Protein–RNA interactions for Protein: P53896

PGA1, GPI mannosyltransferase 2 subunit PGA1, yeastyeast

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PGA1P53896 YGR146C-AYGR146C-A 162 nt-1.39□□□□□ -2.63
PGA1P53896 snR39BsnR39B 96 nt-1.39□□□□□ -2.63
PGA1P53896 YLR222C-AYLR222C-A 231 nt-1.4□□□□□ -2.63
PGA1P53896 YFL019CYFL019C 354 nt-1.41□□□□□ -2.64
PGA1P53896 RPL39YJL189W 156 nt-1.43□□□□□ -2.64
PGA1P53896 tF(GAA)QtF(GAA)Q 75 nt-1.45□□□□□ -2.64
PGA1P53896 YBR131C-AYBR131C-A 90 nt-1.46□□□□□ -2.64
PGA1P53896 snR67snR67 82 nt-1.47□□□□□ -2.64
PGA1P53896 YDR413CYDR413C 576 nt-1.47□□□□□ -2.64
PGA1P53896 YER181CYER181C 324 nt-1.47□□□□□ -2.64
PGA1P53896 tP(UGG)QtP(UGG)Q 72 nt-1.48□□□□□ -2.65
PGA1P53896 YDL240C-AYDL240C-A 138 nt-1.5□□□□□ -2.65
PGA1P53896 YOR329W-AYOR329W-A 210 nt-1.51□□□□□ -2.65
PGA1P53896 YNL277W-AYNL277W-A 189 nt-1.52□□□□□ -2.65
PGA1P53896 tD(GUC)QtD(GUC)Q 75 nt-1.53□□□□□ -2.65
PGA1P53896 YDR118W-AYDR118W-A 117 nt-1.54□□□□□ -2.66
PGA1P53896 YKL118WYKL118W 312 nt-1.55□□□□□ -2.66
PGA1P53896 YLR286W-AYLR286W-A 135 nt-1.55□□□□□ -2.66
PGA1P53896 SKI7YOR076C 2244 nt-1.56□□□□□ -2.66
PGA1P53896 snR55snR55 98 nt-1.58□□□□□ -2.66
PGA1P53896 VAR1Q0140 1197 nt-1.6□□□□□ -2.67
PGA1P53896 YBR178WYBR178W 375 nt-1.6□□□□□ -2.67
PGA1P53896 YNR077CYNR077C 255 nt-1.61□□□□□ -2.67
PGA1P53896 YDL159C-BYDL159C-B 177 nt-1.63□□□□□ -2.67
PGA1P53896 GIM4YEL003W 336 nt-1.64□□□□□ -2.67
PGA1P53896 YNL097C-BYNL097C-B 123 nt-1.66□□□□□ -2.68
PGA1P53896 YNL205CYNL205C 423 nt-1.67□□□□□ -2.68
PGA1P53896 YPR012WYPR012W 255 nt-1.7□□□□□ -2.68
PGA1P53896 YML054C-AYML054C-A 159 nt-1.73□□□□□ -2.69
PGA1P53896 YOL155W-AYOL155W-A 135 nt-1.77□□□□□ -2.69
PGA1P53896 snR48snR48 113 nt-1.77□□□□□ -2.69
PGA1P53896 YOR102WYOR102W 351 nt-1.8□□□□□ -2.7
PGA1P53896 tY(GUA)QtY(GUA)Q 84 nt-1.82□□□□□ -2.7
PGA1P53896 YGL188C-AYGL188C-A 141 nt-1.83□□□□□ -2.7
PGA1P53896 YOR302WYOR302W 78 nt-1.83□□□□□ -2.7
PGA1P53896 CDC65tQ(CUG)M 72 nt-1.84□□□□□ -2.7
PGA1P53896 tL(UAA)QtL(UAA)Q 85 nt-1.85□□□□□ -2.71
PGA1P53896 YGR240C-AYGR240C-A 201 nt-1.85□□□□□ -2.71
PGA1P53896 YLR299C-AYLR299C-A 93 nt-1.85□□□□□ -2.71
PGA1P53896 YPL152W-AYPL152W-A 99 nt-1.89□□□□□ -2.71
PGA1P53896 snR52snR52 92 nt-1.9□□□□□ -2.71
PGA1P53896 YBR196C-AYBR196C-A 150 nt-1.91□□□□□ -2.72
PGA1P53896 snR65snR65 100 nt-1.93□□□□□ -2.72
PGA1P53896 YLR342W-AYLR342W-A 174 nt-1.93□□□□□ -2.72
PGA1P53896 snR77snR77 88 nt-1.94□□□□□ -2.72
PGA1P53896 YHL015W-AYHL015W-A 84 nt-1.96□□□□□ -2.72
PGA1P53896 YMR315W-AYMR315W-A 108 nt-2.04□□□□□ -2.74
PGA1P53896 snR81snR81 201 nt-2.06□□□□□ -2.74
PGA1P53896 YOR376W-AYOR376W-A 156 nt-2.07□□□□□ -2.74
