Protein–RNA interactions for Protein: Q03012

SPP1, COMPASS component SPP1, yeastyeast

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPP1Q03012 PEP1YBL017C 4740 nt2.08□□□□□ -2.08
SPP1Q03012 NEO1YIL048W 3456 nt2.08□□□□□ -2.08
SPP1Q03012 SWI4YER111C 3282 nt2.07□□□□□ -2.08
SPP1Q03012 MYO1YHR023W 5787 nt2.06□□□□□ -2.08
SPP1Q03012 YGR130CYGR130C 2451 nt2.05□□□□□ -2.08
SPP1Q03012 YHR214C-BYHR214C-B 5382 nt2.05□□□□□ -2.08
SPP1Q03012 BST1YFL025C 3090 nt2.03□□□□□ -2.08
SPP1Q03012 TRM732YMR259C 4263 nt2.02□□□□□ -2.09
SPP1Q03012 SPP41YDR464W 4308 nt2.02□□□□□ -2.09
SPP1Q03012 NUP145YGL092W 3954 nt2.01□□□□□ -2.09
SPP1Q03012 YOR316C-AYOR316C-A 210 nt2□□□□□ -2.09
SPP1Q03012 LAA1YJL207C 6045 nt2□□□□□ -2.09
SPP1Q03012 SEC31YDL195W 3822 nt1.99□□□□□ -2.09
SPP1Q03012 FKS1YLR342W 5631 nt1.98□□□□□ -2.09
SPP1Q03012 TMA7YLR262C-A 195 nt1.97□□□□□ -2.09
SPP1Q03012 YMR272W-BYMR272W-B 108 nt1.97□□□□□ -2.09
SPP1Q03012 FAB1YFR019W 6837 nt1.96□□□□□ -2.1
SPP1Q03012 SPT7YBR081C 3999 nt1.95□□□□□ -2.1
SPP1Q03012 YMR045CYMR045C 5268 nt1.93□□□□□ -2.1
SPP1Q03012 VAM6YDL077C 3150 nt1.92□□□□□ -2.1
SPP1Q03012 YPR117WYPR117W 7470 nt1.92□□□□□ -2.1
SPP1Q03012 YOR093CYOR093C 4947 nt1.91□□□□□ -2.1
SPP1Q03012 CDC39YCR093W 6327 nt1.9□□□□□ -2.11
SPP1Q03012 SBH2YER019C-A 267 nt1.89□□□□□ -2.11
SPP1Q03012 DNF3YMR162C 4971 nt1.87□□□□□ -2.11
SPP1Q03012 NUP188YML103C 4968 nt1.87□□□□□ -2.11
SPP1Q03012 tC(GCA)QtC(GCA)Q 76 nt1.86□□□□□ -2.11
SPP1Q03012 MON2YNL297C 4911 nt1.85□□□□□ -2.11
SPP1Q03012 PMD1YER132C 5262 nt1.84□□□□□ -2.11
SPP1Q03012 FIG2YCR089W 4830 nt1.81□□□□□ -2.12
SPP1Q03012 SSK2YNR031C 4740 nt1.81□□□□□ -2.12
SPP1Q03012 tT(UGU)HtT(UGU)H 72 nt1.8□□□□□ -2.12
SPP1Q03012 CFT1YDR301W 4074 nt1.8□□□□□ -2.12
SPP1Q03012 BRR2YER172C 6492 nt1.78□□□□□ -2.12
SPP1Q03012 VPS15YBR097W 4365 nt1.77□□□□□ -2.13
SPP1Q03012 YMR247W-AYMR247W-A 144 nt1.76□□□□□ -2.13
SPP1Q03012 YOL014WYOL014W 375 nt1.65□□□□□ -2.15
SPP1Q03012 YOR192C-BYOR192C-B 5313 nt1.64□□□□□ -2.15
SPP1Q03012 RPL41BYDL133C-A 78 nt1.63□□□□□ -2.15
SPP1Q03012 IRA1YBR140C 9279 nt1.6□□□□□ -2.15
SPP1Q03012 MEC1YBR136W 7107 nt1.59□□□□□ -2.15
SPP1Q03012 CCH1YGR217W 6120 nt1.54□□□□□ -2.16
SPP1Q03012 BUD3YCL014W 4911 nt1.51□□□□□ -2.17
SPP1Q03012 YML100W-AYML100W-A 174 nt1.5□□□□□ -2.17
SPP1Q03012 YJL113WYJL113W 4647 nt1.5□□□□□ -2.17
SPP1Q03012 YBL100W-BYBL100W-B 5313 nt1.49□□□□□ -2.17
SPP1Q03012 HKR1YDR420W 5409 nt1.48□□□□□ -2.17
SPP1Q03012 YKL145W-AYKL145W-A 93 nt1.46□□□□□ -2.18
SPP1Q03012 RKR1YMR247C 4689 nt1.44□□□□□ -2.18
