 YDL159C-BYDL159C-B 177 nt-1.35□□□□□ -2.63
SHH3Q04487 YNL205CYNL205C 423 nt-1.35□□□□□ -2.63
SHH3Q04487 snR48snR48 113 nt-1.37□□□□□ -2.63
SHH3Q04487 YPL152W-AYPL152W-A 99 nt-1.38□□□□□ -2.63
SHH3Q04487 snR65snR65 100 nt-1.42□□□□□ -2.64
SHH3Q04487 tL(UAA)QtL(UAA)Q 85 nt-1.42□□□□□ -2.64
SHH3Q04487 YNR077CYNR077C 255 nt-1.44□□□□□ -2.64
SHH3Q04487 YML054C-AYML054C-A 159 nt-1.46□□□□□ -2.64
SHH3Q04487 YGL188C-AYGL188C-A 141 nt-1.47□□□□□ -2.64
SHH3Q04487 YOR102WYOR102W 351 nt-1.48□□□□□ -2.65
SHH3Q04487 snR52snR52 92 nt-1.5□□□□□ -2.65
SHH3Q04487 YLR299C-AYLR299C-A 93 nt-1.53□□□□□ -2.65
SHH3Q04487 YLR342W-AYLR342W-A 174 nt-1.55□□□□□ -2.66
SHH3Q04487 CDC65tQ(CUG)M 72 nt-1.56□□□□□ -2.66
SHH3Q04487 YHL015W-AYHL015W-A 84 nt-1.57□□□□□ -2.66
SHH3Q04487 YHR175W-AYHR175W-A 150 nt-1.57□□□□□ -2.66
SHH3Q04487 YBR196C-AYBR196C-A 150 nt-1.57□□□□□ -2.66
SHH3Q04487 YGR240C-AYGR240C-A 201 nt-1.6□□□□□ -2.67
SHH3Q04487 snR77snR77 88 nt-1.61□□□□□ -2.67
SHH3Q04487 snR80snR80 171 nt-1.63□□□□□ -2.67
SHH3Q04487 YOR231C-AYOR231C-A 201 nt-1.66□□□□□ -2.68
SHH3Q04487 tR(ACG)Q2tR(ACG)Q2 74 nt-1.67□□□□□ -2.68
SHH3Q04487 tY(GUA)QtY(GUA)Q 84 nt-1.68□□□□□ -2.68
SHH3Q04487 snR56snR56 88 nt-1.72□□□□□ -2.68
SHH3Q04487 YOR376W-AYOR376W-A 156 nt-1.72□□□□□ -2.68
SHH3Q04487 YMR315W-AYMR315W-A 108 nt-1.77□□□□□ -2.69
SHH3Q04487 YNL198CYNL198C 303 nt-1.78□□□□□ -2.69
SHH3Q04487 YHR180C-BYHR180C-B 105 nt-1.79□□□□□ -2.7
SHH3Q04487 snR81snR81 201 nt-1.8□□□□□ -2.7
SHH3Q04487 YJL150WYJL150W 303 nt-1.83□□□□□ -2.7
SHH3Q04487 YDR406W-AYDR406W-A 246 nt-1.86□□□□□ -2.71
SHH3Q04487 YBL053WYBL053W 375 nt-1.86□□□□□ -2.71
SHH3Q04487 SOM1YEL059C-A 225 nt-1.88□□□□□ -2.71
SHH3Q04487 YDR524W-CYDR524W-C 90 nt-1.89□□□□□ -2.71
SHH3Q04487 YOR316C-AYOR316C-A 210 nt-1.93□□□□□ -2.72
SHH3Q04487 YKL106C-AYKL106C-A 120 nt-1.94□□□□□ -2.72
SHH3Q04487 YCR095W-AYCR095W-A 159 nt-2.02□□□□□ -2.73
SHH3Q04487 YBR109W-AYBR109W-A 225 nt-2.04□□□□□ -2.74
SHH3Q04487 YBR296C-AYBR296C-A 120 nt-2.07□□□□□ -2.74
SHH3Q04487 YBR126W-BYBR126W-B 144 nt-2.09□□□□□ -2.74
SHH3Q04487 RPL41AYDL184C 78 nt-2.1□□□□□ -2.75
SHH3Q04487 YOR309CYOR309C 381 nt-2.1□□□□□ -2.75
SHH3Q04487 snR38snR38 95 nt-2.16□□□□□ -2.76
SHH3Q04487 YGR151CYGR151C 336 nt-2.17□□□□□ -2.76
SHH3Q04487 YOL083C-AYOL083C-A 141 nt-2.17□□□□□ -2.76
SHH3Q04487 YBL071C-BYBL071C-B 99 nt-2.19□□□□□ -2.76
SHH3Q04487 YMR046W-AYMR046W-A 129 nt-2.24□□□□□ -2.77
SHH3Q04487 YOL164W-AYOL164W-A 183 nt-2.29□□□□□ -2.78
SHH3Q04487 SPG3YDR504C 384 nt-2.32□□□□□ -2.78
SHH3Q04487 YAL037C-AYAL037C-A 93 nt-2.37□□□□□ -2.79
SHH3Q04487 snR47snR47 99 nt-2.37□□□□□ -2.79
SHH3Q04487 YCL001W-BYCL001W-B 255 nt-2.37□□□□□ -2.79
SHH3Q04487 snR6snR6 112 nt-2.39□□□□□ -2.79
SHH3Q04487 YBL100W-CYBL100W-C 120 nt-2.47□□□□□ -2.8
SHH3Q04487 YOR335W-AYOR335W-A 81 nt-2.49□□□□□ -2.81
SHH3Q04487 tM(CAU)Q1tM(CAU)Q1 76 nt-2.53□□□□□ -2.81
SHH3Q04487 YLR466C-BYLR466C-B 117 nt-2.53□□□□□ -2.81
SHH3Q04487 snR73snR73 106 nt-2.56□□□□□ -2.82
SHH3Q04487 YDR543CYDR543C 300 nt-2.58□□□□□ -2.82
SHH3Q04487 RPL41BYDL133C-A 78 nt-2.61□□□□□ -2.83
SHH3Q04487 tS(GCU)Q1tS(GCU)Q1 86 nt-2.62□□□□□ -2.83
SHH3Q04487 YKL225WYKL225W 348 nt-2.62□□□□□ -2.83
SHH3Q04487 YNL337WYNL337W 255 nt-2.62□□□□□ -2.83
SHH3Q04487 YNL338WYNL338W 159 nt-2.63□□□□□ -2.83
SHH3Q04487 Q0142Q0142 177 nt-2.64□□□□□ -2.83
SHH3Q04487 YDL114W-AYDL114W-A 114 nt-2.68□□□□□ -2.84
SHH3Q04487 tV(UAC)QtV(UAC)Q 76 nt-2.68□□□□□ -2.84
SHH3Q04487 snR85snR85 171 nt-2.82□□□□□ -2.86
SHH3Q04487 YGL041C-BYGL041C-B 183 nt-2.89□□□□□ -2.87
SHH3Q04487 YDR034C-AYDR034C-A 177 nt-2.93□□□□□ -2.88
SHH3Q04487 YGL007C-AYGL007C-A 87 nt-2.99□□□□□ -2.89
SHH3Q04487 YGR122C-AYGR122C-A 129 nt-2.99□□□□□ -2.89
Retrieved 100 of 7,029 protein–RNA pairs in 27.5 ms