PGA1P53896 Q0144Q0144 330 nt-2.09□□□□□ -2.74
PGA1P53896 YHR180C-BYHR180C-B 105 nt-2.13□□□□□ -2.75
PGA1P53896 YHR175W-AYHR175W-A 150 nt-2.18□□□□□ -2.76
PGA1P53896 snR80snR80 171 nt-2.2□□□□□ -2.76
PGA1P53896 YNL198CYNL198C 303 nt-2.23□□□□□ -2.77
PGA1P53896 YJL150WYJL150W 303 nt-2.24□□□□□ -2.77
PGA1P53896 YOR231C-AYOR231C-A 201 nt-2.28□□□□□ -2.77
PGA1P53896 YBR126W-BYBR126W-B 144 nt-2.28□□□□□ -2.77
PGA1P53896 YKL106C-AYKL106C-A 120 nt-2.29□□□□□ -2.78
PGA1P53896 YOR316C-AYOR316C-A 210 nt-2.29□□□□□ -2.78
PGA1P53896 SOM1YEL059C-A 225 nt-2.31□□□□□ -2.78
PGA1P53896 tR(ACG)Q2tR(ACG)Q2 74 nt-2.32□□□□□ -2.78
PGA1P53896 YDR406W-AYDR406W-A 246 nt-2.34□□□□□ -2.78
PGA1P53896 snR56snR56 88 nt-2.36□□□□□ -2.79
PGA1P53896 YBL053WYBL053W 375 nt-2.43□□□□□ -2.8
PGA1P53896 YOR309CYOR309C 381 nt-2.46□□□□□ -2.8
PGA1P53896 YCR095W-AYCR095W-A 159 nt-2.47□□□□□ -2.8
PGA1P53896 YBR109W-AYBR109W-A 225 nt-2.47□□□□□ -2.8
PGA1P53896 YBR296C-AYBR296C-A 120 nt-2.48□□□□□ -2.81
PGA1P53896 RPL41AYDL184C 78 nt-2.5□□□□□ -2.81
PGA1P53896 YDR524W-CYDR524W-C 90 nt-2.56□□□□□ -2.82
PGA1P53896 YOL083C-AYOL083C-A 141 nt-2.65□□□□□ -2.83
PGA1P53896 YGR151CYGR151C 336 nt-2.66□□□□□ -2.84
PGA1P53896 snR38snR38 95 nt-2.67□□□□□ -2.84
PGA1P53896 YBL071C-BYBL071C-B 99 nt-2.71□□□□□ -2.84
PGA1P53896 YOL164W-AYOL164W-A 183 nt-2.77□□□□□ -2.85
PGA1P53896 YMR046W-AYMR046W-A 129 nt-2.83□□□□□ -2.86
PGA1P53896 snR6snR6 112 nt-2.85□□□□□ -2.87
PGA1P53896 snR47snR47 99 nt-2.85□□□□□ -2.87
PGA1P53896 YAL037C-AYAL037C-A 93 nt-2.89□□□□□ -2.87
PGA1P53896 YDR543CYDR543C 300 nt-2.9□□□□□ -2.87
PGA1P53896 YBL100W-CYBL100W-C 120 nt-2.91□□□□□ -2.88
PGA1P53896 YOR335W-AYOR335W-A 81 nt-2.94□□□□□ -2.88
PGA1P53896 YCL001W-BYCL001W-B 255 nt-2.94□□□□□ -2.88
PGA1P53896 SPG3YDR504C 384 nt-2.97□□□□□ -2.88
PGA1P53896 RPL41BYDL133C-A 78 nt-2.98□□□□□ -2.89
PGA1P53896 snR73snR73 106 nt-3.01□□□□□ -2.89
PGA1P53896 YKL225WYKL225W 348 nt-3.14□□□□□ -2.91
PGA1P53896 YDL114W-AYDL114W-A 114 nt-3.17□□□□□ -2.92
PGA1P53896 tM(CAU)Q1tM(CAU)Q1 76 nt-3.18□□□□□ -2.92
PGA1P53896 tS(GCU)Q1tS(GCU)Q1 86 nt-3.19□□□□□ -2.92
PGA1P53896 YLR466C-BYLR466C-B 117 nt-3.19□□□□□ -2.92
PGA1P53896 tV(UAC)QtV(UAC)Q 76 nt-3.22□□□□□ -2.92
PGA1P53896 YNL337WYNL337W 255 nt-3.22□□□□□ -2.92
PGA1P53896 snR85snR85 171 nt-3.27□□□□□ -2.93
PGA1P53896 YNL338WYNL338W 159 nt-3.28□□□□□ -2.93
PGA1P53896 YOL166W-AYOL166W-A 156 nt-3.45□□□□□ -2.96
PGA1P53896 Q0142Q0142 177 nt-3.47□□□□□ -2.96
PGA1P53896 YDR524C-AYDR524C-A 120 nt-3.5□□□□□ -2.97
PGA1P53896 YGL041C-BYGL041C-B 183 nt-3.51□□□□□ -2.97
PGA1P53896 YDR034C-AYDR034C-A 177 nt-3.52□□□□□ -2.97
Retrieved 100 of 7,029 protein–RNA pairs in 7.7 ms