SPP1Q03012 tH(GUG)E1tH(GUG)E1 72 nt1.43□□□□□ -2.18
SPP1Q03012 tH(GUG)E2tH(GUG)E2 72 nt1.43□□□□□ -2.18
SPP1Q03012 tH(GUG)G1tH(GUG)G1 72 nt1.43□□□□□ -2.18
SPP1Q03012 tH(GUG)G2tH(GUG)G2 72 nt1.43□□□□□ -2.18
SPP1Q03012 tH(GUG)HtH(GUG)H 72 nt1.43□□□□□ -2.18
SPP1Q03012 tH(GUG)KtH(GUG)K 72 nt1.43□□□□□ -2.18
SPP1Q03012 tH(GUG)MtH(GUG)M 72 nt1.43□□□□□ -2.18
SPP1Q03012 YJR029WYJR029W 5268 nt1.42□□□□□ -2.18
SPP1Q03012 snR58snR58 96 nt1.41□□□□□ -2.18
SPP1Q03012 YOR335W-AYOR335W-A 81 nt1.41□□□□□ -2.18
SPP1Q03012 LTE1YAL024C 4308 nt1.4□□□□□ -2.19
SPP1Q03012 IML1YJR138W 4755 nt1.39□□□□□ -2.19
SPP1Q03012 tQ(UUG)E2tQ(UUG)E2 72 nt1.38□□□□□ -2.19
SPP1Q03012 ESP1YGR098C 4893 nt1.36□□□□□ -2.19
SPP1Q03012 PAU24YBR301W 363 nt1.34□□□□□ -2.19
SPP1Q03012 YPR137C-BYPR137C-B 5268 nt1.34□□□□□ -2.2
SPP1Q03012 THO2YNL139C 4794 nt1.34□□□□□ -2.2
SPP1Q03012 snR6snR6 112 nt1.33□□□□□ -2.2
SPP1Q03012 FMP27YLR454W 7887 nt1.27□□□□□ -2.21
SPP1Q03012 tV(UAC)BtV(UAC)B 74 nt1.25□□□□□ -2.21
SPP1Q03012 tV(UAC)DtV(UAC)D 74 nt1.25□□□□□ -2.21
SPP1Q03012 SCC2YDR180W 4482 nt1.23□□□□□ -2.21
SPP1Q03012 snR73snR73 106 nt1.16□□□□□ -2.22
SPP1Q03012 DOP1YDR141C 5097 nt1.13□□□□□ -2.23
SPP1Q03012 BEM2YER155C 6504 nt1.11□□□□□ -2.23
SPP1Q03012 MLP1YKR095W 5628 nt1.11□□□□□ -2.23
SPP1Q03012 IQG1YPL242C 4488 nt1.1□□□□□ -2.23
SPP1Q03012 YOR186C-AYOR186C-A 210 nt1.08□□□□□ -2.24
SPP1Q03012 tF(GAA)BtF(GAA)B 73 nt1.06□□□□□ -2.24
SPP1Q03012 tF(GAA)FtF(GAA)F 73 nt1.06□□□□□ -2.24
SPP1Q03012 tF(GAA)GtF(GAA)G 73 nt1.06□□□□□ -2.24
SPP1Q03012 tF(GAA)H1tF(GAA)H1 73 nt1.06□□□□□ -2.24
SPP1Q03012 tF(GAA)H2tF(GAA)H2 73 nt1.06□□□□□ -2.24
SPP1Q03012 tF(GAA)MtF(GAA)M 73 nt1.06□□□□□ -2.24
SPP1Q03012 tF(GAA)P1tF(GAA)P1 73 nt1.06□□□□□ -2.24
SPP1Q03012 tF(GAA)P2tF(GAA)P2 73 nt1.06□□□□□ -2.24
SPP1Q03012 PAU9YBL108C-A 129 nt1.06□□□□□ -2.24
SPP1Q03012 EMT1tM(CAU)D 73 nt1.03□□□□□ -2.24
SPP1Q03012 EMT5tM(CAU)J1 73 nt1.03□□□□□ -2.24
SPP1Q03012 EMT3tM(CAU)J2 73 nt1.03□□□□□ -2.24
SPP1Q03012 EMT4tM(CAU)M 73 nt1.03□□□□□ -2.24
SPP1Q03012 EMT2tM(CAU)O2 73 nt1.03□□□□□ -2.24
SPP1Q03012 YMR272W-AYMR272W-A 114 nt1.01□□□□□ -2.25
SPP1Q03012 UTP20YBL004W 7482 nt0.91□□□□□ -2.26
SPP1Q03012 snR161snR161 161 nt0.9□□□□□ -2.27
SPP1Q03012 tA(UGC)QtA(UGC)Q 76 nt0.79□□□□□ -2.28
SPP1Q03012 tT(AGU)BtT(AGU)B 73 nt0.79□□□□□ -2.28
SPP1Q03012 tT(AGU)CtT(AGU)C 73 nt0.79□□□□□ -2.28
SPP1Q03012 tT(AGU)DtT(AGU)D 73 nt0.79□□□□□ -2.28
SPP1Q03012 tT(AGU)HtT(AGU)H 73 nt0.79□□□□□ -2.28
SPP1Q03012 tT(AGU)I1tT(AGU)I1 73 nt0.79□□□□□ -2.28
Retrieved 100 of 7,029 protein–RNA pairs in 29 ms